LOCUS AY074306 3386 bp mRNA linear PLN 18-SEP-2002 DEFINITION Arabidopsis thaliana unknown protein (At4g34420) mRNA, complete cds. ACCESSION AY074306 VERSION AY074306.1 KEYWORDS FLI_CDNA. SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 3386) AUTHORS Yamada,K., Liu,S.X., Sakano,H., Pham,P.K., Banh,J., Chung,M.K., Goldsmith,A.D., Lee,J.M., Quach,H.L., Toriumi,M., Yu,G., Bowser,L., Carninci,P., Chen,H., Cheuk,R., Hayashizaki,Y., Ishida,J., Jones,T., Kamiya,A., Karlin-Neumann,G., Kawai,J., Kim,C., Lam,B., Lin,J., Miranda,M., Narusaka,M., Nguyen,M., Palm,C.J., Sakurai,T., Satou,M., Seki,M., Shinn,P., Southwick,A., Shinozaki,K., Davis,R.W., Ecker,J.R. and Theologis,A. TITLE Arabidopsis Full Length cDNA Clones JOURNAL Unpublished REFERENCE 2 (bases 1 to 3386) AUTHORS Yamada,K., Banh,J., Chan,M.M., Chang,C.H., Chang,E., Dale,J.M., Deng,J.M., Goldsmith,A.D., Lee,J.M., Onodera,C.S., Quach,H.L., Tang,C.C., Toriumi,M., Wu,H.C., Yamamura,Y., Yu,G., Bowser,L., Carninci,P., Chen,H., Cheuk,R., Hayashizaki,Y., Ishida,J., Jones,T., Kamiya,A., Karlin-Neumann,G., Kawai,J., Kim,C., Lam,B., Lin,J., Meyers,M.C., Miranda,M., Narusaka,M., Nguyen,M., Palm,C.J., Sakurai,T., Satou,M., Seki,M., Shinn,P., Southwick,A., Shinozaki,K., Davis,R.W., Ecker,J.R. and Theologis,A. TITLE Direct Submission JOURNAL Submitted (11-JAN-2002) Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA COMMENT RIKEN Genomic Sciences Center (GSC) members carried out the collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN Arabidopsis Full-Length cDNA'): Seki,M., Narusaka,M., Ishida,J., Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J., Hayashizaki,Y. and Shinozaki,K. The Salk, Stanford, PGEC (SSP) Consortium members carried out the sequencing and annotation of the RAFL cDNAs: Yamada,K., Banh,J., Chan,M.M., Chang,C.H., Chang,E., Dale,J.M., Deng,J.M., Goldsmith,A.D., Lee,J.M., Onodera,C.S., Quach,H.L., Tang,C.C., Toriumi,M., Wu,H.C., Yamamura,Y., Yu,G., Bowser,L., Chen,H., Cheuk,R., Jones,T., Karlin-Neumann,G., Kim,C., Lam,B., Lin,J., Meyers,M.C., Miranda,M., Nguyen,M., Palm,C.J., Shinn,P., Southwick,A., Davis,R.W., Ecker,J.R. and Theologis,A. Yamada,K. (SSP/PGEC) and Seki,M. (RIKEN GSC) contributed equally to this work. Shinozaki,K. (RIKEN GSC) and Theologis,A. (SSP/PGEC) contributed equally to this work as PIs. Annotation is based on the January 2002 version of the Arabidopsis genome submitted to GenBank. FEATURES Location/Qualifiers source 1..3386 /organism="Arabidopsis thaliana" /mol_type="mRNA" /db_xref="taxon:3702" /chromosome="4" /clone="RAFL09-93-H05 (R19881)" /ecotype="Columbia" /note="This clone is in a modified pBluescript vector (FLC-1) as a BamHI/XhoI insert." gene 1..3386 /gene="At4g34420" 5'UTR 1..149 /gene="At4g34420" CDS 150..3107 /gene="At4g34420" /experiment="experimental evidence, no additional details recorded" /note="This cDNA contains the coding regions of two annotated genes (At4g34420, GI:15235368 and At4g34430, GI:15235371). Presumably there is only one gene instead of two and we named this cDNA to be encoded by At4g34420." /codon_start=1 /product="unknown protein" /protein_id="AAL67003.1" /translation="MEEKRRDSAGTLAFAGSSGDSPASEPMPAPRRRGGGLKRKANAL GGSNFFSSAPSKRMLTREKAMLASFSPVHNGPLTRARQAPSIMPSAADGVKSEVLNVA VGADGEKPKEEEERNKAIREWEALEAKIEADFEAIRSRDSNVHVVPNHCGWFSWEKIH PLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQIELKDLTELEVGDSEAK QEVMEFLDYWGLINFHPFPPTDTGSTASDHDDLGDKESLLNSLYRFQVDEACPPLVHK PRFTAQATPSGLFPDPMAADELLKQEGPAVEYHCNSCSADCSRKRYHCPKQADFDLCT ECFNSGKFSSDMSSSDFILMEPAEAPGVGSGKWTDQETLLLLEALEIFKENWNEIAEH VATKTKAQCMLHFLQMPIEDAFLDQIDYKDPISKDTTDLAVSKDDNSVLKDAPEEAEN KKRVDEDETMKEVPEPEDGNEEKVSQESSKPGDASEETNEMEAEQKTPKLETAIEERC KDEADENIALKALTEAFEDVGHSSTPEASFSFADLGNPVMGLAAFLVRLAGSDVATAS ARASIKSLHSNSGMLLATRHCYILEDPPDNKKDPTKSKSCSADAEGNDDNSHKDDQPE EKSKKAEEVSLNSDDREMPDTDTGKETQDSVSEEKQPGSRTENSTTKLDAVQEKRSSK PVTTDNSEKPVDIICPSQDKCSGKELQEPLKDGNKLSSENKDASQSTVSQSAADASQP EASRDVEMKDTLQSEKDPEDVVKTVGEKVQLAKEEGANDVLSTPDKSVSQQPIGSASA PENGTAGGNPNIEGKKEKDICEGTKDKYNIEKLKRAAISAISAAAVKAKNLAKQEEDQ IRQLSGSLIEKQLHKLEAKLSIFNEAESLTMRVREQLERSRQRLYHERAQIIAARLGV PPSMSSKASLPTNRIAANFANVAQRPPMGMAFPRPPMPRPPGFPVPGSFVAATTMTGS SDPSPGSDNVSSV" 3'UTR 3108..3386 /gene="At4g34420" misc_feature 3370 /gene="At4g34420" /note="artifact within poly A tail" BASE COUNT 1055 a 648 c 834 g 849 t ORIGIN 1 gagagttaaa aatgcaaaaa cggtgaaggg gaagagaagc gaaattgggg gattgggaat 61 agcaacgttt tgcaaatggt ctcttctttg tagctgcaat tgcaaagaac actgagagag 121 agagagagtg tgtgtgtgac ctttgagaga tggaggaaaa acgacgcgat tctgctggaa 181 ccctagcttt tgctggtagc tctggagatt ctccggcatc tgagccgatg ccggcgccac 241 ggcgacgcgg cggaggtttg aaaaggaaag cgaatgctct tgggggttct aatttcttct 301 cttctgcgcc gtcgaagagg atgttgacgc gtgagaaggc gatgcttgct tctttttctc 361 cggtacataa tgggccttta actagagctc gtcaggcgcc gagtattatg ccctcggcgg 421 cggatggggt taagtcggag gttttgaatg tagcggtggg tgcggatgga gagaagccca 481 aggaggagga agagaggaat aaggcgatcc gtgagtggga ggctttggag gctaagatcg 541 aagctgattt tgaagcaatt agatctcgtg acagtaatgt tcatgtggtg cctaatcatt 601 gcggttggtt ttcatgggaa aaaattcacc cgcttgagga acgttcattg ccctctttct 661 tcaatggcaa gttggagggt cgcacttctg aggtatatag ggaaatacgg aattggatca 721 tggggaagtt tcattccaat ccaaacatac aaatagaatt aaaagactta acagaactcg 781 aggttggaga ctcggaagca aagcaagagg tgatggagtt cttggactac tggggcttaa 841 tcaatttcca cccatttcca ccaacagata ctggttcaac agcctctgat catgatgatt 901 taggggataa ggagtcactg cttaacagtt tatatcgatt tcaagtagat gaggcttgcc 961 ctcctcttgt tcacaagcct cgtttcacag cacaagctac tccatcaggg ttgtttcctg 1021 atccgatggc tgctgatgaa ttgctgaaac aagagggtcc agcggtcgaa tatcactgca 1081 attcctgttc agctgattgc tctcgcaagc gctaccactg cccgaaacag gcagattttg 1141 acttatgcac ggaatgcttt aacagtggca agttcagctc agatatgtca tcttctgatt 1201 ttatactaat ggaacctgct gaggcccctg gcgttggtag tgggaagtgg actgatcaag 1261 agactcttct tctccttgaa gctttagaaa tcttcaagga aaattggaat gagattgcag 1321 agcatgttgc tacaaaaaca aaagctcagt gtatgcttca ttttcttcaa atgccaatcg 1381 aggatgcgtt tcttgatcaa attgactaca aagatccaat ctcaaaagac actacagatt 1441 tagctgtgtc taaagatgat aattctgtcc ttaaagatgc acctgaagag gcagagaaca 1501 agaaacgtgt tgatgaagat gaaactatga aagaagttcc agaaccagaa gatggcaatg 1561 aagaaaaagt ctctcaggaa tcttcaaagc ctggagatgc gagtgaagaa actaatgaaa 1621 tggaagcaga gcagaaaaca cccaagttag agaccgccat tgaagaaaga tgtaaagatg 1681 aggctgacga aaacattgct ctgaaagctc ttactgaagc ttttgaggat gttggacatt 1741 cctccacacc tgaagcctct ttttcctttg ctgatttagg aaaccctgtc atgggactgg 1801 cagcctttct agtgagattg gcaggatctg atgttgctac tgcgtcagct cgggcttcca 1861 ttaaatctct tcacagcaat tctgggatgt tgcttgccac acgacattgt tatattctgg 1921 aagatccacc agacaacaag aaggatccaa ctaaatcaaa aagttgcagt gctgatgcag 1981 aggggaatga tgataattcc cataaagatg atcagccaga agaaaaaagc aaaaaagcag 2041 aagaggtctc cttaaattca gatgataggg aaatgccaga tactgataca ggcaaagaaa 2101 ctcaggattc agtctctgaa gaaaagcaac ccggttctcg aactgaaaat tctactacaa 2161 aactagatgc tgtgcaagaa aaaagatcta gtaagccagt tacaactgac aattctgaga 2221 aaccagtgga tataatatgt ccgtcgcagg acaaatgttc agggaaggag cttcaagaac 2281 ctttgaagga tgggaataag ctttctagtg aaaataaaga cgcctctcag tcaactgtct 2341 cccagtcagc tgcagatgct tctcagccag aagcatcaag agatgtggaa atgaaggata 2401 ctctacagtc agagaaggat cctgaagatg tggtcaaaac agtaggagaa aaggttcaac 2461 tggctaagga ggagggtgca aatgatgttc ttagtactcc agacaagtct gtttcacagc 2521 agcccattgg atcagcttct gcaccggaaa atggaacagc tggtggaaat ccaaatatag 2581 aaggaaagaa agagaaggat atttgtgaag ggacaaaaga caaatataac atcgagaagc 2641 ttaagcgcgc agccatctct gctatctcag ccgcagcagt aaaagcaaag aatcttgcaa 2701 agcaagaaga agatcaaatc cgacaacttt cgggatcatt gatagagaag cagctacata 2761 aactagaagc aaagctatct atcttcaatg aagctgaaag cttgacaatg agggtaagag 2821 agcaattaga aaggtcaagg caacggctat atcatgaaag ggctcagatc atagcagctc 2881 gactaggtgt cccaccttca atgtcctcaa aagcatcgtt accaacaaac agaatcgctg 2941 caaattttgc taatgtagct caaaggcctc caatgggcat ggcctttcca cgcccaccaa 3001 tgccaaggcc cccaggtttc cctgttcctg gttcttttgt agctgctaca acaatgaccg 3061 gaagttcaga tccatctcca ggttcagaca atgtttcttc ggtttagtgg tcccacatta 3121 tagtgttaag atttgcaggg tagctcttcg tgatgttctc tatttataag ccaaggagac 3181 ggtgatatgg ggaagttagt taggggtttt agacccatcg attaatgttt aatgtaactg 3241 tcaaatgaaa ctttcggaga tctgtgaatg tgtttttatg gttctttcaa ctttaatgaa 3301 ttgtaacgtt gacgagagat atatgattcc gcaaaaggtg ggaatgtctt atttttttct 3361 ttaaaaaaag aaaaaaaaaa aaaaaa //