LOCUS AY217548 6188 bp DNA linear HUM 20-JAN-2003 DEFINITION Homo sapiens v-jun sarcoma virus 17 oncogene homolog (avian) (JUN) gene, complete cds. ACCESSION AY217548 VERSION AY217548.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 6188) AUTHORS Rieder,M.J., Livingston,R.J., Daniels,M.R., Montoya,M.A., Chung,M.-W., Miyamoto,K.E., Nguyen,C.P., Nguyen,D.A., Poel,C.L., Robertson,P.D., Schackwitz,W.S., Sherwood,J.K., Witrak,L.A. and Nickerson,D.A. TITLE Direct Submission JOURNAL Submitted (13-JAN-2003) Genome Sciences, University of Washington, 1705 NE Pacific, Seattle, WA 98195, USA COMMENT To cite this work please use: NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478, Department of Genome Sciences, Seattle, WA (URL: http://egp.gs.washington.edu). FEATURES Location/Qualifiers source 1..6188 /organism="Homo sapiens" /mol_type="genomic DNA" /db_xref="taxon:9606" variation 293 /frequency="0.01" /replace="c" repeat_region 435..569 /rpt_family="MIR" /rpt_type=dispersed variation 535 /frequency="0.26" /replace="c" variation 922 /frequency="0.08" /replace="t" variation 1180 /frequency="0.39" /replace="t" variation 1193 /frequency="0.04" /replace="c" variation 1214 /frequency="0.40" /replace="g" variation 1539 /frequency="0.05" /replace="c" variation 1616 /frequency="0.01" /replace="a" variation 1672 /frequency="0.01" /replace="a" variation 1696 /frequency="0.01" /replace="g" gene 1917..5172 /gene="JUN" mRNA 1917..5172 /gene="JUN" /product="v-jun sarcoma virus 17 oncogene homolog (avian)" variation 1945 /gene="JUN" /frequency="0.01" /replace="a" variation 2132..2135 /gene="JUN" /frequency="0.02" /replace="" variation 2187 /gene="JUN" /frequency="0.01" /replace="t" variation 2273..2274 /gene="JUN" /frequency="0.93" /replace="" variation 2287 /gene="JUN" /frequency="0.01" /replace="c" variation 2366 /gene="JUN" /frequency="0.01" /replace="c" variation 2603 /gene="JUN" /frequency="0.02" /replace="a" variation 2718 /gene="JUN" /frequency="0.02" /replace="t" variation 2821 /gene="JUN" /frequency="0.03" /replace="c" variation 2828 /gene="JUN" /frequency="0.01" /replace="a" variation 2860 /gene="JUN" /frequency="0.02" /replace="g" CDS 2892..3887 /gene="JUN" /codon_start=1 /product="v-jun sarcoma virus 17 oncogene homolog (avian)" /protein_id="AAO22993.1" /translation="MTAKMETTFYDDALNASFLPSESGPYGYSNPKILKQSMTLNLAD PVGSLKPHLRAKNSDLLTSPDVGLLKLASPELERLIIQSSNGHITTTPTPTQFLCPKN VTDEQEGFAEGFVRALAELHSQNTLPSVTSAAQPVNGAGMVAPAVASVAGGSGSGGFS ASLHSEPPVYANLSNFNPGALSSGGGAPSYGAAGLAFPAQPQQQQQPPHHLPQQMPVQ HPRLQALKEEPQTVPEMPGETPPLSPIDMESQERIKAERKRMRNRIAASKCRKRKLER IARLEEKVKTLKAQNSELASTANMLREQVAQLKQKVMNHVNSGCQLMLTQQLQTF" variation 3413 /gene="JUN" /frequency="0.05" /replace="t" variation 