LOCUS AY069664 3199 bp mRNA linear INV 17-DEC-2001 DEFINITION Drosophila melanogaster LD44138 full length cDNA. ACCESSION AY069664 VERSION AY069664.1 KEYWORDS FLI_CDNA. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 3199) AUTHORS Stapleton,M., Brokstein,P., Hong,L., Agbayani,A., Carlson,J., Champe,M., Chavez,C., Dorsett,V., Farfan,D., Frise,E., George,R., Gonzalez,M., Guarin,H., Li,P., Liao,G., Miranda,A., Mungall,C.J., Nunoo,J., Pacleb,J., Paragas,V., Park,S., Phouanenavong,S., Wan,K., Yu,C., Lewis,S.E., Rubin,G.M. and Celniker,S. TITLE Direct Submission JOURNAL Submitted (10-DEC-2001) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, Berkeley, CA 94720, USA COMMENT Sequence submitted by: Berkeley Drosophila Genome Project Lawrence Berkeley National Laboratory Berkeley, CA 94720 This clone was sequenced as part of a high-throughput process to sequence clones from Drosophila Gene Collection 1 (Rubin et al., Science 2000). The sequence has been subjected to integrity checks for sequence accuracy, presence of a polyA tail and contiguity within 100 kb in the genome. Thus we believe the sequence to reflect accurately this particular cDNA clone. However, there are artifacts associated with the generation of cDNA clones that may have not been detected in our initial analyses such as internal priming, priming from contaminating genomic DNA, retained introns due to reverse transcription of unspliced precursor RNAs, and reverse transcriptase errors that result in single base changes. For further information about this sequence, including its location and relationship to other sequences, please visit our Web site (http://fruitfly.berkeley.edu) or send email to cdna@fruitfly.berkeley.edu. FEATURES Location/Qualifiers source 1..3199 /organism="Drosophila melanogaster" /mol_type="mRNA" /strain="y; cn bw sp" /db_xref="taxon:7227" /map="90F7-90F7" gene 1..3199 /gene="l(3)05822" /note="alignment with genomic scaffold AE003721" /db_xref="FLYBASE:FBgn0010877" CDS 666..2468 /gene="l(3)05822" /note="Longest ORF" /codon_start=1 /product="LD44138p" /protein_id="AAL39809.1" /db_xref="FLYBASE:FBgn0010877" /translation="MTIPSRPAPAPPGSRGQSAAAGANASLEQLRLQLQQQHLQQQQG AGGGLQKLTIKLPPPPKGPLQSQHKRTTVSNNNNGSLFDEPTGGTSITRKFPQARYTP ATNWDDDPFGGGSNGNDRFKKMPPPRPPPPKVLVNGQNMTKSNSSMASAVTGGTGRLM SNIFHRKKSTSTASAAASKAAAENRVYGLSSGNAGATPSNNSSSSASSAAFSNVDWNA AWNTATTTTTTTSSSSHSSHYASQQTADAQLISFDSPPSSPTFTQKSNSDCVSVDSFS SDSNFSSPNNGSVSQPESGFEDDYHRSRPSTQSPLDPWEAVDSVGLGGVDSFGSAPVR QTYQVQSRGSDNPLCNGKSLLPPTQSLTMPTIIKPKISQKPKAPKPPPFIGGHLPPGY SIPSGYAGSETPPSPPMPKGPPPPPPPASSGGISLLDVINGKVDALALSNGCQGYMEE EVVPYAVALYDFDGIEPGDLSFREGEKIYLLDHPTPEWLRGRTRSGCEGIFPINYVDI KVPLGATGGAAAAPTASAAAPSPSPSQQQLPTALCLYHFPGEVEGDLALQENELVTVL YRINEDWLYGEVAGRQGQFPANFLDQVPANLPTL" BASE COUNT 849 a 823 c 788 g 739 t ORIGIN 1 tgaaaaacat cgacgcatat caaggccgac aaatatcgct attaaatgca cagctgaaag 61 cgattcgtgc agcacgtcgt tgaattgaat taaattcgtt atgggaaagt gccttggtgt 121 gtgtgtgcgt gcgtataatt aagcaaaagt atttagcaaa tcgaaggcgc acatttcgca 181 atacacgctg cgaaataatc gggtgataat tgtcgcagct gcaggcgcac ttccttctcc 241 atctcctgct ttcttcgttt ttgtctctgc ggatacgtgc tactactttt gcagctgctg 301 ttcagctatt tagcgcgtgt gtgtgagtgc gctccgcggc tgctgctgtt gttgtttttg 361 ttggctcacc tctcgttaac caccttgaat gcgagtgaac gagcgagagg gggtgagaag 