LOCUS AY866525 3459 bp DNA linear BCT 26-JUL-2016 DEFINITION Pseudomonas aeruginosa class I integron integrase I (intI) gene, partial cds, metallo-beta-lactamase VIM-4 (blaVIM-4), 6'-N-aminoglycoside acetyltransferase (aacA4), and beta-lactamase OXA-35 (blaOXA-35) genes, complete cds, and QacEdelta1 (qacEdelta1) gene, partial cds. ACCESSION AY866525 VERSION AY866525.1 KEYWORDS . SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 3459) AUTHORS Giske,C.G., Libisch,B., Colinon,C., Scoulica,E., Pagani,L., Fuzi,M., Kronvall,G. and Rossolini,G.M. TITLE Establishing clonal relationships between VIM-1-like metallo-beta-lactamase-producing Pseudomonas aeruginosa strains from four European countries by multilocus sequence typing JOURNAL J. Clin. Microbiol. 44 (12), 4309-4315 (2006) PUBMED 17021059 REFERENCE 2 (bases 1 to 3459) AUTHORS Giske,C.G. and Kronvall,G. TITLE Isolation of an Integron-Borne blaVIM-4 Type Metallo-{beta}-Lactamase Gene from a Carbapenem-Resistant Pseudomonas aeruginosa Clinical Isolate in Sweden JOURNAL Unpublished REFERENCE 3 (bases 1 to 3459) AUTHORS Giske,C.G. and Kronvall,G. TITLE Direct Submission JOURNAL Submitted (28-DEC-2004) Clinical Microbiology, Karolinska Institutet, Karolinska University Hospital L2:02, Stockholm 11326, Sweden FEATURES Location/Qualifiers source 1..3459 /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /db_xref="taxon:287" mobile_element <1..>3459 /mobile_element_type="integron:class I" gene complement(<1..220) /gene="intI" CDS complement(<1..220) /gene="intI" /note="similar to GenBank Accession Number AAR22401.1" /codon_start=1 /transl_table=11 /product="integrase I" /protein_id="AAW62313.1" /translation="MKTATAPLPPLRSVKVLDQLRERIRYLHYSLRTEQAYVHWVRAF IRFHGVRHPATLGSSEVEAFLSWLANERK" misc_feature 356..362 /note="core site" gene 387..1187 /gene="blaVIM-4" CDS 387..1187 /gene="blaVIM-4" /note="class B beta-lactamase (carbapenemase); similar to GenBank Accession Number AAR22402.1" /codon_start=1 /transl_table=11 /product="metallo-beta-lactamase VIM-4" /protein_id="AAW62314.1" /translation="MLKVISSLLVYMTASVMAVASPLAHSGEPSGEYPTVNEIPVGEV RLYQIADGVWSHIATQSFDGAVYPSNGLIVRDGDELLLIDTAWGAKNTAALLAEIEKQ IGLPVTRAVSTHFHDDRVGGVDVLRAAGVATYASPSTRRLAEAEGNEIPTHSLEGLSS SGDAVRFGPVELFYPGAAHSTDNLVVYVPSANVLYGGCAVHELSRTSAGNVADADLAE WPTSVERIQKHYPEAEVVIPGHGLPGGLDLLQHTANVVKAHKNRSVAE" misc_feature 1196..1202 /note="inverse core site" misc_feature 1271..1277 /note="core site" gene 1332..1850 /gene="aacA4" CDS 1332..1850 /gene="aacA4" /note="aminoglycoside modifying enzyme; similar to GenBank Accession Number AAS92349.1" /codon_start=1 /transl_table=11 /product="6'-N-aminoglycoside