LOCUS BC002701 2529 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens ATM interactor, mRNA (cDNA clone IMAGE:3612984),
partial cds.
ACCESSION BC002701
VERSION BC002701.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2529)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2529)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002701.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: o Column: 21.
FEATURES Location/Qualifiers
source 1..2529
/db_xref="H-InvDB:HIT000031110"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3612984"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2529
/gene="ATMIN"
/gene_synonym="ASCIZ"
/gene_synonym="ZNF822"
/db_xref="GeneID:23300"
/db_xref="HGNC:HGNC:29034"
CDS <1..2307
/gene="ATMIN"
/gene_synonym="ASCIZ"
/gene_synonym="ZNF822"
/codon_start=1
/product="ATMIN protein"
/protein_id="AAH02701.2"
/db_xref="GeneID:23300"
/db_xref="HGNC:HGNC:29034"
/translation="QQPAVPAPPAGELIQPSVSELSRAVRTNILCTVRGCGKILPNSP
ALNMHLVKSHRLQDGIVNPTIRKDLKTGPKFYCCPIEGCPRGPERPFSQFSLVKQHFM
KMHAEKKHKCSKCSNSYGTEWDLKRHAEDCGKTFRCTCGCPYASRTALQSHIYRTGHE
IPAEHRDPPSKKRKMENCAQNQKLSNKTIESLNNQPIPRPDTQELEASEIKLEPSFED
SCGSNTDKQTLTTPPRYPQKLLLPKPKVALVKLPVMQFSVMPVFVPTADSSAQPVVLG
VDQGSATGAVHLMPLSVGTLILGLDSEACSLKESLPLFKIANPIAGEPISTGVQVNFG
KSPSNPLQELGNTCQKNSISSINVQTDLSYASQNFIPSAQWATADSSVSSCSQTDLSF
DSQVSLPISVHTQTFLPSSKVTSSIAAQTDAFMDTCFQSGGVSRETQTSGIESPTDDH
VQMDQAGMCGDIFESVHSSYNVATGNIISNSLVAETVTHSLLPQNEPKTLNQDIEKSA
PIINFSAQNSMLPSQNMTDNQTQTIDLLSDLENILSSNLPAQTLDHRSLLSDTNPGPD
TQLPSGPAQNPGIDFDIEEFFSASNIQTQTEESELSTMTTEPVLESLDIETQTDFLLA
DTSAQSYGCRGNSNFLGLEMFDTQTQTDLNFFLDSSPHLPLGSILKHSSFSVSTDSSD
TETQTEGVSTAKNIPALESKVQLNSTETQTMSSGFETLGSLFFTSNETQTAMDDFLLA
DLAWNTMESQFSSVETQTSAEPHTVSNF"
BASE COUNT 735 a 614 c 538 g 642 t
ORIGIN
1 cagcagcccg ctgtccccgc gccgccggcg ggggagctga tccagccgtc ggtgagcgag
61 ctgtcccggg ccgtgcggac caacatcctg tgcaccgtgc gcggctgcgg caagatcctg
121 cccaacagcc ccgcgctcaa catgcaccta gtcaagagcc accgcctgca ggatggcata
181 gtcaatccaa caataagaaa agatttgaaa actggaccga aattctactg ctgtccaatt
241 gaaggctgcc ccagaggccc tgagagaccg ttttctcagt tttctctcgt aaaacagcac
301 tttatgaaaa tgcatgctga gaagaagcac aaatgtagta agtgcagcaa ttcgtacggt
361 acagaatggg acctgaaaag acatgcagag gactgtggca agaccttccg gtgcacatgc
421 ggctgtccct acgccagtag aacagcactg cagtctcaca tctaccgaac tgggcacgag
481 atacctgcag aacacaggga cccacctagt aagaaaagga aaatggaaaa ctgtgcacaa
541 aaccagaagt tatccaacaa gaccattgaa tcattgaaca accaaccaat ccctagacca
601 gacactcaag aactagaagc ttcagaaata aagctagaac catcttttga agactcttgt
661 ggctctaaca ctgacaagca gactcttaca acaccaccga ggtatcctca gaagttgctt
721 ttaccaaagc ccaaagtggc tttggttaaa ctacccgtga tgcagttttc tgtcatgcct
781 gtctttgtgc ctacagccga ctcctcagcc cagcctgtgg tgttaggtgt tgatcagggc
841 tctgccacag gggctgtgca cttaatgccc ttgtcagtag gaaccctgat cctcggccta
901 gattcagagg cttgctctct taaggagagc ctacctcttt tcaaaattgc taatcctatt
961 gctggtgagc caataagtac tggtgttcaa gtgaactttg gtaaaagtcc atctaatcct
1021 ttacaagaac tagggaacac gtgtcaaaag aatagcattt cttcaatcaa cgtgcagaca
1081 gatctgtctt atgcctcaca aaactttata ccttctgcac agtgggccac tgctgattcc
1141 tctgtgtcgt cttgttctca aactgatttg tcgtttgatt ctcaagtgtc tcttcccatt
1201 agtgttcaca ctcagacatt tttgcccagc tctaaggtaa cttcatctat agctgctcag
1261 actgatgcat ttatggacac ctgtttccag tcaggtgggg tctccagaga aactcaaacc
1321 agtgggatag aaagtccaac ggatgaccat gtacagatgg accaagctgg aatgtgcgga
1381 gacatttttg agagtgttca ttcatcatat aatgttgcta caggtaacat tataagcaac
1441 agtttagtag cagagacagt aactcatagt ttgttacctc agaatgagcc taagacttta
1501 aatcaagata ttgagaaatc tgcaccaatt ataaatttca gtgcacagaa tagtatgctt
1561 ccttcacaga acatgacaga taatcagacc caaaccatag atttattaag tgatttggaa
1621 aacatcttgt caagtaatct gcctgcccag acattggatc atcgtagtct tttgtctgac
1681 acaaatcctg gacctgacac ccagctccca tctggcccag cccagaaccc cggaatcgat
1741 tttgatatcg aagagttctt ttcggcctca aatatccaga ctcaaactga agagagtgaa
1801 cttagcacca tgaccaccga gccagtcttg gagtcactgg acatagagac tcaaacggac
1861 ttcttactcg cagatacctc tgctcagtcc tatgggtgta ggggaaattc taacttctta
1921 ggccttgaga tgtttgacac acagacacag acagacttaa actttttctt agacagtagc
1981 cctcatctgc ctctgggaag tattctgaaa cactccagct tttccgtgag tactgattca
2041 tctgacacag agacccaaac tgaaggagtc tccactgcta aaaatatacc tgctctagaa
2101 agcaaagttc agttgaacag tacagaaaca cagaccatga gttctgggtt tgaaaccctg
2161 gggagcttgt tcttcaccag caacgaaact cagacagcaa tggatgactt tcttctggct
2221 gatctggcct ggaacacgat ggagtctcag ttcagctctg tagaaaccca gacttctgcg
2281 gaaccacaca cagtctccaa cttctaaaac taacggtgga gtccatgtgt gaaatggcat
2341 ctaccatttc ctctggatta aaactacgga ctggggacaa cagtattaat tcgattgaat
2401 gtggctgatg atgcagttgc ttagcttctt tgtgtttctt tgccttttgt acttgtaaac
2461 agaaatttgc gtataaatgt gagtgtatta taaagtttga gatgttgatc taaaaaaaaa
2521 aaaaaaaaa
//