LOCUS AY075410 2639 bp mRNA linear INV 01-FEB-2002 DEFINITION Drosophila melanogaster LD33841 full length cDNA. ACCESSION AY075410 VERSION AY075410.1 KEYWORDS FLI_CDNA. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 2639) AUTHORS Stapleton,M., Brokstein,P., Hong,L., Agbayani,A., Carlson,J., Champe,M., Chavez,C., Dorsett,V., Dresnek,D., Farfan,D., Frise,E., George,R., Gonzalez,M., Guarin,H., Kronmiller,B., Li,P., Liao,G., Miranda,A., Mungall,C.J., Nunoo,J., Pacleb,J., Paragas,V., Park,S., Patel,S., Phouanenavong,S., Wan,K., Yu,C., Lewis,S.E., Rubin,G.M. and Celniker,S. TITLE Direct Submission JOURNAL Submitted (18-JAN-2002) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, Berkeley, CA 94720, USA COMMENT Sequence submitted by: Berkeley Drosophila Genome Project Lawrence Berkeley National Laboratory Berkeley, CA 94720 This clone was sequenced as part of a high-throughput process to sequence clones from Drosophila Gene Collection 1 (Rubin et al., Science 2000). The sequence has been subjected to integrity checks for sequence accuracy, presence of a polyA tail and contiguity within 100 kb in the genome. Thus we believe the sequence to reflect accurately this particular cDNA clone. However, there are artifacts associated with the generation of cDNA clones that may have not been detected in our initial analyses such as internal priming, priming from contaminating genomic DNA, retained introns due to reverse transcription of unspliced precursor RNAs, and reverse transcriptase errors that result in single base changes. For further information about this sequence, including its location and relationship to other sequences, please visit our Web site (http://fruitfly.berkeley.edu) or send email to cdna@fruitfly.berkeley.edu. FEATURES Location/Qualifiers source 1..2639 /organism="Drosophila melanogaster" /mol_type="mRNA" /strain="y; cn bw sp" /db_xref="taxon:7227" /map="10B10-10B11" gene 1..2639 /gene="CG1730" /note="alignment with genomic scaffold AE003485. longest ORF does not completely overlap gene" /db_xref="FLYBASE:FBgn0030295" CDS 803..1429 /gene="CG1730" /note="Longest ORF" /codon_start=1 /product="LD33841p" /protein_id="AAL68235.1" /db_xref="FLYBASE:FBgn0030295" /translation="MPVKKQEAHRALELLEDYHARLSEPQDRALRIAIERVIRIFKSR LFQALLDIQEFYELTLLDDSKSIQQKTAETLQIATKWEKDGQAVKIADNQRMRIESDT ENAKEPTVEQQQKQQQAQQRSSRSPQQQNPQQQQGSKSRSGSQTSQIQIQSLTQTYPN AHQRKRVLVSLHPHQHQHQSQIQHQHHYQLRHNNGIQAKMLKRAFEST" BASE COUNT 924 a 559 c 500 g 656 t ORIGIN 1 ctagaactag tgttcccgtg agcagagcag aaaaccgtaa tatatattct ccaacgtgct 61 gccgctactt atttatatta aacataaaat gcccgaaggc tgtgccaaac gcatgtcctt 121 tttgccaatg gtgaatgcaa tatagaatca aatcaagtga acgcgaagta agcaaataaa 181 cgatctgagt ttttttttgt gttggtgttg ttgtgttgtg acgaggaaag tacgacattt 241 cgatgatagt cgcattgcaa tataaagtgc