LOCUS BC004761 1319 bp mRNA linear ROD 11-AUG-2006 DEFINITION Mus musculus expressed sequence AI428936, mRNA (cDNA clone MGC:7023 IMAGE:3155758), complete cds. ACCESSION BC004761 VERSION BC004761.1 KEYWORDS MGC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 1319) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1319) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lothar Hennighausen Ph.D., Chu-Xia Deng Ph.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 6 Row: c Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 23956369. FEATURES Location/Qualifiers source 1..1319 /organism="Mus musculus" /mol_type="mRNA" /strain="129,C57BL/6J,FVB/N" /db_xref="taxon:10090" /clone="MGC:7023 IMAGE:3155758" /tissue_type="Mammary tumor. Brca1-/fl; MMTV-Cre model. 10 months old, gross tissue." /clone_lib="NCI_CGAP_Mam3" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1319 /gene="AI428936" /gene_synonym="MGC38513" /db_xref="GeneID:233066" /db_xref="MGI:MGI:2141950" CDS 93..1259 /gene="AI428936" /gene_synonym="MGC38513" /codon_start=1 /product="expressed sequence AI428936" /protein_id="AAH04761.2" /db_xref="GeneID:233066" /db_xref="MGI:MGI:2141950" /translation="MALVPPLGREFPPEPVNCPLAAPRELDVVGGTICPAPEEETSRP EQVQASLGLPEQCMGELKSTESATSPSRLPLASSHEHQDGGKPCEHSDSGLEVLEAEQ DSLHLCLLRLNFRLQDLERGLGSWTLAHNRIVQMQALQAELRGAAERVDALLAFGEGL AERSEPRAWASLEQVLRALGTHRDTIFQRLWQLQAQLISYSLVLEKANLLDQDLEVEG DSDGPAAGGVWGPWAPSTFPTPAELEWDPAGDVGGLGPSGQKISRIPGAPCELCGYRG PQSSGQGLEDLLSLGLGHRKHLAAHHRRRLRKPQDRKRQVSPSLPDAMLEVDRGVPAP ASKRPLTLFFLLLFLLLVGATLLLPLSGVSCCSHARLARTPYLVLSYVNGLPPI" BASE COUNT 266 a 384 c 400 g 269 t ORIGIN 1 gtcctgctga gaaagcatgg gggtctggac tgtctaagaa agcggctggt gttactggac 61 atcctcacct gacgatcccc aagtgcacgg ccatggccct ggttccacct cttggccgtg 121 aattcccgcc agagcctgtg aattgtcccc tggcagctcc tagagagctg gatgttgtcg 181 gagggaccat ctgccctgca cctgaggaag agacaagcag gccagagcag gtccaggcct 241 ccttgggcct gcctgagcaa tgcatgggtg aactgaagag cactgagtct gccaccagcc 301 cctcaagact ccccctggcc tcttcccatg agcatcaaga tgggggcaag ccctgtgagc 361 actctgactc tggtttggaa gtactagaag ctgaacagga cagtctacat ctttgtctgt 421 tgaggttgaa cttccggctg caggacctgg aacgaggcct tgggtcttgg acgctggccc 481 acaacaggat tgtccagatg caggccctgc aggcagagct acgaggggcc gctgagcgcg 541 tggatgcatt gcttgcattt ggtgagggcc tggcagagag gagtgagccc agggcctggg 601 catccctgga gcaggtcctg agggcccttg gaacccaccg agacaccatc ttccaacggc 661 tctggcagct gcaggcccag ttgatcagct atagcctggt gcttgagaag gccaacctcc 721 tggaccagga cttggaagtt gagggagact cagacgggcc agcagctggt ggagtctggg 781 ggccctgggc acccagtacc ttccccactc ctgcagagct ggagtgggac ccagcagggg 841 atgttggggg tcttgggccc tcagggcaaa agatatctcg gataccagga gctccctgtg 901 agctgtgtgg ctacagggga ccccagagca gtggacaggg ccttgaggac ctgctctcct 961 tggggcttgg ccaccggaaa catttagcgg ctcaccatcg aaggcggctc cggaagcctc 1021 aggacaggaa gaggcaagta tcccccagtc tgcccgatgc gatgctggaa gtggatcgcg 1081 gggtcccagc tcctgcatcc aagcggcccc tgaccctctt ctttctcctt ctcttcctcc 1141 ttctggtggg tgccacgctg ttgctgccct tgtcgggggt ctcctgctgt tctcatgccc 1201 ggctggccag gacgccctac ctggtgctca gttatgtcaa tggtctccct ccaatctgag 1261 ctcaccatcc cagacacgtg cattaaatgg tcactttcaa gagaaaaaaa aaaaaaaaa //