LOCUS AY207429 9803 bp DNA linear HUM 05-JAN-2003 DEFINITION Homo sapiens interleukin 11 (IL11) gene, complete cds. ACCESSION AY207429 VERSION AY207429.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 9803) AUTHORS Rieder,M.J., Carrington,D.P., da Ponte,S.H., Hastings,N.C., Ahearn,M.O., Kuldanek,S.A., Rajkumar,N., Toth,E.J., Yi,Q. and Nickerson,D.A. TITLE Direct Submission JOURNAL Submitted (26-DEC-2002) Genome Sciences, University of Washington, 1705 NE Pacific, Seattle, WA 98195, USA COMMENT To cite this work please use: SeattleSNPs. NHLBI HL66682 Program for Genomic Applications, UW-FHCRC, Seattle, WA (URL: http://pga.gs.washington.edu). FEATURES Location/Qualifiers source 1..9803 /organism="Homo sapiens" /mol_type="genomic DNA" /db_xref="taxon:9606" repeat_region 1..278 /rpt_family="Alu" /rpt_type=dispersed variation 125 /frequency="0.01" /replace="g" variation 187 /frequency="0.01" /replace="t" repeat_region 282..611 /rpt_family="Alu" /rpt_type=dispersed variation 357 /frequency="0.10" /replace="c" variation 447 /frequency="0.01" /replace="c" variation 509 /frequency="0.09" /replace="c" variation 970 /frequency="0.01" /replace="c" variation 970 /frequency="0.44" /replace="a" gene 1582..7566 /gene="IL11" mRNA join(1582..1651,3014..3186,3386..3472,3584..3745, 5778..7566) /gene="IL11" /product="interleukin 11" CDS join(1645..1651,3014..3186,3386..3472,3584..3745, 5778..5948) /gene="IL11" /codon_start=1 /product="interleukin 11" /protein_id="AAO13493.1" /translation="MNCVCRLVLVVLSLWPDTAVAPGPPPGPPRVSPDPRAELDSTVL LTRSLLADTRQLAAQLRDKFPADGDHNLDSLPTLAMSAGALGALQLPGVLTRLRADLL SYLRHVQWLRRAGGSSLKTLEPELGTLQARLDRLLRRLQLLMSRLALPQPPPDPPAPP LAPPSSAWGGIRAAHAILGGLHLTLDWAVRGLLLLKTRL" variation 1671 /gene="IL11" /frequency="0.01" /replace="a" misc_feature 2109..2947 /gene="IL11" /note="Region not scanned for variation" variation 3451 /gene="IL11" /frequency="0.30" /replace="a" variation 3638 /gene="IL11" /frequency="0.01" /replace="a" variation 3651 /gene="IL11" /frequency="0.01" /replace="a" variation 3835 /gene="IL11" /frequency="0.01" /replace="a" variation 4064 /gene="IL11" /frequency="0.04" /replace="g" repeat_region 4196..4511 /gene="IL11" /rpt_family="Alu" /rpt_type=dispersed variation 4267 /gene="IL11" /frequency="0.38" /replace="t" variation 4802 /gene="IL11" /frequency="0.18" /replace="g" repeat_region 5003..5113 /gene="IL11" /rpt_family="Alu" /rpt_type=dispersed variation 5108 /gene="IL11" /frequency="0.15" /replace="a" repeat_region 5116..5426 /gene="IL11" /rpt_family="Alu" /rpt_type=dispersed variation 5154 /gene="IL11" /frequency="0.01" /replace="t" variation 5157 /gene="IL11" /frequency="0.23" /replace="a" variation 5199 /gene="IL11" /frequency="0.03" /replace="c" variation 5288 /gene="IL11" /frequency="0.41" /replace="c" variation 5970 /gene="IL11" /frequency="0.01" /replace="t" variation 6068 /gene="IL11" /frequency="0.01" /replace="a" variation 6077 /gene="IL11" /frequency="0.02" /replace="t" variation 6092 /gene="IL11" /frequency="0.17" /replace="a" variation 6212 /gene="IL11" /frequency="0.15" /replace="g" variation 6448 /gene="IL11" /frequency="0.10" /replace="a" variation 6494 /gene="IL11" /frequency="0.10" /replace="c" variation 6576 /gene="IL11" /frequency="0.11" /replace="a" variation 6591 /gene="IL11" /frequency="0.05" /replace="t" repeat_region 6592..6897 /gene="IL11" /rpt_family="Alu" /rpt_type=dispersed variation 6656 /gene="IL11" /frequency="0.05" /replace="g" variation 6669 /gene="IL11" /frequency="0.18" /replace="g" repeat_region 6984..7169 /gene="IL11" /rpt_family="L1" /rpt_type=dispersed variation 7083 /gene="IL11" /frequency="0.17" /replace="a" variation 7161 /gene="IL11" /frequency="0.07" /replace="a" repeat_region 7170..7298 /gene="IL11" /rpt_family="Alu" /rpt_type=dispersed variation 7249 /gene="IL11" /frequency="0.33" /replace="c" repeat_region 7299..7523 /gene="IL11" /rpt_family="L1" /rpt_type=dispersed repeat_region 7700..7835 /rpt_family="MIR" /rpt_type=dispersed variation 7904 /frequency="0.05" /replace="c" repeat_region 8108..8316 /rpt_family="Alu" /rpt_type=dispersed variation 8111 /frequency="0.27" /replace="c" variation 8288 /frequency="0.07" /replace="a" variation 8337 /frequency="0.19" /replace="a" repeat_region 8449..8518 /rpt_family="Alu" /rpt_type=dispersed variation 8680 /frequency="0.12" /replace="a" variation 8703 /frequency="0.03" /replace="t" variation 8790 /frequency="0.01" /replace="t" variation 9153 /frequency="0.02" /replace="a" variation 9596 /frequency="0.03" /replace="t" variation 9670 /frequency="0.02" /replace="a" variation 9680 /frequency="0.31" /replace="g" BASE COUNT 2004 a 3117 c 2797 g 1885 t ORIGIN 1 acacctgtat tcccaccact ttgggaggct gaggcgggag gatgacctga gctcaggagt 61 ttgagaccag cctgggcaac atggcaaaac cctatctcta ctaaaaatac aaaaaatagc 121 caggcatggt ggcgggtgcc tgtaatccca gctactcagg aggctgaggc atgagaatca 181 cttgaacctg ggaggcggag gttacagtga gctgagatca caccactgca ccccagcctg 241 ggtgacacag cgagactctg tctcaaaaaa accaaaaacg aggccaggca cggtagctca 301 cacctgtcat cccagcactt tgggaggccg aggcaggcgg atcacgaagt caggagttcg 361 agaccagcct ggccaacatg gtaagacccc gtctctacta aaaatacaaa attagccggg 421 tgtggtggcg cacacctgta atcccagcta cttgggaggc tgaggcagga gaatcgcttg 481 aacccgggag gtggaggttg cagtgagctg agattgtgcc attgatcgcg ccattgcact 541 ccagcctggg tgacagagtg agactcagta ccaaaaaaca aacaaacaaa aaacaaacaa 601 aaaatgagaa aggcttttac tctctgcccc cattgctgag tccccaacat ctcagcgtct 