aacataaatg ctatagaacc gaatgtgaat 301 gtgaggagcc attgagctgt gaaatgtgaa aatcgcaaag aaatcgagag aaaacgcaca 361 cgtcaatgta accacaaagc tgccccaaga aaacgaaaag taaaatatat aaagaaatta 421 aaaaataaac tagcaaactg aaagcgcaaa attaaaaaaa aaacaacaaa tctcgaactt 481 tgttcgaaag ccaaagtatc taacaaaaca atatttgtac ataaaacacc atcgaatagt 541 atatatatat atatacatat atatcagata tatatacaga tgtgctggcg aaactaaaag 601 gaggagaact caaggaaaag ccaaagcgat ttttccgcac atttccactc gaaagcgact 661 ccagtaaatt ctcaaaattg cgacccacgc ttttcccagt tcggcggcgt tgaaccacaa 721 tcaaagctgc tgcaccaccg ccatttccgc tgccatttcc accagcacca ccataaatag 781 tagcagaaac accgctcaca gaatgccagt gaaaaagcaa gaagctcatc gggctctcga 841 gctgctcgag gactaccacg cgagactttc ggagccgcag gatcgggcgc tgcgtattgc 901 aatcgaacgc gttatacgca tatttaaatc tcgcttgttt caagcgctgt tagatataca 961 agaattctat gaattgacat tattggatga ctcgaagagc atacaacaaa agacagcgga 1021 gaccttgcaa attgcaacca aatgggaaaa ggatggccag gcagtcaaaa tagctgataa 1081 tcagcgcatg cgcatcgaat cggacacgga aaatgccaag gagccaactg tcgagcagca 1141 gcaaaagcag cagcaagcgc agcagcgcag ttcccgctcc ccgcagcagc agaatccgca 1201 gcagcagcag ggatccaaat cgaggagcgg gtcccagact tcacagatac agatacagtc 1261 acttacacag acatacccaa acgcacacca gcgcaagcga gtcctcgtga gcctccatcc 1321 acatcaacat caacatcaaa gccaaattca acaccaacac cattaccaac ttcgccataa 1381 caacggcatt caagccaaaa tgcttaagcg cgcttttgag tccacctagt tttaccccgc 1441 cattttcccg gcgtggaaaa gtcctcgagg gcagagcaat cagctcgcgg aaaagccaag 1501 gaggtggaaa acagctggct gtgtaattag cccccccccc cctctgctca aagaattcat 1561 tagttcgcaa tttcgaggct gctcccattt gcacttcatt tcgggtcttc acaaaagaat 1621 caaacaaatt aattaatttt tcggaggctt tgattaaatt gctcaacatt taactcattt 1681 aacgcataag gttgaaaata tcgttgttgc tacattttgt gattaattaa aaaacgatgc 1741 aaccatagtt tatcgctaag ttaagctaaa ttcaaaccgt cttattcata ttgtttaata 1801 tatgaggcga ccaaaatgag gacaaagata cccaccttcc actaacattc cgtatgataa 1861 atacattgct ctagtttttt gccaggaatc gagtcaaaga ccggatttag tgccatattc 1921 agacaacaga tggaatttga attcgatttt ttaagttgca tgttacactg caaccgcatt 1981 ttcagcttaa ttattcatgt ggcacggaac gtgggcggta acgcccacaa ttttaaatcg 2041 ccattggtga ggccagtgta attgggagca cgccagtgta tttatccgcc tttttgccca 2101 ttttcctggc tttttaacga atcgttactt acttaagacg cttaaggcgc tcggccttct 2161 cgcttttgtg ggccaagcgt cgcccatttc cgtttccggt gcgctgttgt tgttgctcgt 2221 tgtagctaaa ctggccagaa ggagaaagta catatagcaa cgagaacggg aaaactgcca 2281 acgggcgtaa cacattttct ttatattaaa gctaacgata tttatactaa gtttttagtg 2341 cacgattttg tttgattagt gcttactagc gaataaggta cattgtgaaa gacattaaat 2401 caagcttatt tataatttta gcttaagttt ggtgcatgtt ttggttatta ataatgtttt 2461 aagttgccaa attaaatttg attttgattt aagaaacata ccatgtgaac cccatttaaa 2521 aaatatacat acattttgcg cttcttaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2581 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa //