LOCUS AY057501 2143 bp mRNA linear PLN 07-OCT-2001 DEFINITION Arabidopsis thaliana AT5g64440/T12B11_3 mRNA, complete cds. ACCESSION AY057501 VERSION AY057501.1 KEYWORDS FLI_CDNA. SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 2143) AUTHORS Cheuk,R., Chen,H., Kim,C.J., Koesema,E., Meyers,M.C., Banh,J., Bowser,L., Carninci,P., Dale,J.M., Goldsmith,A.D., Hayashizaki,Y., Ishida,J., Jiang,P.X., Jones,T., Kamiya,A., Karlin-Neumann,G., Kawai,J., Lam,B., Lee,J.M., Lin,J., Liu,S.X., Miranda,M., Narusaka,M., Nguyen,M., Onodera,C.S., Palm,C.J., Pham,P.K., Quach,H.L., Sakurai,T., Satou,M., Seki,M., Southwick,A., Tang,C.C., Toriumi,M., Yamada,K., Yamamura,Y., Yu,G., Yu,S., Shinozaki,K., Davis,R.W., Theologis,A. and Ecker,J.R. TITLE Arabidopsis cDNA clones JOURNAL Unpublished REFERENCE 2 (bases 1 to 2143) AUTHORS Cheuk,R., Chen,H., Kim,C.J., Koesema,E., Meyers,M.C., Banh,J., Bowser,L., Carninci,P., Dale,J.M., Goldsmith,A.D., Hayashizaki,Y., Ishida,J., Jiang,P.X., Jones,T., Kamiya,A., Karlin-Neumann,G., Kawai,J., Lam,B., Lee,J.M., Lin,J., Liu,S.X., Miranda,M., Narusaka,M., Nguyen,M., Onodera,C.S., Palm,C.J., Pham,P.K., Quach,H.L., Sakurai,T., Satou,M., Seki,M., Southwick,A., Tang,C.C., Toriumi,M., Yamada,K., Yamamura,Y., Yu,G., Yu,S., Shinozaki,K., Davis,R.W., Theologis,A. and Ecker,J.R. TITLE Direct Submission JOURNAL Submitted (19-SEP-2001) Salk Institute Genomic Analysis Laboratory (SIGnAL), Plant Biology Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey Pines Road, La Jolla, CA 92037, USA COMMENT RIKEN Genomic Sciences Center (GSC) members carried out the collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN Arabidopsis Full-Length cDNA') : Seki,M., Narusaka,M., Ishida,J., Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J., Hayashizaki,Y. and Shinozaki,K. The Salk, Stanford, PGEC (SSP) Consortium members carried out the sequencing and annotation of the RAFL cDNAs: Cheuk,R., Chen,H., Kim,C.J., Koesema,E., Meyers,M.C., Shinn,P., Banh,J. Bowser,L., Dale,J.M., Goldsmith,A.D., Jiang,P.X., Jones,T., Karlin-Neumann,G., Lam,B., Lee,J.M., Lin,J., Liu,S.X., Miranda,M., Nguyen,M., Onodera,C.S., Palm,C.J., Pham,P.K., Quach,H.L., Southwick,A., Tang,C.C., Toriumi,M., Yamada,K., Yamamura, Y., Yu,G., Yu,S., Davis,R.W., Theologis,A., and Ecker,J.R. Cheuk,R. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to this work. Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk) contributed equally to this work as PIs. FEATURES Location/Qualifiers source 1..2143 /organism="Arabidopsis thaliana" /mol_type="mRNA" /db_xref="taxon:3702" /chromosome="5" /clone="RAFL09-09-J23(R14580)" /ecotype="Columbia" 5'UTR 1..875 misc_difference 505 /note="compared to genome" /replace="t" CDS 876..1949 /note="glutamyl-tRNA amidotransferase submunit A" /codon_start=1 /product="AT5g64440/T12B11_3" /protein_id="AAL09742.1" /translation="MHELGMGTTGNNSNYGTTRNPHDPKRYTGGSSSGSAAIVAAGLC