LOCUS AY823990 2872 bp DNA circular VRL 20-NOV-2014 DEFINITION Torque teno sus virus 1b isolate 1p, complete genome. ACCESSION AY823990 VERSION AY823990.1 KEYWORDS . SOURCE Torque teno sus virus 1b ORGANISM Torque teno sus virus 1b Viruses; Viruses incertae sedis; Anelloviridae; Iotatorquevirus. REFERENCE 1 (bases 1 to 2872) AUTHORS Niel,C., Diniz-Mendes,L. and Devalle,S. TITLE Rolling-circle amplification of Torque teno virus (TTV) complete genomes from human and swine sera and identification of a novel swine TTV genogroup JOURNAL J. Gen. Virol. 86 (PT 5), 1343-1347 (2005) PUBMED 15831945 REFERENCE 2 (bases 1 to 2872) AUTHORS Niel,C., Diniz-Mendes,L. and Devalle,S. TITLE Direct Submission JOURNAL Submitted (12-NOV-2004) Virology, Oswaldo Cruz Institute, Av. Brasil, 4365, Rio de Janeiro, RJ 21045-900, Brazil FEATURES Location/Qualifiers source 1..2872 /organism="Torque teno sus virus 1b" /mol_type="genomic DNA" /isolate="1p" /host="swine" /db_xref="taxon:687387" /geo_loc_name="Brazil" CDS join(428..642,2008..2479) /codon_start=1 /product="ORF3" /protein_id="AAW79283.1" /translation="MPEHWEEAWLEATKGWHDLDCRCGNWQDHLWLLLADGDAALAAA VDAIERDAMAGDDATTATGRVTIGDDGCLEVNTNPPQESGIHALIHQPILCRSQEVLH TPNSPEKEECSRKQTVGVSLLPLPEPSVQIHPQRQRKVHFSEGTRKRKERKPRKPRHR PVSRVPKALLREMDRLMMKRQSDAEGGPGSDSDEWSESSLTDEWTTSDSDFIDTPIRE RCLNKKQKKR" CDS 428..646 /codon_start=1 /product="ORF2" /protein_id="AAW79282.1" /translation="MPEHWEEAWLEATKGWHDLDCRCGNWQDHLWLLLADGDAALAAA VDAIERDAMAGDDATTATGRVTIGDDGW" CDS 517..2430 /codon_start=1 /product="ORF1" /protein_id="AAW79281.1" /translation="MAPTRRWRRRFGRRRRRYRKRRYGWRRRYYRYRPRDYRRRWLVR RRRRSVYRRGGRRARPYRLFNPKVMRRVVIRGWWPILQCLKGQEALRYRPLQWDTERQ WRVRSDFEDQYGYLVQYGGGWGSGDVTLEGLYQEHLLWRNSWSKGNDGMDLVRYFGCV VYLYPLKDQDYWFWWDTDFKELYAENIKEYSQPSVMMMAKRTRIVIARERAPHRRKVR KIFIPPPSRDTTQWQFQTDFCNRKLFTWAAGLIDMQKPFDANGAFRNAWWLEQRNDQG EMKYIELWGRVPPQGDSELPKKKEFSTGTDNPNYNVQDNEEKNIYPIIIYVDQKDQKP RKKYCVCYNKTLNRWRLGQASTLKIGNLKGLVLRQLMNQEMTYIWKEGEYSAPFVQRW KGSRFAVIDARKADQENPKVSTWPIEGTWNTQDTVLKDVFGINLQNQQFRAADFGKLT LPKSPHDLDFGHHSRFGPFCVKNEPLEFQVYPPEPTNLWFQYRFFFQFGGEYQPPTGI RDPCVDTPAYPVPQSGSITHPKFAGKGGMLTETDRWGITAASSRALSADTPTEAAQSA LLRGDSEAKGEETEETASSSSITSAESSTEGDGSSDDEETIRRRRRTWKRLRRMVREQ LDRRMDHKRQRLH" BASE COUNT 872 a 658 c 783 g 545 t ORIGIN 1 tacactttgg ggttcaggag gctcaatttg gctcgcttcg ctcgcaccac gtttgctgcc 61 aggcggacct gattgaagac tgaaaaccgt taaattcaaa attgaaaagg gcgggcaaaa 121 tggcggacag ggggcggagt ttatgcaaat taatttatgc aaagtaggag gagctcgatt 181 ttaatttatg caaagtagga ggagtcaaat ctgattggtc gggagctcaa gtcctcattt 241 gcatagggtg taaccaatca gaattaaggc gttcccacga aagcgaatat aagtaggtga 301 ggttccgaat ggctgagttt atgccgccag cggtagacag aactgtctag cgactgggcg 361 ggtgccggag gatccctgat ccggagtcaa ggggcctatc gggcaggagc agctaggcgg 421 agggcctatg ccggaacact gggaggaagc ctggttggaa gctaccaagg gctggcacga 