LOCUS AY953276 5024 bp DNA linear BCT 28-AUG-2005 DEFINITION Stenotrophomonas maltophilia sarcosine oxidase operon, complete sequence. ACCESSION AY953276 VERSION AY953276.1 KEYWORDS . SOURCE Stenotrophomonas maltophilia ORGANISM Stenotrophomonas maltophilia Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia group. REFERENCE 1 (bases 1 to 5024) AUTHORS Hassan-Abdallah,A., Zhao,G., Eschenbrenner,M., Chen,Z.W., Mathews,F.S. and Jorns,M.S. TITLE Cloning, expression and crystallization of heterotetrameric sarcosine oxidase from Pseudomonas maltophilia JOURNAL Protein Expr. Purif. 43 (1), 33-43 (2005) PUBMED 15922624 REFERENCE 2 (bases 1 to 5024) AUTHORS Eschenbrenner,M. and Jorns,M.S. TITLE Direct Submission JOURNAL Submitted (03-MAR-2005) Department of Biochemistry and Molecular Biology, Drexel University, College of Medicine, 245 N. 15th Street, NCB 10314, Philadelphia, PA 19102, USA FEATURES Location/Qualifiers source 1..5024 /organism="Stenotrophomonas maltophilia" /mol_type="genomic DNA" /db_xref="taxon:40324" /note="formerly Pseudomonas maltophilia" operon 1..5024 /operon="sarcosine oxidase" /function="produces a heterotetramer that catalyzes the oxidative demethylation of sarcosine to yield glycine, hydrogen peroxide and 5,10-methylenetetrahydrofolate" gene 1..1218 /gene="soxB" /allele="Dt" /operon="sarcosine oxidase" CDS 1..1218 /gene="soxB" /allele="Dt" /operon="sarcosine oxidase" /codon_start=1 /transl_table=11 /product="heterotetrameric sarcosine oxidase beta-subunit" /protein_id="AAY34150.1" /translation="MADLLPEHPEFLWANPEPKKSYDAIIVGGGGHGLATAYFLAKNH GITNVAVLEKGWLAGGNMARNTTIIRSNYLWDESAGIYEKSLKLWEQLPEDLEYDFLF SQRGVLNLAHTLGDVRESVRRVEANKLNGVDAEWLDPSQVKEACPIINTSDDIRYPVM GATWQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRGTIH AGKVALAGAGHSSVLAEMAGFELPIQSHPLQALVSELFEPVHPTVVMSNHIHVYVSQA HKGELVMGAGIDSYNGYGQRGAFHVIQEQMAAAVELFPIFARAHVLRTWGGIVDTTMD ASPIISKTPIQNLYVNCGWGTGGFKGTPGAGFTLAHTIANDEPHELNKPFSLERFETG HLIDEHGAAAVAH" gene 1230..1529 /gene="soxD" /allele="Dt" /operon="sarcosine oxidase" CDS 1230..1529 /gene="soxD" /allele="Dt" /operon="sarcosine oxidase" /codon_start=1 /transl_table=11 /product="heterotetrameric sarcosine oxidase delta-subunit" /protein_id="AAY34151.1" /translation="MMLIDCPNCGPRNENEFKYGGEAHVAYPADPHALSDKQWSRYLF YRQNKKGIFAERWVHAAGCRKWFNALRDTVTYEFKAIYPAGAPRPEIHSAEGGTR" gene 1526..4423 /gene="soxA" /allele="Dt" /operon="sarcosine oxidase" CDS 1526..4423 /gene="soxA" /allele="Dt" /operon="sarcosine oxidase" /codon_start=1 /transl_table=11 /product="heterotetrameric