LOCUS AM087411 2841 bp DNA linear BCT 24-FEB-2006 DEFINITION Pseudomonas aeruginosa class 1 integron containing blaVIM-4, aacA7, aadA6 and orfD gene cassettes. ACCESSION AM087411 VERSION AM087411.1 KEYWORDS aacA7 gene; aacA7 gene cassette; aadA6 gene; aadA6 gene cassette; aminoglycoside-modifying enzyme; blaVIM-4 gene; blaVIM-4 gene cassette; metallo-beta-lactamase; ORFD. SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 2841) AUTHORS Gniadkowski M.T. JOURNAL Submitted (22-SEP-2005) to the INSDC. Gniadkowski M.T., Molecular Microbiology, National Institute of Public Health, Chelmska Street 30/34, 00-725 Warsaw, POLAND. REFERENCE 2 AUTHORS Fiett J., Baraniak A., Mrowka A., Fleischer M., Drulis-Kawa Z., Naumiuk L., Samet A., Hryniewicz W., Gniadkowski M. TITLE Molecular epidemiology of acquired-metallo-beta-lactamase-producing bacteria in Poland JOURNAL Antimicrob. Agents Chemother. 50(3), 880-886(2006). PUBMED 16495246 FEATURES Location/Qualifiers source 1..2841 /organism="Pseudomonas aeruginosa" /isolate="NIPH2611/04" /mol_type="genomic DNA" /geo_loc_name="Poland:Upper Silesia" /isolation_source="hospitalised patient" /db_xref="taxon:287" mobile_element <1..>103 /mobile_element_type="transposon:class 1 integron" misc_recomb 97..103 /note="core site" misc_feature 98..937 /note="blaVIM-4 gene cassette" CDS 128..928 /transl_table=11 /gene="blaVIM-4" /product="metallo-beta-lactamase" /function="resistance to antimicrobials" /db_xref="GOA:Q8KRJ3" /db_xref="InterPro:IPR001279" /db_xref="InterPro:IPR036866" /db_xref="PDB:2WHG" /db_xref="UniProtKB/TrEMBL:Q8KRJ3" /protein_id="CAJ32502.1" /translation="MLKVISSLLVYMTASVMAVASPLAHSGEPSGEYPTVNEIPVGEV RLYQIADGVWSHIATQSFDGAVYPSNGLIVRDGDELLLIDTAWGAKNTAALLAEIEKQ IGLPVTRAVSTHFHDDRVGGVDVLRAAGVATYASPSTRRLAEAEGNEIPTHSLEGLSS SGDAVRFGPVELFYPGAAHSTDNLVVYVPSANVLYGGCAVHELSRTSAGNVADADLAE WPTSVERIQKHYPEAEVVIPGHGLPGGLDLLQHTANVVKAHKNRSVAE" misc_recomb complement(937..943) /note="inverse core site" misc_recomb 1011..1017 /note="core site" misc_feature 1012..1497 /note="aacA7 gene cassette" CDS 1022..1480 /transl_table=11 /gene="aacA7" /product="aminoglycoside-modifying enzyme" /function="resistance to antimicrobials" /db_xref="GOA:Q7BL22" /db_xref="InterPro:IPR000182" /db_xref="InterPro:IPR016181" /db_xref="InterPro:IPR024170" /db_xref="UniProtKB/TrEMBL:Q7BL22" /protein_id="CAJ32503.1" /translation="MDSSPLVRPVETTDSASWLSMRCELWPDGTCQEHQSEIAEFLSG KVARPAAVLIAVAPDGEALGFAELSIRPYAEECYSGNVAFLEGWYVVPSARRQGVGVA LVKAAEHWARGRGCTEFASDTQLTNSASTSAHLAAGFTEVAQVRCFRKPL" misc_recomb complement(1497..1503) /note="inverse core site" misc_recomb 1602..1608 /note="core site" misc_feature 1603..>2457 /note="aadA6 gene cassette" CDS 1612..2457 /transl_table=11 /gene="aadA6" /product="aminoglycoside-modifying enzyme" /function="resistance to antimicrobials" /db_xref="GOA:Q9RGC2" /db_xref="InterPro:IPR002934" /db_xref="InterPro:IPR024172" /db_xref="InterPro:IPR025184" /db_xref="UniProtKB/TrEMBL:Q9RGC2" /protein_id="CAJ32504.1" /translation="MSNAVPAEISVQLSLALNAIERHLESTLLAVHLYGSALDGGLKP YSDIDLLVTVAARLDETVRQALVVDLLEISASPGQSEALRALEVTIVVHGDVVPWRYP ARRELQFGEWQRKDILAGIFEPATTDVDLAILLTKVRQHSLALAGSAAEDFFNPVPEG DLFKALSDTLKLWNSQPDWEGDERNVVLTLSRIWYSAATGKIAPKDIVANWAMERLPD QHKPVLLEARQAYLGQGEDCLASRADQLAAFVHFVKHEATKLLSAMPVMSNNSFKPTP LRGAA" CDS 2475..2777 /transl_table=11 /product="hypothetical protein" /note="ORFD" /db_xref="GOA:Q9RGC1" /db_xref="InterPro:IPR010416" /db_xref="UniProtKB/TrEMBL:Q9RGC1" /protein_id="CAJ32505.1" /translation="MKPSFISPMFIQTAFSFSNAVQRWVCRFSGLRLVALRWFVVFLA