3641 /gene="JUN" /frequency="0.09" /replace="a" variation 4115 /gene="JUN" /frequency="0.01" /replace="t" variation 4416 /gene="JUN" /frequency="0.01" /replace="t" variation 4818 /gene="JUN" /frequency="0.01" /replace="t" variation 5008 /gene="JUN" /frequency="0.01" /replace="c" variation 5053 /gene="JUN" /frequency="0.04" /replace="g" variation 5221 /frequency="0.02" /replace="c" variation 5335 /frequency="0.01" /replace="g" variation 5519 /frequency="0.28" /replace="c" variation 5614 /frequency="0.01" /replace="g" variation 5647 /frequency="0.03" /replace="a" variation 5881 /frequency="0.01" /replace="g" variation 5948 /frequency="0.01" /replace="t" variation 6042..6046 /frequency="0.02" /replace="" BASE COUNT 1501 a 1636 c 1741 g 1310 t ORIGIN 1 cagtgaaagc taggtgagtg cccggagtga agaaaagttg gcaggtttcc cactgatacc 61 agctgctgtt ggtttctgaa cactcaaagc cgcaaatacc ttagggctgg gggcaatgaa 121 cccaaggctg aattccaagt tcagaagcag cgaagtctga atttagaacc taggaactta 181 aactgctgca ggtccaactt caagccccag ttttagacag aggcttggga aagatctgac 241 ttctaacccg gttccccctc ccctcctccc ctcgatgctt ctcacaggaa agtacacctg 301 gtcctgccaa atcgcactct tatatcctgg catcctatcc aggctctgcg aggatggaaa 361 ctgcgaggca ggggagggaa gcgggctgtt tggccaccac ctccctagtg ctgcaggcga 421 ccctgtcaca ctaactcctg gcagcccagt gaggtggacg gcaccggccc cacctgcaga 481 tgagggaaat gaagctcgga ggagttccgt gatttgcttg cttcacactg tggtagcctg 541 gccacgaaag aaccaggatt cccgacttcg ggattctttc caccacacac tttcgtccct 601 aaggggtggg gggcgggggg agaataaaat aaccgcggaa aaggaaccac ttacatgtgt 661 ctagcgcttc ctagaggcta cccaggatat gcgcccacca cccggccggg agtgcagaga 721 tttgaagtcc aggttctacc ccgggctccg agtactactg cgtgacttta tgcgagtgtc 781 cgccgccttc tgggcttgtt ttcccggaag caactcggcg cggatggagt gtgtgtgtgc 841 gcgcgcgcgc gcgttatgtt gtgcgtgttg tgttaagcgt gtgcgtgttg tccgggggcg 901 ggagggggag tagactaaca ccggggttcc ccgagtttcg gatcgcctac acgcttgttc 961 ccatctggac cctgttaccc accaattgcg cccactataa aaactgcccc tccgaggcaa 1021 agctgtgaac ccccgcgccc tttcccccac ggtcccggag gatgaagtgg ggtgcaacgg 1081 agactcagct gagcgtccag tttcgggcaa tacaaatctc tcggcttcta cgagcagcca 1141 gacgaccccg cggaccgtcg ctcctgaact tgaccgagac gcaaacttcg gagtgttctc 1201 aacgtggggg gcccactctc gggagaccgc ccctaaactt aagtcccctt aggctcgccc 1261 ccacctggga cttcacagag ccaccttaag ggcggtattc ccgccccccc ggaagtgcgg 1321 gggggtggca gcgtacttgg attctcagcc tccagccccg cgcggtggcg gccgccggtg 1381 gatgacttcg ggccccacaa gtggggaaac aacaaccacc cctcgcccgc acccctggcc 1441 caaaacaact ggccaggttc cctggcctcc cgggtccctg catcccccgc atccccgtcc 1501 gcagccgtga acttgagccc ccctccatca gaggttgcga gcgtccgccc gctcgcggca 1561 gccaccgtca ctagacagtc aaaccccaag acgtcagccc acaatgcacc gggcgggccg 1621 ggaaaaacgg cccggggagg