661 ctgtctttct aatatctctg tctccccttt tctgtccctg gggcctctcc gtccctgtca 721 ctctgccccg tgtctctgtt tgcctggtgc ctttcttcag ctgcggcatc ctctgtctca 781 gagtcttggt gtctctgttc ctttcccctc ggggtctccc tgggtctccc caagtccctc 841 ctgctgtctt cctcccgctc tctgatctct gactcccaga acctctccct ctgtctccag 901 ggctgcccct ctgatcctct ttgcttctct ggtgtgtctc tctggctgcc tccatctctg 961 tggatctccg tctccctgtc tctgtctcag tctgtccttc actctgtgtg tgtgtgtgtg 1021 tgtctctctc tctctctctc cttcccttcc actccctctt cctcctgcct ccacctctcc 1081 aggcccctgt cttgtccctc cgtccggcct ttctctgcct ttccgtcctc ctgcctcccc 1141 atctctctct gctagtcctg gtccagccgg acccccaccc acagtcgggc cccagcgctt 1201 gagcctgagt gtctgctccg gcccgtggag gtggagggag gggacgccaa tgacctcacc 1261 agcccctctc cgaccacccc cccctttccc ttttcaactt ttccaacttt tccttccgtg 1321 ccctcctccg agcgcggcgg cgtgagccct gcaaggcagc cgctccgtct gaatggaaaa 1381 ggcaggcagg gagggtgagt caggatgtgt caggccgccc tcccctgccg cctgcccccc 1441 gcccgcccgc cccagccccc tatataaccc cccaggcgtc cacactccct cactgccgcg 1501 gccctgctgc tcagggcaca tgcctcccct ccccaggccg cggcccagct gaccctcggg 1561 gctcccccgg cagcggacag ggaagggtta aaggcccccg gctccctgcc ccctgccctg 1621 gggaacccct ggccctgtgg ggacatgaac tgtaagttgg ttcatgggga gggtggaggg 1681 gacagggagg cagggaggag agggacccac ggcgggggtg ggagcagacc ccgctgagtc 1741 gcacagagag ggacccggag acaggcagcc ggggaggaga gcagcttcgg agacaggagg 1801 cggcggagga gatgggcaga gagagacaca gacaggagcg gatggaggca gccaatcaga 1861 ggcgccgcag gagggacggg ccagacaggg ccccgagagg gagcgagacg cggagaccga 1921 gcaggggcag ggacgcaggg actggtgccg ggagggaggt gacccccatc gacccaggcc 1981 ccagggagcc cgcggggacc gggagactcc ctgggattcc ggcagagagg ctccggaggg 2041 aaactgaggc agggtccgcg gagagcggag caagccaggg agtagcgacc ccagccgggg 2101 ggaggagaga gactgggcgc ggggggaaag cggggagagc cgggcagatg cggccgacgg 2161 aggcgcggac agaccgacgg ctggcgggcc cggggggcgg gctgggggtg tgcgaggcgc 2221 gggcggccgg ggagcgctga ttggctggcg ggtggccggg tgggcggggc ggccggggtg 2281 ggctgcgggg agcgagctcc ggacccccgc gccccccgcg ccccccgcgc cccccgccgc 2341 cagctctccc gctcccgcgg cccggccggg cccatggctc tgcccctctc cgcccaggtg 2401 cgctgcggcc cgggcttctg ccgcccaccc ggcggggctc ctgggagggc gtctaagggg 2461 tctcccgtgg gagaggtccg tgtctcccgg gctccgtcct ggcttctggc tccttcccct 2521 gctcccagcc agctcgggct cccgcggccc ggggaggggg caggttctgg cctgtgcctc 2581 ccccaccatg ccccgccccg gggcccagat tccggcgtcc gggggcggac gggagacgcc 2641 cggcccgtct acccgccccg ggccgcgtct gctccgacgg gcggggcagc cagagccagg 2701 gagggagagg gaagcccgcc tggccctgcg acctgcccgc gggcgttcca ccctgggact 2761 taagacctcc agctccatcc tccctaaggc cgggagtcca ggccccagac cctcctcccc 2821 gagacccagg agtccagacc ccaggccttc ctccctcaga cctaggagtc caggccccca 2881 gcctctcctc cctcagaccc aggaggagtc cagaccccag ttcctcctcc ctcagacccg 2941 ggagtccagg