LOCUS BC005414 2833 bp mRNA linear ROD 02-DEC-2006 DEFINITION Mus musculus CD164 antigen, mRNA (cDNA clone MGC:5693 IMAGE:3600535), complete cds. ACCESSION BC005414 VERSION BC005414.1 KEYWORDS MGC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 2833) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2833) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Gilbert Smith, Ph.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 11 Row: l Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 8393786. FEATURES Location/Qualifiers source 1..2833 /organism="Mus musculus" /mol_type="mRNA" /strain="FVB/N" /db_xref="taxon:10090" /clone="MGC:5693 IMAGE:3600535" /tissue_type="Mammary tumor. Metallothionien-TGF alpha model. 10 month old virgin mouse. Taken by biopsy." /clone_lib="NCI_CGAP_Mam1" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2833 /gene="Cd164" /gene_synonym="A115" /gene_synonym="A24" /gene_synonym="MGC-24" /gene_synonym="MSSP" /db_xref="GeneID:53599" /db_xref="MGI:MGI:1859568" CDS 24..617 /gene="Cd164" /gene_synonym="A115" /gene_synonym="A24" /gene_synonym="MGC-24" /gene_synonym="MSSP" /codon_start=1 /product="CD164 antigen" /protein_id="AAH05414.1" /db_xref="GeneID:53599" /db_xref="MGI:MGI:1859568" /translation="MSGSSRRLLWAATCLAVLCVSAAQPNITTLAPNVTEVPTTTTKV VPTTQMPTVLPETCASFNSCVSCVNATFTNNITCFWLHCQEANKTYCANEPLSNCSQV NRTDLCSVIPPTTPVPTNSTAKPTTRPSSPTPTPSVVTSAGTTNTTLTPTSQPERKST FDAASFIGGIVLVLGVQAVIFFLYKFCKSKERNYHTL" BASE COUNT 791 a 600 c 543 g 899 t ORIGIN 1 cggacgcctg ggctgaagac acaatgtcgg gctcctcccg ccgactgctc tgggccgcca 61 cctgcctcgc cgtgctctgc gtctcggccg cgcagcccaa catcaccacc ctggctccca 121 acgtgaccga ggtgccgacc acgaccacca aagtggtccc gacgacgcaa atgcccaccg 181 tgctaccaga aacctgtgcg agcttcaaca gctgtgtttc ctgtgttaat gccaccttta 241 ctaataatat tacctgcttt tggttacatt gccaagaagc aaataagacc tattgtgcaa 301 atgaaccatt aagtaattgt tcccaggtga accgcactga cttgtgttct gtaatacctc 361 ctaccactcc agtgccaacc aattctacag ctaagcccac aactcggcct tcctctccta 421 cacctactcc ctcagttgtc acatcagcag ggacaacaaa taccacactg actccaacct 481 cccagcctga gcggaagtcg acctttgatg cagccagctt cattggaggg atcgtccttg 541 tcttgggtgt gcaggctgta attttctttc tctataagtt ctgcaaatct aaagaacgaa 601 attaccatac tctgtaaaca gacctgttaa attaatgtgg actggcagtt aacttgtgca 661 actcactgaa accaaaatat tgaagaagtc ccacatggaa gacgctgttc caggatcttt 721 acctttccaa aggatgcata caggatattt tggagcatca tcctcgaaga aaagtcagtt 781 aaaccattta gttcatcagg aatatttaaa atattctgca tgaatccgtg tggctgtcgt 841 ctttgtttac catggctgct gctgtgggac tgttttttcc tctgacatgc caaatgtaac 901 ttctgtaagt ggtggagagt gctgtcctgt gtaggcagct tctgactgca gttgaaatgt 961 agtcccctag aatcctaaag gctgttattc tcatcctagt tccaggtgta acttggtggc 1021 cagaattgag aagagtgcca aatgaccacc cgtcaggcag attgagggcc atcacttcaa 1081 acatagatta aatttgttta gcactaaact atccctagag taaattttta tgcttgacaa 1141 gttgtatttt atatattaga aataagatgc cacacagggc aatccagatt tagattaaag 1201 aaaggataca cagacattaa tctgcaacag gtcttgttca tactcataaa gtgtaccgta 1261 ttaagaaatc agaacagtgc cttaagacag actgagacgt cgtgaaaaat gtgttcacac 1321 tgtgggaggc aaagcttggt ctgagaatgt aactgttgat gtgagcagca gaaatctgct 1381 tatagataac atactgttaa tatttaatta aaagcattgt tttttctaga gctgagaaat 1441 agaagctaaa gaataattag agctgaaagg cttccttata tcaaaccatc taacattttt 1501 cttagggctg ttaaactaga cataaaattg atttatcttt ctctctgtac acaaagtatc 1561 caaatattat accttaagga ttcctaccag gttttcttga aaagtggctt ttacatgagg 1621 caagaaggaa gtagttgtag atagaatcat tttctagttc tttaaatgag acaatcactt 1681 tgttttctaa tagatgtgac ctgtgtaact taaaaaatct gagggtttga gagaggttgc 1741 tctagatttc caatgacgat accctggctg aataggcttt tctcttcctt gggcctttac 1801 ttcttttctt cctccttggt ttcagttccc atgtgctatc attataatca tgcagacttt 1861 tacttcagtt gcttctgaaa gcactaagtt ttcagttttg gagttacttc tcccttgcct 1921 ctgacacact gcacacgtct agaggctgta attggaaata ggcttttggt ttcctgtgcc 1981 attcaagttt ggggctttca tttggttaca gagttcagcg cttggttccc agggtttata 2041 tacgaaacag cggattgctg tgggctggtt cataaagtga aactaatgaa tctatctctt 2101 tgtcacttgc tggtacagct agtttgtttc acttgcacat ttgtacatat atctaatgtt 2161 ttcaagtgcc ttacttgttt aaactctgac ttcaaaggtt tttggggaaa gataggttta 2221 cctcacagtt atgtttccat tgtaatttct aggttcctca caaaaatcta tttcagtgct 2281 gtagctgtta gttttaagtg agtgctaaag ttcttttaaa agtacacaga atttccattc 2341 cttataaagg tggcaaaatt ggtttgtcat ttacctccat gtgactcctt gccccatata 2401 aatgtcagca tatgtagcaa gttttctaag aatgtaactt aatttgaagc tcctgaaatt 2461 ttgagcactg ctctaacatt gtaggaagtt agtgacattt tgcaagtctc tacaaaagct 2521 cttgccacag aattcactgc tgccctgact cttcaccatc tttctttagc aaggtatttt 2581 gagccattaa tgattttggg tttttttaat ccagaaggta tataaaagcc ttttcagagt 2641 tttcatctga tttgtcctga ggatctagtt ctatcaaata ccttatttta cctttgccat 2701 acttgctgca caagcagaca ctgctggact tagaagtttc tatttgagtt ccttaaacta 2761 caaaactaat atgtatgtgt accaaactga tttaaaataa atgtttatta gtctcttgaa 2821 aaaaaaaaaa aaa //