481 tctcgactgc cgctgcggta actggcagga ccacctatgg ctcctactcg ccgatggaga 541 cgccgctttg gccgccgccg tagacgctat agaaagagac gctatggctg gagacgacgc 601 tactaccgct acaggccgcg tgactatcgg cgacgatggc tggtaaggag aaggcggcgt 661 tccgtctacc gtagaggtgg acgtagagcg cgcccctacc gactgtttaa tccaaaagta 721 atgcggagag tagtaattag ggggtggtgg cctattttac aatgcttaaa aggacaggag 781 gcactaagat atagacctct acagtgggac acagagagac agtggagagt gagatcagac 841 ttcgaagacc agtacggata cctcgtacaa tacgggggag gttggggaag tggtgatgtg 901 acacttgaag gtctctacca agagcactta ttgtggagaa actcttggtc taaaggaaac 961 gatggaatgg acctagtaag atactttgga tgtgtagtat acctatatcc actaaaggac 1021 caggactatt ggttctggtg ggacacggac ttcaaagaat tatatgcaga aaacataaag 1081 gaatacagcc aaccatcagt aatgatgatg gcaaaaagaa caagaatagt aatagccaga 1141 gaaagggcac cacatagaag aaaagtaaga aaaatattta ttccgccacc ttcgagagac 1201 acaacacagt ggcagtttca gacagatttc tgcaatagaa agttatttac gtgggcagct 1261 ggtctaatag acatgcaaaa accgttcgat gctaatggag cctttagaaa tgcttggtgg 1321 ctggaacaga gaaatgatca gggagaaatg aaatacatag aactgtgggg aagagtaccc 1381 ccacaaggag attcagagct gcccaaaaaa aaagaattct ccacaggaac agataaccca 1441 aactacaatg ttcaggacaa tgaggagaaa aacatatacc ccattataat atacgtagac 1501 caaaaagatc aaaaaccaag aaaaaagtac tgcgtatgtt ataataagac cctcaacaga 1561 tggagactag gacaggcaag tactctaaag ataggaaacc tgaaaggact agtactaaga 1621 cagctgatga atcaagaaat gacgtatata tggaaagaag gagaatacag tgcccccttt 1681 gtacaaaggt ggaaaggcag cagattcgct gtgatagacg caagaaaggc agaccaagaa 1741 aacccgaaag tatcaacatg gccaattgag ggaacgtgga acacacagga cacagtactg 1801 aaggatgtat tcggtattaa cttgcaaaat caacaattta gggcggcgga ctttggtaaa 1861 ctcacactac caaaatcacc gcatgactta gacttcggtc accacagcag atttgggcca 1921 ttttgtgtga aaaatgaacc actggagttt caggtatacc ctccagaacc aactaacttg 1981 tggtttcagt acagattttt ctttcagttt ggaggtgaat accaaccccc cacaggaatc 2041 cgggatccat gcgttgatac accagcctat cctgtgccgc agtcaggaag tattacacac 2101 cccaaattcg ccggaaaagg aggaatgctc acggaaacag accgttgggg tatcactgct 2161 gcctcttcca gagccctcag tgcagataca cccacagagg cagcgcaaag tgcacttctc 2221 cgaggggact cggaagcgaa aggagaggaa accgaggaaa ccgcgtcatc gtccagtatc 2281 acgagtgccg aaagctctac tgagggagat ggatcgtctg atgatgaaga gacaatcaga 2341 cgcagaagga ggacctggaa gcgactcaga cgaatggtca gagagcagct tgaccgacga 2401 atggaccaca agcgacagcg acttcattga cacccccata agagaaagat gcctcaataa 2461 aaaacaaaag aaacgctaaa cagtgtccga ttactaatgg gggggggtcc ggggggggct 2521 tgcccccccg caagctgggt taccgcacta actccctgcc aagtgaaact cggggacgag 2581 tgagtgcggg acatcccgtg taatggctac ataactaccc ggctttgctt cgacagtggc 2641 cgtggctcga ccctcacaca acactgcagg tagggggcgc aattgggatc gttagaaaac 2701 tatggccgag catgggggnn nnnnnnnnnn nnccaacccc cccggtgggg gggccaaggc 2761 cccccctaca cccccccatg gggggctgcc gccccccaaa ccccccgcgt cggatggggg 2821 gggctgcgcc ccccccaaac cccccttgcc cggggctgtg ccccggaccc cc //