cccaggccct cctctctcag acccggagtc cagcctgagc tctctgcctt 3001 atcctgcccc caggtgtttg ccgcctggtc ctggtcgtgc tgagcctgtg gccagataca 3061 gctgtcgccc ctgggccacc acctggcccc cctcgagttt ccccagaccc tcgggccgag 3121 ctggacagca ccgtgctcct gacccgctct ctcctggcgg acacgcggca gctggctgca 3181 cagctggtag gagagactgg gctggggcca gcacaggagt gagaggcaga gaggaacgga 3241 gaggagtctg cgggcagcca cttggagggg ttctgggctc tcaggtggca gagtgaggga 3301 ggggaagagt tgggggcctg gcgtggggga tggagggagc cccgaggctg ggcaggggcc 3361 acctcacagc ttttttccct gccagaggga caaattccca gctgacgggg accacaacct 3421 ggattccctg cccaccctgg ccatgagtgc gggggcactg ggagctctac aggtaagggc 3481 aagggagtgg gctggggaca aggtgggagg caggcagtga agggggcggg gaggatgagg 3541 ggcactggtc gggtgttctc tgatgtcccg gctctatccc cagctcccag gtgtgctgac 3601 aaggctgcga gcggacctac tgtcctacct gcggcacgtg cagtggctgc gccgggcagg 3661 tggctcttcc ctgaagaccc tggagcccga gctgggcacc ctgcaggccc gactggaccg 3721 gctgctgcgc cggctgcagc tcctggtatg tcctggcccc aagacctgac accccagacc 3781 cccacccctg gccccaaaat cctgtggcct gagtccttga agcctgagac cccagacccg 3841 agtgcaacag ccccgctctg agaccctgac accctaacag cccgctctga gaccctgaca 3901 ccgtaacagc cccgctctga gaccctgacc ctaacagtcc tgctctgaga ccctgaccct 3961 gcagtcccaa gatcctgtgg ccctgagacc ctgaggccct agacccccaa atcctgccca 4021 gaaacttcaa attctcaccc aagaccctga gactccatca tccatgacct caaagtcccc 4081 agatcccagc ccctaagacc caagacccca tcctgaagcc caaagccttg agaattcaaa 4141 tcctcacctc aagacttgga gaccctggcc ccatgacatt gaaaaccatg gacctggcca 4201 ggcgtggtgg ctcacgcctg taatcccagc actttgggag gccgaggcaa gtggatcacc 4261 tgaggtcggg agttcaagac cagccagacc aacatggtga aaccctgtct ctactaaaaa 4321 tacaaaatta gccaggcgtg gtggtgcatg cctgtaatcc cagctacttg ggaggctgag 4381 gcaggagaat cgcttgaacc tgggaggcgg aggttgcagt gagccgagat cgcaccatta 4441 cactccagcc tgggcaacaa gagcaaaact ccctctctct caaaaaaaaa aaaaaaaaaa 4501 aaaagaagga aaagaaaacc atggacctcc agaccctgag accccaggcc ccagccctga 4561 gatcctgaca tcttaaagat cccaggccct aagatacaag accttgaccc aaagccagcc 4621 ttgggaccct ggctgtacaa acccaagacc tccaggacct agaccccgag ccctgaggcc 4681 ctatgtctca ctcccaacat cgaaaaccct gacacctcag atcctgagcc tgcgcctgta 4741 cgactccaag accctcactt ccaaagccag gcccaaagcc ctgagaccag aagacttcaa 4801 accctggttc ttgggcctaa ctccaaagac cctggatctc aaattccaac ttctagctct 4861 gagactccag ccctcaccca tgagttcctg aacttgaacc cagagacccc atctctaaga 4921 cttcagcctt gagatccagg gcctgaccct agactcgagc ccacagacct cagatactgt 4981 ctgtaaaacc ccagctctgg tggggagcag tggctcactc ctgtaatccc aaggcagggg 5041 aggccaaggc agaaggacct cttgaggcca tgagtttgag acagcctggg cagcatagca 5101 agactctgtt tcttaattat tattattatt attatttttt ggagacagag tctcgcgctc 5161 tgttgcccag gctagagtgc aatggtgcca tttcggcttg ctggaacctc cgcctcctgg 5221 gctcaagcga