LOCUS AY136353 2014 bp mRNA linear PLN 27-AUG-2002 DEFINITION Arabidopsis thaliana neoxanthin cleavage enzyme-like protein (At4g19170) mRNA, complete cds. ACCESSION AY136353 VERSION AY136353.1 KEYWORDS FLI_CDNA. SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 2014) AUTHORS Southwick,A., Nguyen,M., Tripp,M., Palm,C.J., Jones,T., Wu,T., Carninci,P., Chen,H., Cheuk,R., Chan,M.M., Chang,C.H., Dale,J.M., Deng,J.M., Hayashizaki,Y., Hsuan,V.W., Lee,J.M., Ishida,J., Kamiya,A., Kawai,J., Kim,C.J., Narusaka,M., Quach,H.L., Sakurai,T., Satou,M., Seki,M., Shinn,P., Tang,C.C., Toroumi,M., Wallender,E.K., Wong,C., Wu,H.C., Yamada,K., Yu,G., Yuan,S., Shinozaki,K., Ecker,J., Theologis,A. and Davis,R.W. TITLE Direct Submission JOURNAL Submitted (25-JUL-2002) DNA Sequencing and Technology Center, Stanford University, 855 California Avenue, Palo Alto, CA 94304, USA COMMENT e-mail for correspondence: arab@sequence.stanford.edu RIKEN Genomic Sciences Center (GSC) members carried out the collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN Arabidopsis Full-Length cDNA'): Seki,M., Narusaka,M., Ishida,J., Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J., Hayashizaki,Y. and Sh inozaki,K. The Salk, Stanford, PGEC (SSP) Consortium members carried out the sequencing and annotation of the RAFL cDNAs: Southwick,A., Nguyen,M., Tripp,M., Palm,C.J., Jones,T., Wu,T., Chen,H., Cheuk,R., Chan,M.M., Chang,C.H., Dale,J.M., Deng,J.M., Hsuan,V.W., Lee,J.M., Kim,C.J., Quach,H.L., Shinn,P., Tang,C.C., Toroumi,M., Wallender,E.K., Wong,C., Wu,H.C., Yamada,K., Yu,G., Yuan,S., Ecker,J., Theologis,A. and Davis,R.W. Southwick,A. (SSP/Stanford) and Seki,M. (RIKEN GSC) contributed equally to this work. Shinozaki,K. (RIKEN GSC) and Davis,R.W. (SSP/Stanford) contributed equally to this work as PIs. FEATURES Location/Qualifiers source 1..2014 /organism="Arabidopsis thaliana" /mol_type="mRNA" /db_xref="taxon:3702" /chromosome="4" /clone="RAFL09-29-B22 (R24040)" /ecotype="Columbia" /note="This clone is in pBluescript" gene 1..2014 /gene="At4g19170" /gene_synonym="T18B16.140" CDS 48..1835 /gene="At4g19170" /gene_synonym="T18B16.140" /codon_start=1 /product="neoxanthin cleavage enzyme-like protein" /protein_id="AAM97019.1" /translation="MDSVSSSSFLSSTFSLHHSLLRRRSSSPTLLRINSAVVEERSPI TNPSDNNDRRNKPKTLHNRTNHTLVSSPPKLRPEMTLATALFTTVEDVINTFIDPPSR PSVDPKHVLSDNFAPVLDELPPTDCEIIHGTLPLSLNGAYIRNGPNPQFLPRGPYHLF DGDGMLHAIKIHNGKATLCSRYVKTYKYNVEKQTGAPVMPNVFSGFNGVTASVARGAL TAARVLTGQYNPVNGIGLANTSLAFFSNRLFALGESDLPYAVRLTESGDIETIGRYDF DGKLAMSMTAHPKTDPITGETFAFRYGPVPPFLTYFRFDSAGKKQRDVPIFSMTSPSF LHDFAITKRHAIFAEIQLGMRMNMLDLVLEGGSPVGTDNGKTPRLGVIPKYAGDESEM