sarcosine oxidase alpha-subunit" /protein_id="AAY34152.1" /translation="MSKPQRLSAEQSSRARINREEALSLTVDGAKLSAFRGDTVASAL LANGVRRAGNSLYLDRPRGIFAAGVEEPNALVTVSARHEQDIDESMLPATTVPVTEDL NATLLSGLGVLDPTKDPAYYDHVHVHTDVLVVGAGPAGLAAAREASRSGARVMLLDER AEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVFGSYDANYLIAAQ RRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENNDRPGIMLAGAVRSYL NRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSSISAAAAQAVADGVQVI SGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQRQ GKLDWDTTIHAFVPADAVANQHLAGAMTGRLDTASALSTGAATGAAAATAAGFATVAR TPQALETALGETRPVWLVPSVSGDDAVNYKFHFVDLQRDQTVADVLRATGAGMKSVEH IKRYTSISTANDQGKTSGVAAIGVIAAVLGIENPAAIGTTTFRAPYTPVAFAALAGRN RGDQLDPARITAMHSWHLSHGAEFEDVGQWKRPWYYPQAGETMDQAVYRESKAVRDSV GMLDATTLGKIEIRGKDAAEFLNRIYTNGYTKLKVGMGRYGVMCKADGMIFDDGVTLR LAEDRFLLHTTTGGAADVLDWLEEWLQTEWPDLDVTCTSVTEQLATVAVVGPRSRDVI AKLASTVDVSNEGFKFMAFKDVVLDSGIEARISRISFSGELAFEIAVPAWHGLRVWED VYAAGEEFNITPYGTETMHVLRAEKGFIIVGQDTDGTVTPQDAGMEWVVSKLKDFIGN RSYSRADNAREDRKQLVSVLPVDKSLRLPEGAALVASDALASEGITPMEGWVTSSYDS PNLGRTFGLALIKNGRNRIGEVLKTPVGDQLVDVVVSETVLYDPEGSRRDG" gene 4416..5024 /gene="soxG" /allele="Dt" /operon="sarcosine oxidase" CDS 4416..5024 /gene="soxG" /allele="Dt" /operon="sarcosine oxidase" /codon_start=1 /transl_table=11 /product="heterotetrameric sarcosine oxidase gamma-subunit" /protein_id="AAY34153.1" /translation="MANNTLIETPLRHSPAEHLDTVMDAASVAGRVELREIAFTTQIS LRCAPGTQAHAALAAATGAGLPAKVGEVAGEAQGTAVLWLAPDEFLATSAENTELGGV LSAALGDAPGQVVDLSANRSVLELTGPDAPLVLRKSCPADLHPRAFAVNQAIVTSVAN IPVLLWRTGEQAWRIMPRASFTEHTVHWLVDAMSEFASEAVI" BASE COUNT 984 a 1728 c 1549 g 763 t ORIGIN 1 atggctgatc tgctgcctga gcacccagaa ttcctctggg caaacccgga accgaagaaa 61 tcctatgacg ccatcatcgt tggcggcggc ggccacggcc tggccaccgc atacttcctg 121 gccaagaacc acggcatcac taacgtcgcc gtcttggaaa agggctggct ggccggtgga 181 aatatggccc gcaacaccac catcatccgc tcgaactacc tctgggatga gtcggccggc 241 atctacgaaa agtcgctgaa gctgtgggaa cagctgcccg aggacctgga atacgacttc 301 ctgttctccc agcgcggcgt gctgaacctg gcccacaccc tgggagatgt gcgcgaatcc 361 gtgcgccgcg tcgaagcgaa caagctcaac ggcgtggacg ccgaatggct ggacccatcc 421 caggtcaagg aagcctgccc gatcatcaat acctccgacg acatccgcta cccggtcatg 481 ggcgccacct ggcagccacg cgccggcatc gccaagcacg accacgtagc ctgggccttc 541 gcccgcaagg ccaacgaaat gggcgtggac atcatccaga actgcgaagt caccggcttc 601 atcaaggatg gcgagaaggt caccggcgtg aagaccaccc gcggcaccat ccatgccggg 661 aaggttgcgc tggccggcgc aggccactcc tcggtgctgg cagaaatggc cggcttcgaa 721 ctgccgatcc agtcccaccc gctgcaggct ctggtttcgg