LOCUS BC004664 1118 bp mRNA linear ROD 15-JUL-2006 DEFINITION Mus musculus COP9 (constitutive photomorphogenic) homolog, subunit 6 (Arabidopsis thaliana), mRNA (cDNA clone MGC:7726 IMAGE:3498214), complete cds. ACCESSION BC004664 VERSION BC004664.1 KEYWORDS MGC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 1118) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1118) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Jeffrey Green M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 9 Row: c Column: 13. FEATURES Location/Qualifiers source 1..1118 /organism="Mus musculus" /mol_type="mRNA" /strain="FVB/N" /db_xref="taxon:10090" /clone="MGC:7726 IMAGE:3498214" /tissue_type="Mammary tumor. C3(1)-Tag model. Infiltrating ductal carcinoma. 5 month old virgin mouse." /clone_lib="NCI_CGAP_Mam6" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1118 /gene="Cops6" /gene_synonym="Sgn3" /gene_synonym="VIP/MOV34" /db_xref="GeneID:26893" /db_xref="MGI:MGI:1349439" CDS 11..985 /gene="Cops6" /gene_synonym="Sgn3" /gene_synonym="VIP/MOV34" /codon_start=1 /product="COP9 (constitutive photomorphogenic) homolog, subunit 6 (Arabidopsis thaliana)" /protein_id="AAH04664.1" /db_xref="GeneID:26893" /db_xref="MGI:MGI:1349439" /translation="MAAAAAAGANGSGGSSGMEVDAAVPSVMASGVTGSVSVALHPLV ILNISDHWIRMRSQEGRPMQVIGALIGKQEGRNIEVMNSFELLSHTVEEKIIIDKEYY YTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDL PVSVFESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENSTVAEHL IAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFKTDF YDQCNDVGLMAYLGTITKTCNTMNQFVNKFNVLYDRQGIGRRMRGLFF" BASE COUNT 298 a 266 c 308 g 246 t ORIGIN 1 cgcggggaaa atggcggcgg cagctgcggc gggggcgaat gggagcggag gcagcagcgg 61 catggaagtg gatgcagcag tccccagcgt gatggcctcc ggagtgactg ggagtgtttc 121 cgtcgctctt catccccttg tcatccttaa catctcagac cattggatcc gcatgcgctc 181 ccaggagggg cggcctatgc aggtgattgg ggctctgatc gggaagcagg aggggcgaaa 241 tatcgaagtg atgaactcct ttgagctgct gtcccacacc gtggaagaga agattatcat 301 tgacaaagaa tattattaca ccaaggagga gcagtttaaa caggttttca aggagctgga 361 gtttctgggt tggtatacca caggggggcc acctgacccc tcagacatcc acgtccataa 421 gcaggtgtgt gagataattg agagtccgct ctttctgaag ttgaacccta tgaccaagca 481 cacagatctt cctgtcagcg tttttgagtc tgtcatcgat ataatcaatg gagaggccac 541 aatgctgttt gctgagctca cttacactct ggccactgag gaagctgaac ggatcggtgt 601 agaccacgtg gcccggatga cagcaacagg cagtggggag aactccactg tggctgaaca 661 cctgatagct cagcatagtg ccatcaagat gctgcacagc cgtgtgaagc tcattttaga 721 atatgtcaag gcctctgaag caggagaggt tcccttcaac catgagatcc tgcgggaggc 781 ctatgcccta tgtcactgtc ttccagttct cagcactgac aagttcaaga cagactttta 841 tgatcaatgc aatgacgtgg ggctcatggc ctacctcggc accatcacca aaacgtgcaa 901 cacaatgaac cagtttgtga acaagttcaa cgtcctctac gaccgacaag gcattggccg 961 gcgaatgcgg ggactgtttt tctgatgatg gttctggaag ggatggtgtg tggggctcag 1021 acagctgttc catggacctg agtaccacat tccctttaga gaaactcatt aataaaagag 1081 cagcccctta gcaaaaaaaa aaaaaaaaaa aaaaaaaa //