KWFEVPGFNIIHAINAWDEDDGNSVVLIAPNIMSIEHTLERMDLVHALVEKVKIDLVT GIVRRHPISARNLDFAVINPAFLGRCSRYVYAAIGDPMPKISGVVKLDVSKGDRDDCT VARRMYGSGCYGGEPFFVARDPGNPEAEEDDGYVVTYVHDEVTGESKFLVMDAKSPEL EIVAAVRLPRRVPYGFHGLFVKESDLNKL" BASE COUNT 532 a 479 c 454 g 549 t ORIGIN 1 acagccttaa acgtggagcc aaagaaagta aaaacaaaag gagagcaatg gactctgttt 61 cttcttcttc cttcctctcc tccacattct ctcttcatca ctctcttctt cgccgccgat 121 cttcctctcc tactctcctc cgtatcaact ccgccgtcgt cgaagaacgt tctccaatca 181 caaacccaag cgacaacaat gatcgtcgta acaaacccaa aacactccac aaccgaacca 241 atcacacctt agtctcatca ccaccgaaac tccgaccaga aatgactctc gcaacagctc 301 tcttcaccac cgtcgaagat gtaatcaaca cgttcatcga tccaccttca cgtccttccg 361 ttgatccaaa acatgtcctc tctgataact tcgctcctgt cctcgacgag cttcctccaa 421 cagactgtga aatcatccac ggcactcttc cactgtcact taacggcgct tacatccgta 481 acggtccaaa tccacagttt ctccctcgtg gtccttacca tctcttcgac ggcgacggta 541 tgcttcacgc cataaaaatc cacaacggta aagccactct ctgtagcaga tacgtcaaga 601 cttataaata caacgtcgaa aaacaaaccg gagctccggt tatgcctaac gtgttttccg 661 gattcaacgg tgtaacggcg tcagtagctc gtggagcttt aacggcagct agggttttaa 721 ccggacagta taatccggtt aacggcatag gtttagctaa tacaagtcta gctttcttca 781 gtaaccgtct ctttgcttta ggtgaatctg atttacccta cgccgtccga ttaaccgaat 841 caggagatat tgaaacgatc ggacggtacg atttcgacgg gaaattagcg atgagtatga 901 cagctcatcc taaaaccgat ccaataaccg gagaaacttt cgctttccgg tacggtccgg 961 ttccaccgtt tttaacatat ttccggtttg attccgccgg gaaaaaacaa agagacgttc 1021 cgatattctc gatgacgtct ccgtcgtttc tccatgactt cgcgatcacg aaacgtcacg 1081 cgattttcgc agagattcag cttggcatga ggatgaacat gttggatttg gttctcgaag 1141 gtggttctcc ggttggtact gataacggaa aaactccaag gcttggagtg attcctaagt 1201 acgccggaga tgagtcggag atgaaatggt tcgaagttcc tggattcaat atcattcacg 1261 ctattaatgc ttgggatgaa gatgatggaa acagcgtcgt tttgattgca ccgaatatta 1321 tgtcgattga acatacttta gagaggatgg atctggttca tgctttggtg gagaaggtga 1381 agatcgatct cgtcaccggg attgtgagac gtcatccgat ctcagcgagg aatctcgatt 1441 tcgctgtgat taatccggcg tttctcggga gatgtagcag gtacgtttac gcggcgattg 1501 gagatccgat gccgaagatc tccggtgtgg tgaagcttga tgtgtctaaa ggagatcggg 1561 atgattgtac ggtggcccgt agaatgtacg gttcaggttg ttacggcgga gaaccgtttt 1621 tcgtagctag ggatcctggt aatccggagg cggaggagga tgatggttat gtggtgacgt 1681 atgttcacga tgaagtgact ggagaatcga agtttctggt gatggacgct aaatcgccgg 1741 agcttgaaat cgtcgccgcc gtgaggttgc cgcgaagggt tccgtacgga ttccatgggt 1801 tatttgtcaa ggaaagtgac cttaataagc tttaacaata taggtaactg caatagttaa 1861 tagaataatt aagtcttaat tacgtcccgt acaacaaatc gcatagtgtt gttgcacact 1921 tgcactttat acattaaact aaagtacaca tagtttggtg gtggtcgatg tatataaaac 1981 ataccaaagc ttatgaatat tatttttttc tttt //