421 agtgcaaagt tgatgcccgc gagtgtgcgc ttgtctctct gtgtgtgtat gacaacaaat 481 tgagtgcgac tgtgtgcgtg cggcattagt cactctcttt aacttttaac tgttttggtc 541 caccctctgc gaaccaaaaa ggcaaagaca aaaaaaaacc actaaaccaa ctttgcggat 601 cggttttttt tttttgaatc gaaacgaatc ggatcggaac gaatcggaaa tcaccaaaag 661 atagcatgac cattccatcg agaccggcgc ccgcaccgcc cggatcacgt ggccagagcg 721 cagcggctgg ggcaaatgcc agcctggaac agctgcgtct ccagctgcag cagcagcacc 781 tgcagcaaca gcaaggcgcc ggcggtggac tccaaaagct gaccatcaag ctgccgccac 841 cgcccaaggg accgctgcag tcgcagcaca aacgtaccac cgtcagcaac aataacaacg 901 gcagcctctt cgacgagcca acgggtggca cgagcattac gcggaagttt ccacaggcac 961 gctacacgcc ggccaccaac tgggacgacg atccatttgg aggcgggagc aacggaaatg 1021 atcgcttcaa gaagatgcca ccgccgcgac cgccgccgcc caaggtgctg gtcaatgggc 1081 agaacatgac caagtccaac tcctcgatgg catcggcggt cactggcggc acgggcagac 1141 tcatgtcgaa cattttccat cgcaagaagt cgacgtccac ggcatccgcc gctgcttcca 1201 aggctgcagc ggaaaatcgt gtctacggcc tgagcagcgg caatgccggt gcaacaccaa 1261 gtaacaacag cagcagcagt gcatcgtcgg cggcctttag caatgtggat tggaatgcag 1321 cgtggaacac ggccaccact accacaacca ccacctcgag cagcagccac agctcccatt 1381 atgcctcgca gcagacggcc gatgcgcagc tcatcagctt cgattcgccc ccttcgtcgc 1441 caacctttac ccagaagtcc aatagcgact gcgtcagcgt ggacagcttc agttcggaca 1501 gcaactttag ttcgcccaac aatggcagcg tttcgcagcc ggagagcgga ttcgaggacg 1561 attatcatcg atcacgaccc tccacacaga gtccgctgga tccgtgggag gcggtggata 1621 gcgttggact cgggggagtc gatagctttg gctccgcccc agtgcgtcag acgtaccaag 1681 tgcagtcgcg cggctcggac aatccgctgt gcaatggcaa gagtctgttg ccgcccactc 1741 aatcgcttac catgcccacc atcatcaagc ccaagatatc gcaaaagcca aaggctccga 1801 aaccaccgcc atttattggg ggccatttgc cgccaggtta tagcatacca tcaggttacg 1861 caggatcgga gacaccacca tcgccgccga tgcccaaagg accaccacca ccgccgccgc 1921 cggcatctag cggaggaatc tcactgctgg acgtgatcaa cgggaaagtg gatgcgctag 1981 cgctcagcaa cggatgccag ggctacatgg aggaggaagt ggttccttac gccgttgcgc 2041 tttacgattt cgatggcatc gagccgggcg atcttagttt tagagaaggc gagaaaatct 2101 atctgttgga ccatcccacg ccggagtggt tgcgcggacg cacgcgttcc ggatgtgagg 2161 gcatttttcc aattaactac gtggacatca aggtgccatt gggggccact ggtggcgctg 2221 ctgcagctcc aaccgctagt gctgcagcac cgtcacccag tccgtcacaa cagcaactgc 2281 cgacggcgct ttgtttgtat cacttcccgg gcgaagtcga aggagatctc gccttgcagg 2341 agaacgaatt ggttacagtg ctttatagga ttaacgagga ttggctgtac ggcgaggtgg 2401 cgggtcgtca gggacagttt ccggccaact tcctggacca ggtgcccgcc aatctgccta 2461 cgttgtaacc ataattagcc cccgatcttt aacgatctat aaattgtata cccgaaacat 2521 tgtcgataag cgagtagatg tcgagcgaac tgaatcatat acacacacac atatatataa 2581 tattattttt actatattct tttcgaaaaa tcttatgaat cgagcatata gtctaagaca 2641 actagtttgt aagcgaaaaa tcgaaaaatg ttttatatgg gtgtattgga aacatgccca 2701 tccctctcct acccgcttat acacgggatc gatgtattga ttttatgttc aacccgcgaa 2761 tgaaactgtt tagttaacta aataattcta tatatatgta ttagaaatga tttgctgatc 2821 cttaaagtat tcgcccagcc ccatagaccc caacacaata gagcaggcaa aaaatattgt 2881 atataagtta aaatgtacgt gatttctatt aatgtttaat tatttaaatt gagtttagtt 2941 agacgcttag ttaggcacat ttacagattc caatttacga tgcaagccgt ttgtttatgt 3001 atgtattaat aattctttca aatgcttagg gcaattcatc tccgagtgag aagatgaatg 3061 gttatttatt tgtcccttgc agagtgctac tctcacaatt cgtaggactt atcgctaata 3121 aaaaaatatc aggatatcct agcagtgaag aatgtaaacc gaaataaatg aagatgatca 3181 caaaaaaaaa aaaaaaaaa //