SAALGTDGGGSVRIPSALCGITGLKTTYGRTDMTGSLCEGGTVEIIGPLASSLEDAFL VYAAILGSSSADRYNLKPSPPCFPKLLSHNGSNAIGSLRLGKYTKWFNDVSSSDISDK CEDILKLLSNNHGCKVVEIVVPELEEMRAAHVISIGSPTLSSLTPYCEAGKNSKLSYD TRTSFAIFRSFSASDYIAAQCLRRRLMEYHLNIFKDVDVIVTPTTGMTAPVIPPDALK NGETNIQVTTDLMRFVLAANLLGFPAISVPVGYDKEGLPIGLQIMGRPWAEATVLGLA AAVEELAPVTKKPAIFYDILNTN" misc_difference 1700 /note="compared to genome" /replace="c" 3'UTR 1950..2143 BASE COUNT 612 a 439 c 458 g 634 t ORIGIN 1 aacatataac attcaagttc ccaacaactt caccgctcat ctccgcacgg ctttcttcat 61 ttagtaatcc ttcgccggat cggatcatcg tttctcagat tcctcttttt aagtttcttc 121 tttcagatgg gtaagtatca ggtcatgaaa cgtgcaagtg aggttgatct ttctactgtc 181 aaatataaag ctgaaaccat gaaagctcct catttgactg gcctttcctt caagttgttc 241 gttaatttgc ttgaagcacc acttataggc tctttgattg ttgattattt gaagaaagac 301 aatggcatga caaagatttt tcgcaacaca gttataccag aagagcccat gtttagaccg 361 gagttcccat ctcaagaacc ggagcatgat gttgtcattg ttggcgaaga tgaaagtcct 421 atagacagat tggaaacagc cttgaaatgt cttcctcagt atgatccttc tcgtagcttg 481 catgcagatc cagtgtcatc tttccggtac tggaagattc gtgattatgc atatgcctat 541 agatctaagc tgacaactcc attgcagtag caaaaagaat aatctcaatc atagaggagt 601 ttggctatga caagcctcca acaccatttt tgattagatt tgatgccaat gaagtcataa 661 agcaagctga agcttctaca cggaggtttg aacaaggaaa tccaatatct gttttggatg 721 gaatatttgt gacaatcaag gacgatattg attgtttacc ccatccgaca aatggtggaa 781 caacatggct gcatgaggat cgttctgtgg agaaggattc agctgttgtt tcaaaactgc 841 gttcttgtgg tgcaatctta cttggcaagg caaatatgca tgagttaggc atggggacca 901 ccgggaacaa ttcaaattac ggaaccacaa gaaacccgca tgatcctaaa aggtacacgg 961 gcggatcttc ctcaggttca gcagctattg tagccgctgg actatgttca gctgctctag 1021 gaacagatgg tggaggttcc gttcgcattc cttcagcact ttgtggtata acgggactga 1081 agacaacata tggtcggaca gatatgacag ggtcattatg tgaaggtgga acagtggaaa 1141 taattggtcc acttgcttca tctctggaag atgccttctt ggtgtatgct gcaatcttgg 1201 gttcttcatc tgctgataga tataatttga aaccgagccc accgtgtttt ccaaagttat 1261 tgtctcacaa cggaagcaat gcaataggat ctctacgact agggaaatat acaaagtggt 1321 ttaatgatgt cagttcaagt gacatctctg acaaatgcga agacatcctt aagctcctat 1381 caaacaatca cggttgcaaa gtggtggaga tagtggttcc tgaactggaa gagatgcgtg 1441 cagcccatgt tatttcgatt gggtctccaa cactgtcttc tcttactccc tactgtgaag 1501 ctgggaaaaa ttcaaaacta agttatgaca ctcgtaccag ctttgcaatt ttccgttcat 1561 tctctgcttc agactatatc gctgctcaat gtcttaggcg aagattgatg gagtatcact 1621 tgaatatctt caaagacgtt gatgtcattg tgacccctac aactggaatg acagctccag 1681 tgatacctcc tgatgctcta aaaaatggag aaaccaatat tcaagtgaca actgatttaa 1741 tgcgcttcgt tctagctgca aatctcctcg gcttccctgc catatcagtc ccggttggtt 1801 atgataaaga ggggcttcct ataggattac aaataatggg aagaccttgg gccgaagcta 1861 ccgtccttgg tttagctgcc gcagtcgagg aactggctcc agttaccaag aaacctgcaa 1921 tcttttatga tattctcaat acaaactgaa ttcataagga tcttccacag aactgaaaag 1981 gcaaggattg tctctggctg cggaatatta tttatgttta cattatataa ggttaatatg 2041 tcaattgatc tacaaatcga cgattattgt gctataaacc gtgttggaat ttcttacgtc 2101 gactatgatt aattttaaaa gatgtgaatt agtcttgagc aag //