LOCUS       AM950288                1365 bp    DNA     linear   MAM 31-JUL-2008
DEFINITION  Sus scrofa partial UBL5 gene for ubiquitin-like protein 5, exons
            2-5.
ACCESSION   AM950288
VERSION     AM950288.1
KEYWORDS    .
SOURCE      Sus scrofa (pig)
  ORGANISM  Sus scrofa
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae;
            Sus.
REFERENCE   1  (bases 1 to 1365)
  AUTHORS   Cepica S.
  JOURNAL   Submitted (01-APR-2008) to the INSDC. Cepica S., Dept. Vertebrate
            Evol. Biol & Genet., Inst. Animal Physiol. & Genet., Rumburska 89,
            Libechov, CZ-277 21, CZECH REPUBLIC.
REFERENCE   2
  AUTHORS   Cepica S., Bartenschlager H., Knoll A., Ovilo C., Masopust M.,
            Vykoukalova Z., Nonneman D., Rohrer G.A., Geldermann H.
  TITLE     Candidate genes (RETN, INSR, CFD, UBL5) for fatness traits on SSC2
            in Meishan crosses: polymorphisms, mapping and association studies
  JOURNAL   Unpublished.
FEATURES             Location/Qualifiers
     source          1..1365
                     /organism="Sus scrofa"
                     /chromosome="2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:9823"
     mRNA            join(<1..60,265..348,509..546,1272..>1365)
                     /gene="UBL5"
     exon            <1..60
                     /gene="UBL5"
                     /number=2
     CDS             join(5..60,265..348,509..546,1272..1315)
                     /gene="UBL5"
                     /product="ubiquitin-like protein 5"
                     /function="reversible modulator of protein function"
                     /db_xref="GOA:B4F450"
                     /db_xref="InterPro:IPR000626"
                     /db_xref="InterPro:IPR029071"
                     /db_xref="InterPro:IPR039732"
                     /db_xref="UniProtKB/TrEMBL:B4F450"
                     /protein_id="CAQ34910.1"
                     /translation="MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVL
                     KKWYTIFKDHVSLGDYEIHDGMNLELYYQ"
     intron          61..264
                     /gene="UBL5"
                     /number=2
     exon            265..348
                     /gene="UBL5"
                     /number=3
     intron          349..508
                     /gene="UBL5"
                     /number=3
     exon            509..546
                     /gene="UBL5"
                     /number=4
     intron          547..1271
                     /gene="UBL5"
                     /number=4
     exon            1272..>1365
                     /gene="UBL5"
                     /number=5
BASE COUNT          328 a          282 c          365 g          390 t
ORIGIN      
        1 caggatgatc gaggttgttt gcaacgaccg tctggggaag aaggtccgcg ttaaatgcaa
       61 gtatcctttg gcggccaaga gacagtggtt tcctgggggt gcttggcttg aggcgggctg
      121 ctcagtctgt gccgtagggt gattctagtt aaacctggga ggcggggacg ggagtgggat
      181 cctggcagag tgcattcggt cctggaatgc cctcttcctc gttctatctc ccccttccat
      241 tttccttaac tccttcgtgc ccagtacgga tgacaccatc ggggacctta agaagctgat
      301 cgcagcccaa actggcaccc gttggaacaa gatcgtattg aagaagtggt gagtacagtg
      361 gtggagatgg gagctggaaa ggagctggcc agagactttg ggtgggtgag tgctgcagcc
      421 agccctttgc tcaggcagaa ctcctcagca tgcctccaga atgaagagcc tttttaaagt
      481 ttttttctga aaacttttta tcccttaggt acacgatttt taaggaccac gtgtctctgg
      541 gggactgtat cctttgtgat ttcttgagga agggttttca tacccaggct tggttctcct
      601 tgttctatat atagactgga gtctatatga gattatgcac ataatgtatt taacttagta
      661 tgtggtacat ggtgtttaga aaatgggagc catgtgatta ttttgttggg gcaggagggt
      721 ggttggtgaa gtattttgac atggcttcta agactttgac actttggagt tcccatcatg
      781 gctcagcagt aacgaacctg actggtatcc atgaagacac gggtttgatc cctggcctcg
      841 ctgagtgggt taaggatcca gtattttgcc ctgagttgtg gtgtaggtca cagacgaggt
      901 cagattttga gttgctattg ctgtggctat ggcataagcc agcagttgca gctctgattc
      961 gacccctagc ctgggaactt ccatatgctg caagtatggc cctaaaaggc aaaaaaaaaa
     1021 aaaaaaaaaa agagggtttg cagtcaaaat atttattact gagttccacc ttagttgggc
     1081 aggaagtcac ggtggagtaa gactcaggct tatgtgttgt acaagaggat catgtacttt
     1141 ttatttaaaa gtttggattc ttttcaaatc aaaatgacct agtccaaaaa tgtggctacc
     1201 agctgtgaga gatgggaggg gtgggggggg ttcaacccca ccctgatgat tccttgactc
     1261 atttactaca gatgaaatcc atgatgggat gaacctggag ctttattacc aataaagcag
     1321 aattccttcc ccccctacct tgcccttctc tcttctccta ccctc
//