SGPCVASASSYFFRSAVPPRWHRAFSQLAPVAKLRLSVLASGSNISVKPTRILRSA" BASE COUNT 590 a 766 c 802 g 683 t ORIGIN 1 ggcatccaag cagcaagcgc gttacgccgt gggtcgatgt ttgatgttat ggagcagcaa 61 cgatgttacg cagcagggca gtcgccctaa aacaaagtta tgccgcaccc acccctatgg 121 agtcttgatg ttaaaagtta ttagtagttt attggtctac atgaccgcgt ctgtcatggc 181 tgtcgcaagt ccgttagccc attccgggga gccgagtggt gagtatccga cagtcaacga 241 aattccggtc ggagaggtcc gactttacca gattgccgat ggtgtttggt cgcatatcgc 301 aacgcagtcg tttgatggcg cggtctaccc gtccaatggt ctcattgtcc gtgatggtga 361 tgagttgctt ttgattgata cagcgtgggg tgcgaaaaac acagcggcac ttctcgcgga 421 gattgaaaag caaattggac ttcccgtaac gcgtgcagtc tccacgcact ttcatgacga 481 ccgcgtcggc ggcgttgatg tccttcgggc ggctggggtg gcaacgtacg catcaccgtc 541 gacacgccgg ctagccgagg cagaggggaa cgagattccc acgcattctc tagaaggact 601 ctcatcgagc ggggacgcag tgcgcttcgg tccagtagag ctcttctatc ctggtgctgc 661 gcattcgacc gacaatctgg ttgtatacgt cccgtcagcg aacgtgctat acggtggttg 721 tgccgttcat gagttgtcac gcacgtctgc ggggaacgtg gccgatgccg atctggctga 781 atggcccacc tccgttgagc ggattcaaaa acactacccg gaagcagagg tcgtcattcc 841 cgggcacggt ctaccgggcg gtctagactt gctccagcac acagcgaacg ttgtcaaagc 901 acacaaaaat cgctcagtcg ccgagtagca gatgcggcat aacaaatcgt tggagcggga 961 cttttgctac gcaggctgcg cctactccgc aaaagcccct caactcaggc gttaggcacc 1021 aatggatagt tcgccgctcg tcaggcctgt tgaaactacc gattcggcca gttggctaag 1081 catgcgctgt gagctgtggc cagatggcac atgtcaagag caccagtcag agatcgcaga 1141 atttctgtcc ggaaaagtcg cccggcctgc tgctgtcctc attgctgtag cacccgacgg 1201 agaagcacta gggtttgccg agctttcgat ccgcccgtat gcggaggagt gctactccgg 1261 caacgttgcg ttcttggagg gttggtacgt tgtgccaagt gcgcggcgtc agggcgtagg 1321 tgtagctctg gtaaaagccg ccgagcattg ggctcgtggt cgcggatgca ccgaattcgc 1381 ctccgacact caacttacca acagcgcaag cacctcggcg cacctggcgg ctggattcac 1441 ggaggttgct caagtacgct gcttccggaa accgttgtga ggggcgccgc gttggtgcct 1501 aacaattcgt tcaagccgaa cttgcttcgt tacaccaaag ccatggcaga aagagcttgc 1561 catggctttg gctccactac gcaagtcggc ttaactcagg cgttagacat catgagtaac 1621 gcagtacccg ccgagatttc ggtacagcta tcactggctc tcaacgccat cgagcgtcat 1681 ctggaatcaa cgttgctggc cgtgcatttg tacggctctg cactggacgg tggcctgaag 1741 ccatacagtg atattgattt gctggttact gtggctgcac ggctcgatga gactgtccga 1801 caagccctgg tcgtagatct cttggaaatt tctgcctccc ctggccaaag tgaagctctc 1861 cgcgccttgg aagttaccat cgtcgtgcat ggtgatgttg tcccttggcg ttatccggcc 1921 agacgggaac tgcaattcgg ggagtggcag cgtaaggaca ttcttgcggg catcttcgag 1981 cccgccacaa ccgatgttga tctggctatt ctgctaacta aagtaaggca gcatagcctt 2041 gcattggcag gttcggccgc agaggatttc tttaacccag ttccggaagg cgatctattc 2101 aaggcattga gcgacactct gaaactatgg aattcgcagc cggattggga aggcgatgag 2161 cggaatgtag tgcttacctt gtctcgcatt tggtacagcg cagcaaccgg caagatcgca 2221 ccgaaggata tcgttgccaa ctgggcaatg gagcgtctgc cagatcaaca taagcccgta 2281 ctgcttgaag cccggcaggc ttatcttgga caaggagaag attgcttggc ctcacgcgcg 2341 gatcagttgg cggcgttcgt tcacttcgtg aaacatgaag ccactaaatt gcttagtgcc 2401 atgccagtga tgtctaacaa ttcattcaag ccgacgccgc ttcgcggcgc ggcttaattc 2461 aggcgttagt accactgaaa ccctccttta tttcgcccat gtttattcaa acggcattca 2521 gtttctcaaa cgctgtgcag cgctgggttt gccgtttctc tgggcttcgc ctggtggcgt 2581 tacgctggtt tgtggtcttt ttggcctctg gcccttgtgt agcaagcgcg agcagctatt 2641 tttttcgtag tgctgtgccg cctcggtggc accgtgcctt ttcgcagtta gcgcccgtcg 2701 ccaagttacg gttatccgtt ttggcttctg gctctaacat ttcggtcaag ccgacccgca 2761 ttctgcggtc ggcttaactc gcccgttaga tgcactaagc acataattgc tcacagccaa 2821 actatcaggt caagtctgct t //