LOCUS AY461116 7469 bp DNA linear INV 26-JUL-2016 DEFINITION Drosophila melanogaster strain CA027 epidermal growth factor receptor (Egfr) gene, partial cds. ACCESSION AY461116 VERSION AY461116.1 KEYWORDS . SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 7469) AUTHORS Palsson,A., Rouse,A., Riley-Berger,R., Dworkin,I. and Gibson,G. TITLE Nucleotide variation in the Egfr locus of Drosophila melanogaster JOURNAL Genetics 167 (3), 1199-1212 (2004) PUBMED 15280235 REFERENCE 2 (bases 1 to 7469) AUTHORS Palsson,A., Rouse,A., Riley-Berger,R., Dworkin,I. and Gibson,G. TITLE Direct Submission JOURNAL Submitted (05-NOV-2003) Genetics, North Carolina State University, Gardner Hall, Raleigh, NC 27695-7614, USA FEATURES Location/Qualifiers source 1..7469 /organism="Drosophila melanogaster" /mol_type="genomic DNA" /strain="CA027" /db_xref="taxon:7227" /chromosome="2" /geo_loc_name="USA: Winters, CA" /note="sibmated for 40 generations" gene <1..7469 /gene="Egfr" /locus_tag="CG10079" mRNA join(<2421..2643,2780..3954,4022..4154,4229..>6677) /gene="Egfr" /locus_tag="CG10079" /product="epidermal growth factor receptor" CDS join(<2421..2643,2780..3954,4022..4154,4229..6677) /gene="Egfr" /locus_tag="CG10079" /inference="non-experimental evidence, no additional details recorded" /note="receptor tyrosine kinase" /codon_start=3 /product="epidermal growth factor receptor" /protein_id="AAR85074.1" /translation="CIGTKSRLSVPSNKEHHYRNLRDRYTNCTYVDGNLELTWLPNEN LDLSFLDNIREVTGYILISHVDVKKVVFPKLQIIRGRTLFSLSVEEEKYALFVTYSKM YTLEIPDLRDVLNGQVGFHNNYNLCHMRTIQWSEIVSNGTDAYYNYDFTAPERXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXDVYANYTMGPRYIPLDPERLEVFSTVKEITGYLNIEGTHPQFRNLSYFRNLETIH GRQLMESMFAALAIVKSSLYSLEMRNLKQISSGSVVIQHNRDLCYVSNIRWPAIQKEP EQKVWVNENLRADLCEKNGTICSDQCNEDGCWGAGTDQCLTCKNFNFNGTCIADCGYI SXXXXXXXXXXXICHPECRTCNGAGADHCQECVHVRDGQHCVSECPKNKYNDRGVCRE CHATCDGCTGPKDTIGIGACTTCNLAIINNDATVKRCLLKDDKCPDGYFWEYVHPQEQ GSLKPLAGRAVCRKCHPLCELCTNYGYHEQVCSKCTHYKRREQCETECPADHYTDEEQ RECFQCHPECNGCTGPGADDCKSCRNFKLFDANETGPYVNSTMFNCTSKCPLEMRHVN YQYTAIGPYCAASPPRSSKITANLDVNMIFIITGAVLVPTICILCVVTYICRQKQKAK KETVKMTMALSGCEDSEPLRPSNIGANLCKLRIVKDAELRKGGVLGMGAFGRVYKGVW VPEGENVKIPVAIKELLKSTGAESSEEFLREAYIMASVEHVNLLKLLAVCMSSQMMLI TQLMPLGCLLDYVRNNRDKIGSKALLNWSTQIAKGMSYLEEKRLVHRDLAARNVLVQT PSLVKITDFGLAKLLSSDSNEYKAAGGKMPIKWLALECIRNRVFTSKSDVWAFGVTIW ELLTFGQRPHENIPAKDIPDLIEVGLKLEQXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXKLNRYCKDPSNKNSSTGDDETDSSAREVGVGNLRLDLPV DEDDYLMPTCQPGPNNNNNMNNPNQNNMAAVGVAAGYMDLIGVPVSVDNPEYLLNAQT LGVGESPIPTQTIGIPVMGVPGTMEVKVPMPGSEPTSSDHEYYNDTQRELQPLHRNRN TETRV" BASE COUNT 1456 a 1373 c 1408 g 1330 t ORIGIN 1 cggcatttaa cggacagcaa tagcaatgct cgataatttg atcgaatggg gtaaccattc 61 gagttcatac agatacacgg ctccaaatct caaacgctga gaaaacaaaa cctctcctaa 121 tgccctttta aatcttttgt tatattacaa caaaatctag acaattcttg ttcttcgtgt 181 tcttgcgttg ccccgggcga gggtacacaa aaatgttgcc agccatctgg ggtctgggtt 241 ttgcttttgt ttttggtttt ggtttcggtt tcgggccatg agttaaaaat cttttccacg 301 aaatgaaaac acnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 361 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 421 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 481 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 541 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 601 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 661 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 721 nnnnnnnnnt aatcagtacg tcagatgatg atcaccgtcg tgatgatggc cagaggggcg 781 gcgaagggcg aatggagtcg tgtgtgttga tggcttggca tacaaatcga taaacaaata 841 tagcaaatac agcgattttc cactgtctgc gttagcgcat ttgtatctgt gttggttgat 901 taatctgagc gctgaagttc gttgcctaag tcttttgttt taatgagcac atcatgaatt 961 atgactttga tttgtactgc gctgcgaccg ccagaccgcc gagtcggagt cgcagagtcg 1021 ccggcgactc attaatgttg ccacacttag ccttagccta aggattacaa atagcctttt 1081 tgtggctctg ctgccgaggc ggcggcgggc gtgtcgctgg ccgagaagaa aaatcacaaa 1141 tgcccagcca tgcgctcggt tcgcaagaaa cccgatgctg atgctgaagc gtttgcctgg 1201 cagggaatcc accgacgtcg cgtcgtggct taagtttcag gcctcgaaca tgaaaaacct 1261 ggctgataaa nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1321 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1381 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1441 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1501 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1561 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1621 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnntttcttc ccatcgccac aggaatttct 1681 ccgtttctgg cgacagaaat atttctgtct ttggttcgtt cctcttcata attatgggat 1741 atttgttcga aggaaatcga taaattaggg aaggaggagc ggccattttg tggataatta 1801 gttgggtgct ctctgctccg tgggctgggc cgtggcatcc acctccacaa tgtgtttggt 1861 tgtctaactc caactcaccg ctgacacatg gcacactttc gcggcccaca cggagtggtg 1921 gcgaccagcc cacgtagccc ttttcataag aatccccatc atctgtgcat atgaaattgt 1981 atctatcgga tgcaaatcaa tgaagttgtc gccgaagatg ctcgactacg cgagcggcta 2041 aaacaggtcg ctgactaatg ataagaggcc gtctgggagg aggagcgaga ctgcgtgggc 2101 tgctaattat taacaacgcc aactggcact gagagtctcg cgcccactgg tttcgtctct 2161 gagatttctg cctcatttta ttgcttccga gcaaacaaac aaccgggcaa agctatttcc 2221 gtttacgatc caaagctcga accgaaatta atttctcaaa ctgcccgagc ataagtcaac 2281 ttcaacacct acccaacctg gtgggctgtg catataattg gacagtttag ggtcaaccga 2341 aacaaaaccc attagcccgc atcgacaccc acagtattat attattacaa cgatttccct 2401 tttgtcaact ctctttgcag tctgcatcgg caccaaatct cggctctccg tgccctccaa 2461 caaggagcat cattaccgaa acctcagaga tcggtacacg aactgtacgt atgtggatgg 2521 caacctggag ctgacctggc tacccaacga gaatttggac ctcagcttcc tggacaacat 2581 acgggaggtc accggctata ttctgatcag tcatgtggac gttaagaaag tggtgtttcc 2641 caagtaagtg ctcaattaat taataagctt taaattcgaa caaaacaagt ttgaagaaaa 2701 ttgtataact tactaataag tcaagttaaa gctatattgt tattggacta gacctaatac 2761 cctgtactct ttcttacaga ctacaaatca ttcgcggacg cacgctgttc agcttatccg 2821 tggaggagga gaagtatgcc ttgttcgtca cttattccaa aatgtacacg ctggagattc 2881 ccgatctacg cgatgtctta aatggccaag tgggcttcca caacaactac aatctctgcc 2941 acatgcgaac gatccagtgg tcggagattg tatccaacgg cacggatgca tactacaact 3001 acgactttac tgctccggag cgcnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3061 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3121 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3181 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3241 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3301 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3361 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3421 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3481 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3541 nnnnnnnnnn nnnnnnnnnn nnnnnnnngg atgtctatgc caactacacg atgggaccac 3601 gatacatacc gctggatccc gagcgactgg aggtgttctc cacggtgaag gagatcaccg 3661 ggtatctgaa tatcgaggga acccacccgc agttccggaa tctgtcgtac ttccgcaatc 3721 tggaaacaat tcatggccgc cagctgatgg agagcatgtt tgccgctttg gcgatcgtta 3781 agtcatccct gtacagcctg gagatgcgca atctgaagca gattagttcc ggcagtgtgg 3841 tcatccagca taatagagac ctctgctacg taagcaatat ccgttggccg gccattcaga 3901 aggagcccga acagaaggtg tgggtcaacg agaatctcag ggcggatcta tgcggtaagt 3961 tcttaacaat cttgatatca gtgcaacata atatcataat gcatattttt gcaatttgca 4021 gagaaaaatg gaaccatttg ctcggatcag tgcaacgagg acggctgctg gggagctggc 4081 acggatcagt gccttacctg caagaacttc aatttcaatg gcacctgcat cgccgactgt 4141 ggttatatat ccaagtaagt ataaacagnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4201 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnga 4261 tatgccatcc agagtgccgg acttgcaatg gagctggagc agatcactgc caggagtgcg 4321 tccatgtgag ggacggtcag cactgtgtgt ccgagtgccc gaagaacaag tacaacgatc 4381 gtggtgtctg ccgagagtgc cacgccacct gcgatggatg cactgggccc aaggacacca 4441 tcggcattgg agcgtgtaca acgtgcaatt tggccattat caacaatgac gccacagtaa 4501 aacgctgcct gctgaaggac gacaagtgcc ccgatgggta cttctgggag tatgtgcatc 4561 cacaagagca gggatcgcta aagccattgg ccggcagagc agtttgccga aagtgccatc 4621 ccctttgcga gctgtgcacc aactacggat accatgaaca ggtgtgctcc aagtgcaccc 4681 actacaagcg acgagagcag tgcgagaccg agtgtccggc cgatcactac acggatgagg 4741 agcagcgcga gtgcttccag tgccacccag aatgcaacgg ttgcactggt ccgggtgccg 4801 acgattgcaa gtcttgtcgc aacttcaagt tgttcgacgc gaatgagacg ggtccctatg 4861 tgaactccac gatgttcaat tgcacctcga agtgtccctt ggagatgcga catgtgaact 4921 atcagtacac ggccattgga ccctactgtg cagctagtcc gccgaggagc agcaagataa 4981 ctgccaatct ggatgtgaac atgatcttca ttatcactgg tgctgttctg gtgccgacga 5041 tctgcatcct ctgcgtggtc acatacattt gtcggcaaaa gcaaaaggcc aagaaagaaa 5101 cagtgaagat gaccatggct ctgtccggct gtgaggattc cgagccgctg cgtccctcga 5161 acattggagc caatctatgc aagttgcgca ttgtcaagga cgccgagttg cgcaagggcg 5221 gagtcctcgg aatgggagcc tttggacgag tgtacaaggg cgtttgggtg ccggagggtg 5281 agaacgtcaa gattccagtg gccattaagg agctgctcaa gtccacaggc gccgagtcaa 5341 gcgaagagtt cctccgcgaa gcctacatca tggcctctgt ggagcacgtt aatctgctga 5401 agctcctggc cgtctgcatg tcctcacaaa tgatgctaat cacgcaactg atgccgcttg 5461 gctgcctgtt ggactatgtg cgaaataacc gagacaagat cggctctaag gctctgctca 5521 actggagcac gcaaatcgcc aagggcatgt cgtatctgga ggagaagcga ctggtccaca 5581 gagacttggc tgcccgcaat gtcctggtgc agactccctc gctggtgaag atcaccgact 5641 ttgggctggc caagttgctg agcagcgatt ccaatgagta caaggctgct ggcggcaaga 5701 tgcccatcaa gtggttggca ctggagtgca tccgcaatcg tgtattcacc agcaagtccg 5761 atgtctgggc ctttggtgtg accatttggg aactgctgac ctttggccag cgtccacacg 5821 agaacattcc cgctaaggat attcccgatc ttattgaagt cggtctgaag ctggagcagn 5881 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 5941 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 6001 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 6061 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 6121 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 6181 nnnnnnnnnn nnncaagctg aaccgctact gcaaggatcc tagtaacaag aattcgagta 6241 ccggagacga tgagacggat tcgagtgccc gggaagtggg cgtgggtaat ctgcgcctcg 6301 atctaccagt cgatgaggat gattatctga tgcccacttg ccaaccgggg cccaacaaca 6361 acaacaacat gaataatccc aatcaaaaca atatggcagc tgtgggcgtg gctgccggct 6421 acatggatct catcggtgtg cccgttagtg tggacaatcc ggagtatctg ctaaacgcgc 6481 agacacttgg agttggggag tcgccgatac ccacccaaac catcgggata ccggtgatgg 6541 gagtcccggg caccatggag gtcaaggtgc caatgccagg cagtgagcca accagctccg 6601 atcacgagta ctacaatgat acccaacggg agttgcagcc actgcatcga aaccgcaaca 6661 cggagacgag ggtgtaggct ccagtcgagt aggagcaatt gccaatgaag aaggagaatc 6721 ttgccaagtg cctttggaag ccatgcggat atgccttnnn nnnnnnnnnn nnnnnnnnnn 6781 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 6841 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 6901 nnnnnnnnnn gatcgtcgtc gcggtcctgc gcttgtagaa tccatgtaat tacgagaaca 6961 aaacaccgat agtgcatttc ttagacgcct ccgccatgcc aaactcgaag agatcccatc 7021 cggatcggct ccgccggagg gcgtacacta agctaagccg atgtccactt ctctcgggcg 7081 tcaattagtt cttgtacttg tagttagtag tagtcgtctc ttttagcgcc tagtttccaa 7141 ctgtgatata gtttgtagga ctcgacctaa ggacttctaa cacgatgaac aaatcgaacg 7201 actcgaaaca gttaagcaaa tgaaaatagt gacaaagtac cgatcttatg caattttagg 7261 ccaagtttca aatcccattc gatatatcaa gtttgacaat caaatcccga gcgtgccatg 7321 catcgatcga tgcaaatctc ctaaagattt cgaatacctt gttggcacaa tagagtgtaa 7381 gcgaatgcct agccgatatg ttactgatca aagatacata agtaatccac acaaacatat 7441 acttttaata tacaatacat gtacacgtg //