ttctcctgcc tcagcctcct gagtagctgg gacttcaggt gcacactgcc 5281 acacccggat aatttttttg tattttagta gacacagggt ttcaccgtgt tgcccaggct 5341 ggtcacaaac tcctgagctc aggccatccg cccgcctcgg cctcccaaag cgctgggata 5401 acaggcgtga tcccgcgcgc ctggcttctt aattgttcta acagcagcca caacaacaaa 5461 aacccagctc tgagattcca gccccggcga ctctaacagt cccaggcccg atccctcacc 5521 tagaaccgag atgccagccc tgactccaca gacttcaccc ccaaccccca cactcagctc 5581 tggaagcccg tcctgactcc agcctccatt ttcggaaccc cacagcctga agagctcccg 5641 gcctaaacac ttcaccccac gcgccacagt ccccctgtga atatgcagcc ccgattcagc 5701 tgcagctcca cagcacccct gccctgcacc cccgctgcac cccctacctg tgactcacct 5761 ctctcctctc cccacagatg tcccgcctgg ccctgcccca gccacccccg gacccgccgg 5821 cgcccccgct ggcgcccccc tcctcagcct gggggggcat cagggccgcc cacgccatcc 5881 tgggggggct gcacctgaca cttgactggg ccgtgagggg actgctgctg ctgaagactc 5941 ggctgtgacc cggggcccaa agccaccacc gtccttccaa agccagatct tatttattta 6001 tttatttcag tactgggggc gaaacagcca ggtgatcccc ccgccattat ctccccctag 6061 ttagagacag tccttccgtg aggcctgggg ggcatctgtg ccttatttat acttatttat 6121 ttcaggagca ggggtgggag gcaggtggac tcctgggtcc ccgaggagga ggggactggg 6181 gtcccggatt cttgggtctc caagaagtct gtccacagac ttctgccctg gctcttcccc 6241 atctaggcct gggcaggaac atatattatt tatttaagca attacttttc atgttggggt 6301 ggggacggag gggaaaggga agcctgggtt tttgtacaaa aatgtgagaa acctttgtga 6361 gacagagaac agggaattaa atgtgtcata catatccact tgagggcgat ttgtctgaga 6421 gctggggctg gatgcttggg taactggggc agggcaggtg gaggggagac ctccattcag 6481 gtggaggtcc cgagtgggcg gggcagcgac tgggagatgg gtcggtcacc cagacagctc 6541 tgtggaggca gggtctgagc cttgcctggg gccccgcact gcatagggcc gtttgtttgt 6601 tttttgagat ggagtctcgc tctgttgcct aggctggagt gcagtgaggc aatctaaggt 6661 cactgcaacc tccacctccc gggttcaagc aattctcctg cctcagcctc ccgattagct 6721 gggatcacag gtgtgcacca ccatgcccag ctaattattt atttcttttg tatttttagt 6781 agagacaggg tttcaccatg ttggccaggc tggtttcgaa ctcctgacct caggtgatcc 6841 tcctgcctcg gcctcccaaa gtgctgggat tacaggtgtg agccaccaca cctgacccat 6901 aggtcttcaa taaatattta atggaaggtt ccacaagtca ccctgtgatc aacagtaccc 6961 gtatgggaca aagctgcaag gtcaagatgg ttcattatgg ctgtgttcac catagcaaac 7021 tggaaacaat ctagatatcc aacagtgagg gttaagcaac atggtgcatc tgtggataga 7081 acgccaccca gccgcccgga gcagggactg tcattcaggg aggctaagga gagaggcttg 7141 cttgggatat agaaagatat cctgacattg gccaggcatg gtggctcacg cctgtaatcc 7201 tggcactttg ggaggacgaa gcgagtggat cactgaagtc caagagtttg agaccggcct 7261 gcgagacatg gcaaaaccct gtctcaaaaa agaaagaatg atgtcctgac atgaaacagc 7321 aggctacaaa accactgcat gctgtgatcc caattttgtg tttttctttc tatatatgga 7381 ttaaaacaaa aatcctaaag ggaaatacgc caaaatgttg acaatgactg tctccaggtc 7441 aaaggagaga ggtgggattg tgggtgactt ttaatgtgta tgattgtctg tattttacag 7501 aatttctgcc atgactgtgt