aactcttcga accggtgcac 781 ccgacagtgg tcatgtccaa ccacatccac gtctacgtct cccaggccca caagggtgag 841 ctggtcatgg gcgcgggcat cgacagctac aacggctacg gccagcgcgg tgccttccac 901 gtcatccagg agcagatggc cgcggccgtg gaactgttcc cgatcttcgc ccgggcgcac 961 gtgctgcgca cctggggcgg catcgtggac accaccatgg acgcctcgcc gatcatctcc 1021 aagaccccga tccagaacct gtacgtgaac tgcggctggg gcaccggcgg attcaagggc 1081 accccgggcg ccggcttcac cctggcgcac accatcgcga acgacgagcc gcacgagctg 1141 aacaagccgt tcagcctcga acgcttcgaa accggccacc tgatcgacga acacggcgct 1201 gccgccgtcg cacactagga gcaaccacca tgatgctgat tgattgcccg aactgcgggc 1261 cacgaaatga aaacgaattc aagtacgggg gggaagccca cgtggcctac cccgcagatc 1321 cccacgcgct gagcgacaag caatggtccc gctacctgtt ctaccgccag aacaagaagg 1381 gcatcttcgc cgaacgctgg gtccacgccg caggctgccg caagtggttc aacgctctgc 1441 gcgacaccgt cacctatgaa ttcaaggcca tctacccagc cggcgcacca cgtccggaaa 1501 tccacagcgc cgaaggaggc acccgatgag caagccacaa cgcctgagcg ccgagcagag 1561 ctcccgcgct cgcatcaacc gcgaggaagc actttccctc accgttgacg gggccaagct 1621 ttccgccttc cgcggcgaca ccgtagccag cgcactgctg gccaatgggg tgcgcagggc 1681 cggcaactcc ctgtacctgg accgcccgcg cggcatcttc gccgccggag tggaagagcc 1741 caacgcgctg gttaccgtca gtgcccgcca cgagcaggac atcgatgagt cgatgctgcc 1801 agcgaccacc gtcccggtca ccgaagactt gaacgccacc ttgctttcgg gcctgggcgt 1861 actggatccg accaaggatc cggcctacta cgaccacgtc cacgtgcaca ccgatgtgct 1921 cgtggtcggc gccggcccgg caggcctggc cgcggcccgc gaagcctcgc gttccggagc 1981 ccgggtgatg ctgctcgatg agcgcgcaga agccggaggc accttgctgg ataccgccgg 2041 cgagcagatc gatggcatgg acagcagcgc gtggatcgag caggtcacca gcgagctggc 2101 tgaagccgag gagaccaccc acctgcagcg caccaccgtg ttcggctcct acgatgcgaa 2161 ctacctgatc gccgcgcagc gccgcaccgt gcacctggat ggcccatccg gccccggcgt 2221 ctcccgcgaa cgcatctggc acatccgtgc caagcaggta gtcctggcca ccggcgccca 2281 cgaacgtccg atcgtcttcg agaacaacga ccgcccgggc atcatgctcg ccggcgcggt 2341 gcgcagctat ctgaaccgct acggcgtacg tgccggagcg aggatcgcgg tagccaccac 2401 caacgactcg gcctacgagc tggtgcgtga actggccgcc accggcggag ttgttgcggt 2461 catcgatgcc cgctcaagca tttcggccgc cgccgcacag gctgtggctg acggggtcca 2521 ggtcatctcg ggctccgtag tggtggacac cgaagccgat gaaaacggcg aactgtcggc 2581 catcgtggtc gcagagctcg atgaagcacg cgagctgggg ggaacccagc gcttcgaagc 2641 agacgtgctg gccgtggccg gcggcttcaa cccggtagtg cacctgcact cccagcgcca 2701 gggcaagctg gattgggaca ccaccatcca cgccttcgtc ccagccgatg ccgtggccaa 2761 ccagcacctg gccggtgcga tgaccggacg cctcgatacc gccagcgccc tgtccaccgg 2821 cgcagctacc ggcgccgcgg cagctactgc cgccggcttc gccaccgtgg cccgcacccc 2881 gcaggccttg gaaaccgcac tgggcgaaac ccggccggtc tggctggtgc catcggtcag 2941 cggcgatgac gcagtgaact acaagttcca cttcgttgac ctgcagcgcg accaaaccgt 3001 agccgacgta ttgcgcgcca ccggcgccgg catgaagtcg gtggagcaca tcaagcggta 3061 cacctcgatc tccacggcca atgaccaggg caagacctcg ggcgtggcag cgatcggcgt 3121 gatcgccgcg gtactgggca tcgagaaccc ggcggcaatc ggcaccacca ccttccgcgc 3181 accatatacg ccggtggcct tcgcagccct ggccggacgc aaccgcgggg accagctgga 3241 cccggcacgc atcaccgcaa tgcactcctg gcacctgtcc cacggcgccg aattcgaaga 3301 cgtcggacag tggaagcgcc cgtggtacta cccgcaggcc ggggaaacca tggaccaggc 3361 cgtctaccgc gaatccaagg ccgtacgcga ctcggtgggc atgctcgacg ccaccacgct 3421 gggcaagatc gagatccgcg gcaaggacgc ggcagagttc ctgaaccgca tctacaccaa 3481 cggctacacc aagctcaagg tgggcatggg acgctacgga gtgatgtgca aggccgacgg 3541 catgatcttc gatgacggcg tgaccctgcg cctggccgaa gaccgcttct tgctgcacac 3601 caccaccggc ggcgccgccg acgtgctgga ctggctggag gaatggctgc agaccgaatg 3661 gcctgacctc gacgtcacct gcacctcggt aaccgagcag ctggccaccg tagccgtggt 3721 gggaccgcgt tcgcgcgatg tcatcgccaa gctggcctcc actgtggacg tgtccaacga 3781 gggcttcaag ttcatggcct tcaaggacgt ggtgctggac tccggaatcg aagcgcgcat 3841 cagccgcatt tccttctccg gcgaactcgc cttcgaaatc gcggtccctg cctggcacgg 3901 gctgcgcgtc tgggaagatg tgtacgccgc cggcgaggaa ttcaacatca ccccgtacgg 3961 caccgaaacc atgcacgtgc tgcgtgccga aaagggcttc atcatcgtcg gccaagacac 4021 cgacggtacg gtgaccccgc aggatgccgg catggaatgg gttgtttcca agctcaagga 4081 cttcatcggc aaccgctcct actcccgggc cgataacgcc cgcgaggacc gcaagcagct 4141 ggtctcggta ctgccggtgg acaagtccct gcgattgcca gaaggcgccg cgctggtggc 4201 ctcggatgct ctggcaagcg aaggcatcac cccgatggaa ggctgggtca ccagctccta 4261 cgattcgccg aatctgggcc gcaccttcgg cctggcgctg atcaagaacg ggcgcaaccg 4321 catcggtgaa gtgctcaaga ccccggtcgg cgaccagctg gtcgacgtcg tagtctccga 4381 aaccgtcctc tatgacccgg aaggaagccg tcgagatggc taacaacacc ttgattgaaa 4441 ccccgctgcg ccattcacca gcagaacacc tggatacggt catggacgca gccagcgtag 4501 ccggacgtgt ggaactgcgc gaaatcgcgt tcaccaccca gatctcgctg cgttgcgcac 4561 cgggcacgca ggcccatgcg gcattggccg cggccaccgg cgcaggcttg ccagcgaagg 4621 tgggcgaagt tgccggcgag gcacaaggca ccgcggtgct atggctggct ccggatgaat 4681 tcctggccac cagcgcggag aacaccgaac tgggtggcgt gctcagcgcg gcgctgggcg 4741 atgcaccggg acaggtcgtt gacctctcgg ctaaccgcag cgtgctggaa ctgaccggac 4801 cggatgcgcc gctggtgctg cgcaagagct gcccggcgga tctgcacccg cgtgcctttg 4861 cagtgaacca ggcgattgtc acctcggtgg cgaacatccc ggtattgctg tggcgtaccg 4921 gcgagcaggc ctggcggatc atgcctcgcg catcgttcac cgagcacacc gtgcattggc 4981 tggttgatgc catgtccgag ttcgcctcgg aagcagtgat ctag //