ggaccgggga agagagggcc gagaggcgtg cggcaggggg 1681 gagggtagga gaaagaaggg cccgactgta ggagggcagc ggagcattac ctcatcccgt 1741 gagcctccgc gggcccagag aagaatcttc tagggtggag tctccatggt gacgggcggg 1801 cccgcccccc tgagagcgac gcgagccaat gggaaggcct tggggtgaca tcatgggcta 1861 tttttagggg ttgactggta gcagataagt gttgagctcg ggctggataa gggctcagag 1921 ttgcactgag tgtggctgaa gcagcgaggc gggagtggag gtgcgcggag tcaggcagac 1981 agacagacac agccagccag ccaggtcggc agtatagtcc gaactgcaaa tcttattttc 2041 ttttcacctt ctctctaact gcccagagct agcgcctgtg gctcccgggc tggtgtttcg 2101 ggagtgtcca gagagcctgg tctccagccg cccccgggag gagagccctg ctgcccaggc 2161 gctgttgaca gcggcggaaa gcagcggtac ccacgcgccc gccgggggaa gtcggcgagc 2221 ggctgcagca gcaaagaact ttcccggctg ggaggaccgg agacaagtgg cacagagtcc 2281 cggagcgaac ttttgcaagc ctttcctgcg tcttaggctt ctccacggcg gtaaagacca 2341 gaaggcggcg gagagccacg caagagaaga aggacgtgcg ctcagcttcg ctcgcaccgg 2401 ttgttgaact tgggcgagcg cgagccgcgg ctgccgggcg ccccctcccc ctagcagcgg 2461 aggaggggac aagtcgtcgg agtccgggcg gccaagaccc gccgccggcc ggccactgca 2521 gggtccgcac tgatccgctc cgcggggaga gccgctgctc tgggaagtga gttcgcctgc 2581 ggactccgag gaaccgctgc gcccgaagag cgctcagtga gtgaccgcga cttttcaaag 2641 ccgggtagcg cgcgcgagtc gacaagtaag agtgcgggag gcatcttaat taaccctgcg 2701 ctccctggag cgagctggtg aggagggcgc agcggggacg acagccagcg ggtgcgtgcg 2761 ctcttagaga aactttccct gtcaaaggct ccggggggcg cgggtgtccc ccgcttgcca 2821 gagccctgtt gcggccccga aacttgtgcg cgcagcccaa actaacctca cgtgaagtga 2881 cggactgttc tatgactgca aagatggaaa cgaccttcta tgacgatgcc ctcaacgcct 2941 cgttcctccc gtccgagagc ggaccttatg gctacagtaa ccccaagatc ctgaaacaga 3001 gcatgaccct gaacctggcc gacccagtgg ggagcctgaa gccgcacctc cgcgccaaga 3061 actcggacct cctcacctcg cccgacgtgg ggctgctcaa gctggcgtcg cccgagctgg 3121 agcgcctgat aatccagtcc agcaacgggc acatcaccac cacgccgacc cccacccagt 3181 tcctgtgccc caagaacgtg acagatgagc aggagggctt cgccgagggc ttcgtgcgcg 3241 ccctggccga actgcacagc cagaacacgc tgcccagcgt cacgtcggcg gcgcagccgg 3301 tcaacggggc aggcatggtg gctcccgcgg tagcctcggt ggcagggggc agcggcagcg 3361 gcggcttcag cgccagcctg cacagcgagc cgccggtcta cgcaaacctc agcaacttca 3421 acccaggcgc gctgagcagc ggcggcgggg cgccctccta cggcgcggcc ggcctggcct 3481 ttcccgcgca accccagcag cagcagcagc cgccgcacca cctgccccag cagatgcccg 3541 tgcagcaccc gcggctgcag gccctgaagg aggagcctca gacagtgccc gagatgcccg 3601 gcgagacacc gcccctgtcc cccatcgaca tggagtccca ggagcggatc aaggcggaga 3661 ggaagcgcat gaggaaccgc atcgctgcct ccaagtgccg aaaaaggaag ctggagagaa 3721 tcgcccggct ggaggaaaaa gtgaaaacct tgaaagctca gaactcggag ctggcgtcca 3781 cggccaacat gctcagggaa caggtggcac agcttaaaca gaaagtcatg aaccacgtta 3841 acagtgggtg ccaactcatg ctaacgcagc agttgcaaac attttgaaga gagaccgtcg 3901 ggggctgagg