acetyltransferase" /protein_id="AAW62315.1" /translation="MTEHDLAMLYEWLNRSHIVEWWGGEEARPTLADVQEQYLPSVLA QESVTPYIAMLNGEPIGYAQSYVALGSGDGWWEEETDPGVRGIDQLLANASQLGKGLG TKLVRALVELLFNDPEVTKIQTDPSPSNLRAIRCYEKAGFERQGTVTTPDGPAVYMVQ TRQAFERTRSDA" misc_feature 1845..1851 /note="inverse core site" misc_feature 1910..1916 /note="core site" gene 1931..2731 /gene="blaOXA-35" CDS 1931..2731 /gene="blaOXA-35" /note="class D beta-lactamase; similar to GenBank Accession Number AAK49460.1" /codon_start=1 /transl_table=11 /product="beta-lactamase OXA-35" /protein_id="AAW62316.1" /translation="MKTFAAYVITACLSSTALASSITENTSWNKEFSAEAVNGVFVLC KSSSKSCATNNLARASKEYLPASTFKIPNAIIGLETGVIKNEHQVFKWDGKPRAMKQW ERDLSLRGAIQVSAVPVFQQIAREVGEVRMQKYLKKFSYGNQNISGGIDKFWLEGQLR ISAVNQVEFLESLFLNKLSASKENQLIVKEALVTEAAPEYLVHSKTGFSGVGTESNPG VAWWVGWVEKGTEVYFFAFNMDIDNENKLPLRKSIPTKIMASEGIIGG" misc_feature 2726..2732 /note="inverse core site" misc_feature 2926..2932 /note="core site" gene 3035..>3459 /gene="qacEdelta1" CDS 3035..>3459 /gene="qacEdelta1" /note="similar to GenBank Accession Number AAM08185.1" /codon_start=1 /transl_table=11 /product="QacEdelta1" /protein_id="AAW62317.1" /translation="MKGWLFLVIAIVGEVIATSALKSSEGFTKLAPSAVVIIGYGIAF YFLSLVLKSIPVGVAYAVWSGLGVVIITAIAWLLHGQKLDAWGFVGMGLIIAAFLLAR SARRGKSSPVRCSRSGCAGRRTAHGIRTRPRRRRSGARGS" BASE COUNT 861 a 847 c 930 g 821 t ORIGIN 1 ccttgcgctc gttcgccagc caggacagaa atgcctcgac ttcgctgctg cccaaggttg 61 ccgggtgacg cacaccgtgg aaacggatga aggcacgaac ccagtggaca taagcctgtt 121 cggttcgtaa actgtaatgc aagtagcgta tgcgctcacg caactggtcc agaaccttga 181 ccgaacgcag cggtggtaac ggcgcagtgg cggttttcat ggcttgttat gactgttttt 241 ttgtacagtc tatgcctcgg gcatccaagc agcaagcgcg ttacgccgtg ggtcgatgtt 301 tgatgttatg gagcagcaac gatgttacgc agcagggcag tcgccctaaa acaaagttat 361 gccgcaccca cccctatgga gtcttgatgt taaaagttat tagtagttta ttggtctaca 421 tgaccgcgtc tgtcatggct gtcgcaagtc cgttagccca ttccggggag ccgagtggtg 481 agtatccgac agtcaacgaa attccggtcg gagaggtccg actttaccag attgccgatg 541 gtgtttggtc gcatatcgca acgcagtcgt ttgatggcgc ggtctacccg tccaatggtc 601 tcattgtccg tgatggtgat gagttgcttt tgattgatac agcgtggggt gcgaaaaaca 661 cagcggcact tctcgcggag attgaaaagc aaattggact tcccgtaacg cgtgcagtct 721 ccacgcactt tcatgacgac cgcgtcggcg gcgttgatgt ccttcgggcg gctggggtgg 781 caacgtacgc atcaccgtcg acacgccggc tagccgaggc agaggggaac gagattccca 841 cgcattctct agaaggactc tcatcgagcg gggacgcagt gcgcttcggt ccagtagagc 901 tcttctatcc tggtgctgcg cattcgaccg acaatctggt tgtatacgtc ccgtcagcga 961 acgtgctata cggtggttgt gccgttcatg agttgtcacg cacgtctgcg gggaacgtgg 1021 ccgatgccga tctggctgaa tggcccacct ccgttgagcg gattcaaaaa cactacccgg 1081 aagcagaggt cgtcattccc gggcacggtc taccgggcgg tctagacttg ctccagcaca 1141 cagcgaacgt tgtcaaagca cacaaaaatc gctcagtcgc cgagtagcag