LOCUS       AY554932                 529 bp    DNA     linear   VRT 26-JUL-2016
DEFINITION  Xiphister atropurpureus isolate XA_NM3A a-tropomyosin gene, partial
            cds.
ACCESSION   AY554932
VERSION     AY554932.1
KEYWORDS    .
SOURCE      Xiphister atropurpureus (black prickleback)
  ORGANISM  Xiphister atropurpureus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Zoarcales;
            Stichaeidae; Xiphisterinae; Xiphister.
REFERENCE   1  (bases 1 to 529)
  AUTHORS   Hickerson,M.J. and Cunningham,C.W.
  TITLE     Contrasting quaternary histories in an ecologically divergent
            sister pair of low-dispersing intertidal fish (Xiphister) revealed
            by multilocus DNA analysis
  JOURNAL   Evolution 59 (2), 344-360 (2005)
   PUBMED   15807420
REFERENCE   2  (bases 1 to 529)
  AUTHORS   Hickerson,M.J. and Cunningham,C.W.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-FEB-2004) Biology, Duke University, Box 90338,
            Durham, NC 27708, USA
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Xiphister atropurpureus"
                     /mol_type="genomic DNA"
                     /isolate="XA_NM3A"
                     /db_xref="taxon:283024"
     mRNA            join(<1..71,433..>529)
                     /product="a-tropomyosin"
     CDS             join(<1..71,433..>529)
                     /codon_start=1
                     /product="a-tropomyosin"
                     /protein_id="AAU20949.1"
                     /translation="AQERLATALTKLEEAEKAADESERGMKVIENRAMKDEEKMELQE
                     IQLKEAKHIAEE"
     intron          72..432
BASE COUNT          129 a          125 c          146 g          129 t
ORIGIN      
        1 gctcaggagc gtctcgccac tgccctgacc aagctggagg aggctgagaa ggcagctgat
       61 gagagcgaga ggtgggtttc ttatgagcgg cgtagactca gacctctgat ctggctctct
      121 cgctgcagag accaggtggc ggggctgtgt ttctgtctct tcgtatgggg tacaagcgga
      181 gcctctgtgc tgcagagctg gatatcacac agctcactgt cacactagct gtgtcaaata
      241 gtgcagtcat ttcttaacat ccccaaattc agtattttat ccctttttca tgtcagaaaa
      301 cagttagcta ttcactctgg aaggacatat taaagattta ccagccgaca ctactgtgca
      361 ctagacctgt gtgggctgtc aggtctcagc tcctgattcc taacatcatg atctgtttct
      421 tccgtcacac agaggcatga aggtcattga gaacagggcc atgaaggacg aggagaagat
      481 ggagctgcag gagatccagc tgaaggaggc caagcacatt gctgaggag
//