ggcaacgaag aaaaaaaata acacagagag acagacttga gaacttgaca 3961 agttgcgacg gagagaaaaa agaagtgtcc gagaactaaa gccaagggta tccaagttgg 4021 actgggttgc gtcctgacgg cgcccccagt gtgcacgagt gggaaggact tggcgcgccc 4081 tcccttggcg tggagccagg gagcggccgc ctgcgggctg ccccgctttg cggacgggct 4141 gtccccgcgc gaacggaacg ttggactttt cgttaacatt gaccaagaac tgcatggacc 4201 taacattcga tctcattcag tattaaaggg gggaggggga gggggttaca aactgcaata 4261 gagactgtag attgcttctg tagtactcct taagaacaca aagcgggggg agggttgggg 4321 aggggcggca ggagggaggt ttgtgagagc gaggctgagc ctacagatga actctttctg 4381 gcctgccttc gttaactgtg tatgtacata tatatatttt ttaatttgat gaaagctgat 4441 tactgtcaat aaacagcttc atgcctttgt aagttatttc ttgtttgttt gtttgggtat 4501 cctgcccagt gttgtttgta aataagagat ttggagcact ctgagtttac catttgtaat 4561 aaagtatata atttttttat gttttgtttc tgaaaattcc agaaaggata tttaagaaaa 4621 tacaataaac tattggaaag tactccccta acctcttttc tgcatcatct gtagatacta 4681 gctatctagg tggagttgaa agagttaaga atgtcgatta aaatcactct cagtgcttct 4741 tactattaag cagtaaaaac tgttctctat tagactttag aaataaatgt acctgatgta 4801 cctgatgcta tggtcaggtt atactcctcc tcccccagct atctatatgg aattgcttac 4861 caaaggatag tgcgatgttt caggaggctg gaggaagggg ggttgcagtg gagagggaca 4921 gcccactgag aagtcaaaca tttcaaagtt tggattgtat caagtggcat gtgctgtgac 4981 catttataat gttagtagaa attttacaat aggtgcttat tctcaaagca ggaattggtg 5041 gcagatttta caaaagatgt atccttccaa tttggaatct tctctttgac aattcctaga 5101 taaaaagatg gcctttgctt atgaatattt ataacagcat tcttgtcaca ataaatgtat 5161 tcaaatacca ataacagatc ttgaattgct tccctttact acttttttct tcccaagtta 5221 tatactgaag tttttatttt tagttgctga ggttaacatt gctgcaatct gaagtgattt 5281 gaaaattaag aagcaaagaa tttaggaaga gtcaaactag aagttgtgat ctgaatgaaa 5341 cagtctccca atttcattaa ttctttccct ctttctccat ctctatctct ctctctacta 5401 cctcaccccc aaataaaccc ctatgcctat ggaaactaac agtttagcat tttgggtctg 5461 tctgtagctt atttcttaat ttgtttctaa aataatcaac cttgtttaaa tatagaataa 5521 gtctcaaaag atagtaatct aatactatgg aaaagattca caagagaaaa catgaactag 5581 tactaactca atgattacat gcgtaaatca aacctcagct ctggggaaat gggaaacttg 5641 aattctgcct acagatataa cttaggagat caacaaggca gtgcttaaca agggaacaat 5701 tttttgcttg gttgcttttc ataccaagag ccagtgtgat tatcaggcag caaaagcaat 5761 ttgatatcca ggaatatttc acaaaccact aattgagtca gggctgtttg ctcattagca 5821 gtgttctagt acccagtagg tctgggagtg ctaatatcct gcctgtggct gtaaatccaa 5881 atacacaaag agtttctcct taggagtata tctaggagtg gaagagattg gacaggcttg 5941 ttagcttcgg atcctttgta ataacacttc ttgaacaaag ggttactggg agcagagccc 6001 agtttgccaa actgaatttg ccgatgtcag caacccggaa ggtgagatga ttttgaccat 6061 atgtagaaat agcagaggga caataaagca ttttggggtg gggctctgtg gaagctaaac 6121 aagagccaac tagaaaaaat aagcaggctg gggaattaat tacctgcaaa ggtagactaa 6181 gcccagac //