atgcggcata 1201 acaaatcgtt ggagcgggac ttttgctacg caggctgcgc ctactccgca aaagcccctc 1261 aactcaggcg gttaggcatc acaaagtaca gcatcgtgac caacagcaac gattccgtca 1321 cactgcgcct catgactgag catgaccttg cgatgctcta tgagtggcta aatcgatctc 1381 atatcgtcga gtggtggggc ggagaagaag cacgcccgac acttgctgac gtacaggaac 1441 agtacttgcc aagcgtttta gcgcaagagt ccgtcactcc atacattgca atgctgaatg 1501 gagagccgat tgggtatgcc cagtcgtacg ttgctcttgg aagcggggac ggatggtggg 1561 aagaagaaac cgatccagga gtacgcggaa tagaccagtt actggcgaat gcatcacaac 1621 tgggcaaagg cttgggaacc aagctggttc gagctctggt tgagttgctg ttcaatgatc 1681 ccgaggtcac caagatccaa acggacccgt cgccgagcaa cttgcgagcg atccgatgct 1741 acgagaaagc ggggtttgag aggcaaggta ccgtaaccac cccagatggt ccagccgtgt 1801 acatggttca aacacgccag gcattcgagc gaacacgcag tgatgcctaa cccttccatc 1861 gagggggacg tccaagggct ggcgcccttg gccgcccctc atgtcaaacg ttagccacca 1921 agaaggtgcc atgaaaacat ttgccgcata tgtaattact gcgtgtcttt caagtacggc 1981 attagctagt tcaattacag aaaatacgtc ttggaacaaa gagttctctg ccgaagccgt 2041 caatggtgtt ttcgtgcttt gtaaaagtag cagtaaatcc tgcgctacca ataacttagc 2101 tcgtgcatca aaggaatatc ttccagcatc aacatttaag atccccaacg caattatcgg 2161 cctagaaact ggtgtcataa agaatgagca tcaggttttc aaatgggacg gaaagccaag 2221 agccatgaaa caatgggaaa gagacttgag cttaagaggg gcaatacaag tttcagcggt 2281 tcccgtattt caacaaatcg ccagagaagt tggcgaagta agaatgcaga aataccttaa 2341 aaaattttca tatggcaacc agaatatcag tggtggcatt gacaaattct ggttggaggg 2401 tcagctaaga atttccgcag ttaatcaagt ggagtttcta gagtctctat ttttaaataa 2461 attgtcagca tcaaaagaaa atcagctaat agtaaaagag gctttggtaa cggaggctgc 2521 gcctgaatat cttgtgcatt caaaaactgg tttttctggt gtgggaactg agtcaaatcc 2581 tggtgtcgca tggtgggttg gttgggttga gaagggaaca gaggtttact ttttcgcctt 2641 taacatggat atagacaacg aaaataagtt gccgctaaga aaatccattc ccaccaaaat 2701 catggcaagt gagggcatca ttggtggcta acaattcgct gcaggcgcga cggccctgac 2761 gggccgcggc ctgagctcaa acgttagatg cactaagcac ataattgctc acagccaaac 2821 tatcaggtca agattcgttc aagccgagat cgcttcgcgg ccgcggagtt gttcggtaaa 2881 ttgtcaaaac gccgcggccg caaagcgctc cggcttaact caggcgttag atgcactaag 2941 cacataattg ctcacagcca aactatcagg tcaagtctgc ttttattatt tttaagcgtg 3001 cataataagc cctacacaaa ttgggagata tatcatgaaa ggctggcttt ttcttgttat 3061 cgcaatagtt ggcgaagtaa tcgcaacatc cgcattaaaa tctagcgagg gctttactaa 3121 gcttgcccct tccgccgttg tcataatcgg ttatggcatc gcattttatt ttctttctct 3181 ggttctgaaa tccatccctg tcggtgttgc ttatgcagtc tggtcgggac tcggcgtcgt 3241 cataattaca gccattgcct ggttgcttca tgggcaaaag cttgatgcgt ggggctttgt 3301 aggtatgggg ctcataattg ctgccttttt gctcgcccga tcagcacggc gtggaaaatc 3361 ttcgccagtt cgatgtagtc gttctggctg cgcgggccgt cgcacagctc acggaattcg 3421 aaccaggcca cgtcgtcgca ggtcaggcgc gcgcggatc //