LOCUS AY128456 4455 bp mRNA linear INV 08-JUL-2002 DEFINITION Drosophila melanogaster RE01586 full insert cDNA. ACCESSION AY128456 VERSION AY128456.1 KEYWORDS FLI_CDNA. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 4455) AUTHORS Stapleton,M., Brokstein,P., Hong,L., Agbayani,A., Carlson,J., Champe,M., Chavez,C., Dorsett,V., Dresnek,D., Farfan,D., Frise,E., George,R., Gonzalez,M., Guarin,H., Kronmiller,B., Li,P., Liao,G., Miranda,A., Mungall,C.J., Nunoo,J., Pacleb,J., Paragas,V., Park,S., Patel,S., Phouanenavong,S., Wan,K., Yu,C., Lewis,S.E., Rubin,G.M. and Celniker,S. TITLE Direct Submission JOURNAL Submitted (03-JUL-2002) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, Berkeley, CA 94720, USA COMMENT Sequence submitted by: Berkeley Drosophila Genome Project Lawrence Berkeley National Laboratory Berkeley, CA 94720 This clone was sequenced as part of a high-throughput process to sequence clones from Drosophila Gene Collection 1 (Rubin et al., Science 2000). The sequence has been subjected to integrity checks for sequence accuracy, presence of a polyA tail and contiguity within 100 kb in the genome. Thus we believe the sequence to reflect accurately this particular cDNA clone. However, there are artifacts associated with the generation of cDNA clones that may have not been detected in our initial analyses such as internal priming, priming from contaminating genomic DNA, retained introns due to reverse transcription of unspliced precursor RNAs, and reverse transcriptase errors that result in single base changes. For further information about this sequence, including its location and relationship to other sequences, please visit our Web site (http://fruitfly.berkeley.edu) or send email to cdna@fruitfly.berkeley.edu. FEATURES Location/Qualifiers source 1..4455 /organism="Drosophila melanogaster" /mol_type="mRNA" /strain="y; cn bw sp" /db_xref="taxon:7227" gene 1..4455 /gene="rst" /db_xref="FLYBASE:FBgn0003285" CDS 539..2833 /gene="rst" /note="Longest ORF" /codon_start=1 /product="RE01586p" /protein_id="AAM75049.1" /db_xref="FLYBASE:FBgn0003285" /translation="MLHTMQLLLLATIVGMVRSSPYTSYQNQRFAMEPQDQTAVVGAR VTLPCRVINKQGTLQWTKDDFGLGTSRDLSGFERYAMVGSDEEGDYSLDIYPVMLDDD ARYQCQVSPGPEGQPAIRSTFAGLTVLVPPEAPKITQGDVIYATEDRKVEIECVSVGG KPAAEITWIDGLGNVLTDNIEYTVIPLPDQRRFTAKSVLRLTPKKEHHNTNFSCQAQN TADRTYRSAKIRVEVKYAPKVKVNVMGSLPGGAGGSVGGAGGGSVHMSTGSRIVEHSQ VRLECRADANPSDVRYRWFINDEPIIGGQKTEMVIRNVTRKFNDAIVKCEVQNSVGKS EDSETLDISYAPSFRQRPQSMEADVGSVVSLTCEVDSNPQPEIVWIQHPSDRVVGTST NLTFSVSNETAGRYYCKANVPGYAEISADAYVYLKGSPAIGSQRTQYGLVGDTARIEC FASSVPRARHVSWTFNGQEISSESGHDYSILVDAVPGGVKSTLIIRDSQAYHYGKYNC TVVNDYGNDVAEIQLQAKKSVSLLMTIVGGISVVAFLLVLTILVVVYIKCKKRTKLPP ADVISEHQITKNGGVSCKLEPGDRTSNYSDLKVDISGGYVPYGDYSTHYSPPPQYLTT CSTKSNGSSTIMQNNHQNQLQLQQQQQQSHHQHHTQTTTLPMTFLTNSSGGSLTGSII GSREIRQDNGLPSLQSTTASVVSSSPNGSCSNQSTTAATTTTTHVVVPSSMALSVDPR YSAIYGNPYLRSSNSSLLPPPTAV" BASE COUNT 1277 a 1038 c 1071 g 1069 t ORIGIN 1 acttcgttcc gttcgctcgt accgttcgct tcgtagcggc ggaaactccg tactttcgat 61 agctggtatc tcacagatac ttttcgagac cccgaagacg agaactcgca tcgcatattc 121 gcccgagaaa actctcagta aatctcagat aattaaaacg aaatatataa ctaaacgtca 181 attttttttt tggtgcaaac gcaagccaaa aaatttcatt ttggtgtgga ttaccagtgg 241 aaaagtgtgt gcttaaaatg gaataaacaa ggctatcata aaaacaaagc ccgaaaaacc 301 aaacaagctg aaaattgtca acccaacaat tatggattag tgccagtggc cggtcagagt 361 cagttaaaaa tatatatgca tataagagga ctaaggagcc gaaattgttt aaattgatta 421 caaacaaaca gtatctcaag gcccaaagga gcaaggagta gaaaggagga aaataaagaa 481 aagtgagaaa gtgacaccca agacttcagt tctgtcattg aaaaggtgtt gaagcaacat 541 gttgcacacg atgcagctgc tcctgctggc cactattgtg ggcatggtca ggagctcgcc 601 gtacacgagc tatcagaacc aacggttcgc catggagccg caggatcaga cggcagtggt 661 tggggccagg gtaacgctac cctgccgagt gatcaacaaa cagggcacgc tccaatggac 721 caaggatgac tttggacttg gcacgtcccg ggatctgagt ggattcgaac gctacgcgat 781 ggtgggcagt gacgaggagg gtgactactc cctggacatt tatccagtga tgctggacga 841 cgatgctcgt taccagtgcc aagtgagccc aggtcccgag ggccaaccag ccattaggtc 901 cacattcgcc ggattgacgg tgctcgttcc gcccgaggcg cccaaaatca cacagggcga 961 cgtcatctat gccaccgagg atcgcaaagt ggagatcgag tgcgtttcgg ttggcggaaa 1021 gccggctgct gagattacct ggattgatgg cctgggcaat gtccttacgg ataacattga 1081 gtacacggtg ataccgctgc ccgatcagcg acgctttacg gccaagtccg tcctgcgatt 1141 gacccccaaa aaggaacacc acaacacgaa cttcagttgc caggcgcaga acacggcgga 1201 ccgcacctat cgctcggcga aaatacgtgt cgaggtgaaa tatgccccca aggtgaaggt 1261 gaatgtgatg ggctcgcttc ccggcggtgc aggtggttcg gttggtggtg caggcggtgg 1321 cagtgtccac atgagcaccg gttcccgtat tgtggagcat tcgcaggtgc gcttggagtg 1381 ccgggcagat gcgaatccca gcgatgtccg gtaccgctgg ttcataaacg acgaaccgat 1441 catcggcggc cagaagacag agatggtgat acgcaatgtg actcgcaagt tcaacgatgc 1501 gattgtcaag tgcgaggtgc agaattccgt gggcaagagt gaggacagcg aaacccttga 1561 cataagctat gctcccagtt tccggcagcg accacagtca atggaggcgg acgttggcag 1621 cgtggtgtcc ctaacctgcg aggtggacag caatccgcag ccggagatcg tctggataca 1681 gcatcccagt gaccgggtgg tcggcaccag cacaaatctc acattcagtg tgagcaatga 1741 gacggctgga aggtactact gcaaggccaa tgtacccgga tacgctgaga tttcggcaga 1801 tgcctatgtc tatctgaagg gctcgccggc gattggatcg cagaggacac agtacggact 1861 ggtgggagat acggctcgga tcgaatgctt tgccagcagt gttcctcgag cccgtcacgt 1921 ctcgtggacg ttcaacggcc aggagatcag ctcggaatcg ggacacgact attcgattct 1981 ggttgatgcc gtgccggggg gcgtgaagag cacgctcatc attagggaca gccaggccta 2041 ccactacgga aagtacaact gcacggtggt caacgattac ggcaacgacg tggccgagat 2101 tcagctgcaa gccaagaaga gcgtttccct gctgatgaca attgtgggcg gcatttcggt 2161 ggtggccttc ctgctggtgc tgaccatttt ggttgtggtc tacatcaagt gtaagaagcg 2221 caccaagctg ccgccagcgg atgtgataag cgagcatcag atcacgaaaa atggcggcgt 2281 tagctgcaaa ctggaaccag gcgaccggac ctcgaactac agcgatctaa aggtggacat 2341 ttcgggcggc tatgtgccct acggcgacta cagtacgcac tacagtccgc ctccgcaata 2401 cctgaccacc tgttcgacga aatccaatgg cagctcgacc attatgcaga acaaccatca 2461 gaaccaattg caactacagc agcagcagca acagagccac caccagcacc acacacagac 2521 gacgaccctg ccgatgacct tcctgaccaa cagcagcggt ggcagcttga ctggcagtat 2581 tattggatcc cgtgaaattc gccaggacaa cgggctgccc agtctgcagt cgaccaccgc 2641 ctcggtggtt agctcatcgc cgaatggcag ctgcagcaat cagagcacca ctgccgccac 2701 caccaccacc acccacgtgg tggtgcccag ctcgatggcc ctgagtgtgg atccccgcta 2761 tagcgccatt tacggcaatc cctatcttag gtcctccaac tcgtcgctgc tgccgccacc 2821 cactgccgtt tagggtggac cagcaccgtc caccaccaac accaccacca ccaccactgc 2881 caacaacaac gatgacccac tgagccacgc taagactgat ctcacaagga accgaggccc 2941 cggcggctgc ttttgggggg gtatcactgt tcgtggtggt gcgttttttc agctaccaaa 3001 aattcgaatt gcttaggttt aggcacttag ctcacataca tccgattata taggcataat 3061 cgtaagctga tctttagcat catcatttct atagtcctta ggtctagggt attttatttt 3121 atgttttttt tttttttgtc gtttttgtgt tcttagctta aggatcttac agtaggctaa 3181 tatccccagt ttgatctaga gagagactaa gcttcaaaga atgagtgtta agcatttaca 3241 gaacaaaaaa caaatcttag gaagattaga aagttttact gcttgttgag aaaacgccgt 3301 aatgtactag ttaactgatt ggggatttaa cctccagtta caagaaagaa aaaaactggt 3361 tttcttgggg gcggggatat gcgagagccg ttttgaacat gttctctgat ttcatataat 3421 gtttcaaata ttattttcga ttcaaatatt atttccgtgt ctcttattct caaaacttaa 3481 tgctcttcta tttttaaaaa atttgattgc tattttttgt acagtgtaca tgtgtacatg 3541 aaactttaga actatttcgt aacgcgtaac tctcccagag attttgaaat cccaagaata 3601 ttccttcgtc aaaaacagct gcccctatat aatccgcaaa aaatatatag aatggtaatt 3661 gaaagaattc aattttatgt atacacagct atagtatatg ctaaatgtta atgatatata 3721 tatatacaac aagcatgaag acattcagtt gaatggatag cgagtatgcg aacgaaatgc 3781 caaagtacct gatagtattt aagtaggggg tgggaaagtc tttggatcgg taccgcccgc 3841 cattaacttc ttctgaatta tgtagcatta tcttttctcg ccggaattct aagctatgac 3901 ttgggattcg atagtgtgtt ttacgattaa ataaatatag aagctagatc ttgacagtcg 3961 ccttaactta tgacacgccc atacatctca aaacgcccat gcaaatatag gaaaagaaaa 4021 caaaaatgag agcgtaaacg tattcaattc gtcagttcaa ttgtgctaag tgtacttcta 4081 agtgtataac ggtctaatta tcctagttgt agcctaacta atgatagaca cgcatattta 4141 aagtatagaa cctagcccta gatatacata catgcatttt ttttcatagg cctaagcatt 4201 atattttgat aagccagcgt atttcgtcta aggagcccct gaaaagtaaa cattactatt 4261 tcattttgct atatttatta gctgtgggta ttttattagt gtcgccaatt aagcgcgaaa 4321 cgaacaaatg ttttttgttt acaaaatgca aatgataaaa gcaaatagca gcatgaaaca 4381 cacacaaagt taaacacgaa aacaaaaagc aaaaaaaaaa ctgaataaaa atttattgta 4441 aaaaaaaaaa aaaaa //