LOCUS AW080630 590 bp mRNA linear EST 08-JAN-2011
DEFINITION xc44c07.x1 NCI_CGAP_Co20 Homo sapiens cDNA clone IMAGE:2587116 3'
similar to gb:J03058 ARGININOSUCCINATE LYASE (HUMAN);contains
PTR5.t3 PTR5 repetitive element, mRNA sequence.
ACCESSION AW080630
VERSION AW080630.1
DBLINK BioSample: SAMN00157028
KEYWORDS EST.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 590)
CONSRTM NCI-CGAP http://www.ncbi.nlm.nih.gov/ncicgap
TITLE National Cancer Institute, Cancer Genome Anatomy Project (CGAP),
Tumor Gene Index
JOURNAL Unpublished
COMMENT Contact: Robert Strausberg, Ph.D.
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Christopher A. Moskaluk, M.D., Ph.D., Michael
R. Emmert-Buck, M.D., Ph.D. cDNA Library Preparation: Life
Technologies, Inc. cDNA Library Arrayed by: Christa Prange, The
I.M.A.G.E. Consortium DNA Sequencing by: Washington University
Genome Sequencing Center
Clone distribution: NCI-CGAP clone distribution information can be
found through the I.M.A.G.E. Consortium/LLNL at:
www-bio.llnl.gov/bbrp/image/image.html
Seq primer: -40UP from Gibco
High quality sequence stop: 216.
FEATURES Location/Qualifiers
source 1..590
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2587116"
/tissue_type="moderately differentiated adenocarcinoma"
/clone_lib="SAMN00157028 NCI_CGAP_Co20"
/lab_host="DH10B"
/note="Organ: colon; Vector: pCMV-SPORT6; Site_1: SalI;
Site_2: NotI; Cloned unidirectionally. Primer: Oligo dT.
Normalized to Cot 500. Average insert size 1.11kb.
Normalized version of NCI_CGAP_Co18. Library constructed
by Life Technologies."
BASE COUNT 103 a 176 c 177 g 134 t
ORIGIN
1 tttttttttt tttttttcct ctcgcgccca ctttattagg gggcaggtgt gggaggacct
61 aggcctgctg tgcctgcagt agcgcccgca cctggcggat ctgccagtcg acgctggagc
121 gcgcagtgcc gcccagggca ccatactgct ccacactgtg cccgtagtcc cacacgcaga
181 tcacgtcgcc cgagaacagg gggctgatgg tctgcagctc ctgcagtgac agctggttga
241 gggcgacccc cttggtctcg gccatgaaca caggttttcc cggaggcctc gtgggcctgg
301 cggaatggca tccctttgcg gaccaggtaa taggcaaggt cagtggccag catgtcgggg
361 ctgagagcct gtcccatgtt ctcttggtga atctgcagcg tagagatgac gccagtggcc
421 acctggagca cggcactcat agtgtctgac acttcaaaca cagcttcctt gtcctcctgt
481 aagtctttgt tgtaggtgct gggaagtccc ttgagggtca tcaggagccc ggcacaccgg
541 ccaaacacac gcccaggctt gctccggaca gctccaaact ggcgggtttt
//