LOCUS AY117282 1141 bp mRNA linear PLN 18-SEP-2002 DEFINITION Arabidopsis thaliana putative replication factor C (At1g77470) mRNA, complete cds. ACCESSION AY117282 VERSION AY117282.1 KEYWORDS FLI_CDNA. SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 1141) AUTHORS Yamada,K., Banh,J., Chan,M.M., Chang,C.H., Chang,E., Dale,J.M., Deng,J.M., Goldsmith,A.D., Lee,J.M., Onodera,C.S., Quach,H.L., Tang,C., Toriumi,M., Wu,H.C., Yamamura,Y., Yu,G., Bowser,L., Carninci,P., Chen,H., Cheuk,R., Hayashizaki,Y., Ishida,J., Jones,T., Kamiya,A., Karlin-Neumann,G., Kawai,J., Kim,C., Lam,B., Lin,J., Miranda,M., Narusaka,M., Nguyen,M., Palm,C.J., Sakurai,T., Satou,M., Seki,M., Shinn,P., Southwick,A., Shinozaki,K., Davis,R.W., Ecker,J.R. and Theologis,A. TITLE Arabidopsis Open Reading Frame (ORF) Clones JOURNAL Unpublished REFERENCE 2 (bases 1 to 1141) AUTHORS Yamada,K., Banh,J., Chan,M.M., Chang,C.H., Chang,E., Dale,J.M., Deng,J.M., Goldsmith,A.D., Lee,J.M., Onodera,C.S., Quach,H.L., Tang,C.C., Toriumi,M., Wu,H.C., Yamamura,Y., Yu,G., Bowser,L., Carninci,P., Chen,H., Cheuk,R., Hayashizaki,Y., Ishida,J., Jones,T., Kamiya,A., Karlin-Neumann,G., Kawai,J., Kim,C., Lam,B., Lin,J., Miranda,M., Narusaka,M., Nguyen,M., Palm,C.J., Sakurai,T., Satou,M., Seki,M., Shinn,P., Southwick,A., Shinozaki,K., Davis,R.W., Ecker,J.R. and Theologis,A. TITLE Direct Submission JOURNAL Submitted (03-JUN-2002) Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA COMMENT The RIKEN Genomic Sciences Center (GSC) members carried out the collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN Arabidopsis Full-Length cDNA'): Seki,M., Narusaka,M., Ishida,J., Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai, J., Hayashizaki,Y. and Shinozaki,K. The Salk, Stanford, PGEC (SSP) Consortium members constructed and sequenced the pUNI (ORF) clones using the RAFL cDNAs: Yamada,K., Banh,J., Chan,M.M., Chang,C.H., Chang,E., Dale,J.M., Deng,J.M., Goldsmith,A.D., Lee,J.M., Onodera,C.S., Quach,H.L., Tang,C.C., Toriumi,M., Wu,H.C., Yamamura,Y., Yu,G., Bowser,L., Chen,H., Cheuk,R., Jones,T., Karlin-Neumann,G., Kim,C., Lam,B., Lin,J., Miranda,M., Nguyen,M., Palm,C.J., Shinn,P., Southwick,A., Davis,R.W., Ecker,J.R. and Theologis,A. Yamada,K. (SSP/PGEC) and Seki, M. (RIKEN GSC) contributed equally to this work. Shinozaki,K. (RIKEN GSC) and Theologis,A. (SSP /PGEC) contributed equally to this work as PIs. Annotation is based on the January 2002 version of the Arabidopsis genome submitted to GenBank. FEATURES Location/Qualifiers source 1..1141 /organism="Arabidopsis thaliana" /mol_type="mRNA" /db_xref="taxon:3702" /chromosome="1" /clone="U11982" /ecotype="Columbia" /note="This clone is in pUNI 51." gene 1..1141 /gene="At1g77470" CDS 1..1110 /gene="At1g77470" /experiment="experimental evidence, no additional details recorded" /codon_start=1 /product="putative replication factor C" /protein_id="AAM51357.1" /translation="MTELTSAMDIDVDEIQPRKPINKGKDVVGFGPPPQSKATPWVEK YRPQSLDDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGPKYR NMILELNASDDRGIDVVRQQIQDFASTQSFSLGKSSVKLVLLDEADAMTKDAQFALRR VIEKYTKSTRFALIGNHVNKIIPALQSRCTRFRFAPLDGVHMSQRLKHVIEAERLVVS DCGLAALVRLSNGDMRKALNILQSTHMASKEITEEESKQITEEDVYLCTGNPLPKDIE QISHWLLNKPFDECYKDVSEIKTRKGLAIVDIVKEITLFIFKIKMPSAVRVQLINDLA DIEYRLSFGCNDKLQLGAIISTFTHARSIIVGAAK" 3'UTR 1111..1141 /gene="At1g77470" BASE COUNT 336 a 231 c 270 g 304 t ORIGIN 1 atgactgagc taacgtcggc gatggacatt gacgtagacg aaattcagcc tcgcaagccg 61 ataaacaagg gcaaagacgt cgtcggtttt ggacctccgc cgcagagtaa ggcgacgcct 121 tgggttgaga agtatcgacc tcagtcgctt gatgacgtgg ctgcacatcg tgacattatt 181 gatacgattg ataggctgac caatgagaac aaattgcccc atcttctgtt gtatggtcct 241 cccggtactg gcaaaacatc caccattcta gctgttgccc ggaaactata tggaccaaag 301 taccggaata tgattcttga actgaacgca tcagacgata gaggaatcga tgttgtaagg 361 cagcagattc aagatttcgc tagcacgcag agtttctctt taggaaaatc ttcggtgaag 421 ttggttttgc tagatgaagc agatgccatg acaaaagatg ctcagtttgc cttgcgtaga 481 gtgattgaga aatacactaa gagtactagg tttgcgctca ttggaaacca tgtcaataag 541 atcatcccag ctttgcagtc gagatgtact cgatttagat ttgcccctct tgatggagtt 601 catatgagtc aacgtcttaa acatgtaata gaagctgaaa ggcttgttgt aagtgactgt 661 ggtttggcag ctcttgtacg gctgagcaat ggggacatga gaaaagcatt gaacattttg 721 cagtcaacgc atatggcgtc aaaggaaatt acagaggaag agtcaaagca aattacagag 781 gaagacgttt acctctgcac cggaaaccca ttgcccaagg acattgagca gatatctcac 841 tggcttctga ataaaccatt tgatgagtgc tacaaagacg tttcagaaat caagacgaga 901 aaaggacttg ccattgttga tatcgtcaaa gagattacct tgtttatttt taaaatcaag 961 atgccttccg ctgtcagagt tcaactgata aacgatttgg cagacattga gtacagatta 1021 agttttggtt gcaacgacaa actgcagctt ggagctatca tttctacttt cacacatgcc 1081 cggtctatca ttgttggtgc agcaaagtaa accatgtttt taccattttg gaacccgcag 1141 t //