attttgcatg acacatttta aaaataataa acactatttt 7561 tagaataaca gaatatcagc ctcctcctct ccaaaaataa gccctcagga ggggacaaag 7621 ttgaccgctg attgagcctg tcagggctgt gcactaagtg tgggcttttt acttacacaa 7681 tcctcctgga ctcttgaata cgccctgttt tacaggcgag ggaaactgag tctcagacaa 7741 ggagtgggga ctctgttgca caaagtcaca cagctaggga gaggtggaag tgggattctg 7801 cgccgtgtct ggctctttcc caaagctctc tttgcaagtc ggtgttgagg aatcctcgcc 7861 acatgcacac acatgagata tggagaaaca ggttcagtaa ggatttgggt cttacccagg 7921 gcctagagaa gggtcaatgg cagagtaggg atgataattc aaatgcttta gttacttttc 7981 cctttacaat aacccagaca gacttccagg ggccccgtgt cgtcactagt ttgagtctgg 8041 ggttggaggt gcccatcctg ggcccggagt tttgattcac ccatcatagc cctcaagact 8101 ccaggctggc tgggcgcggt ggctcacgcc tgtaatccca gcactttggg aggctgaggc 8161 gggtggatca cttgaggtca ggagttcaag gccagcctga ccaacatgga gaaaccctgt 8221 ctctactaaa aatacaatcc agctactcgg aaggctgagg caggagaatc gctcgaaccc 8281 aggagacggg ggttgcggtg agccgagatc acatcacaaa cagccctagg cagtgcgggg 8341 ccccaggcga ggctcagacc tgcctccaca gagctgtctg ggtgatcgtg cctcctccgt 8401 ggaggcaggg tttgagcctc ccctgggggc cccgcactgc taaggctgtt tgtttttgcg 8461 atggagtctc gctctgttgc ctaggctgga gtgcagtgtg gcaatctaag ctcactgcct 8521 gggcaacaag agtgaaattc catctcaaaa aacaaaaaac aaacaaacaa acaaaaaact 8581 ccaggctgta tccctggagg agaagggagc ccacagtccc cggagagttc ctggaagagg 8641 cccctgtgtg tccgatgagg tcacaaagcc cctccaccag aggctcctcc cccagacccc 8701 tgctgtccac cctggcaggg ccatggcgga ggcccgagtc tcccagcctg gggcatctcc 8761 acgctctgta acgctgagct ccaggcaccc gtgaagcccc acgggtcaag gctggtgggc 8821 cggggctggg aggcctgcac gcctgggttc tgggtcccta aaccagtacc catccaccac 8881 agccaccatg atctggcttc gaaacaggag gtgccttgag ccgctccagg gcaccccgaa 8941 gtgggtccct gttctggggg agctgcaaaa gaccctccag aagggcgagt acctgcccct 9001 ccgtccgctg cccatgttcg agagtaactt tgttcaggtc tccagttccc agtgccccgg 9061 ggctgagagg gacagagggg aagcaaggcc ccccgtgctg ggggatcttg agagggaacg 9121 ggatttagca gtcactgtgt gggggacgat caggagggag gctcaggctg tggctgctgg 9181 aggaaggagt ggtcccagcc ccctctccct ggctgcccca ggtgacccat caagggggcc 9241 cagtgttcgt gaatcacaga accaaccggc tggccatggg cgtggccgcc tccctgccag 9301 gcctggtgtt gcctgacatc ttgctgatcg gccagcccgc cgaggacagg gactgctccg 9361 gcctcgtgct gaccaggtgc cgcatccccc aacccctcgg ccgccccctc cacccctcct 9421 gctctagacg ctcccctctc cctctcccag gatgatcccc ctggacctcg tccacctctg 9481 cgtccatgac ctctctgcct ggcgcctgaa gctgcgcctg gtctcgggcc gccagtacta 9541 cctggccctg gacgcccctg acaacgaggt gggcttcctg ttccactgct gggtccgcct 9601 catcaacctg cttcaggagc cggctcccac ctggaccccc aggaccacgc gcacggcccc 9661 cctggatatg ccgctggcca aagcgcctgc ctccacctgg cacctgcagg tgggatccca 9721 gctccacaga ccagggcatg gcaggcccca ggaaccctcc ggccagatcc agaggggact 9781 cgaccaagag cccaaagtct agg //