LOCUS       AK317403                1158 bp    mRNA    linear   PLN 21-APR-2009
DEFINITION  Arabidopsis thaliana AT4G00355 mRNA, complete cds, clone:
            RAFL25-26-J15.
ACCESSION   AK317403
VERSION     AK317403.1
KEYWORDS    FLI_CDNA; CAP trapper.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 1158)
  AUTHORS   Fukami-Kobayashi,K., Iida,K., Kobayashi,M., Seki,M., Ishida,J.,
            Nakajima,M., Kawashima,M., Morosawa,T., Toyoda,A., Sakaki,Y.,
            Carninci,P., Kawai,J., Hayashizaki,Y. and Shinozaki,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2008)
            Contact:Kaoru Fukami-Kobayashi
            RIKEN, BioResource Center; 3-1-1 Koyadai, Tsukuba, Ibaraki
            305-0074, Japan
            URL    :http://www.brc.riken.jp/
REFERENCE   2  
  AUTHORS   Iida,K., Fukami-Kobayashi,K., Toyoda,A., Sakaki,Y., Kobayashi,M.,
            Seki,M. and Shinozaki,K.
  TITLE     Analysis of multiple occurrences of alternative splicing events in
            Arabidopsis thaliana using novel sequenced full-length cDNAs.
  JOURNAL   DNA Res. (2009) In press
COMMENT     An Arabidopsis full-length cDNA library was constructed
            essentially as reported previously. (Seki et al. (1998) Plant J.
            15:707-720; Seki et al. (2002) Science 296:141-145)
            
            This clone is in a modified pBluescript vector.
            
            Please visit our web site (http://rarge.gsc.riken.jp/) for further
            details.
FEATURES             Location/Qualifiers
     source          1..1158
                     /chromosome="4"
                     /clone="RAFL25-26-J15"
                     /db_xref="taxon:3702"
                     /ecotype="Columbia"
                     /mol_type="mRNA"
                     /note="clone_lib: RAFL25"
                     /note="treated with various stress (heat and UV), hormone
                     (ABA, auxin, ethylene, JA, SA, GA, and cytokinin), and
                     BTH treatments"
                     /organism="Arabidopsis thaliana"
                     /tissue_type="rosette leaf"
     CDS             150..950
                     /codon_start=1
                     /gene="AT4G00355"
                     /note="alternative splicing: AT4G00355.1"
                     /protein_id="BAH20073.1"
                     /transl_table=1
                     /translation="MADKDEAATRGNDWEVVSLTASAYAAAPGPKPVVDSKDDDHKEV
                     TPCYEAGTSHPLYMSRHFVFPPTGQLENTSDLTEASLTGSHCKEGSDLSLKGLDLSDD
                     FGGLEFSEDKGKKEENIYTTAMSSLDDERAIGGSHVYEPVEEPTEPVSPSDVTLDLNP
                     IKDDEVANSPPSEEAWWKRSVASLIAQAKETNTVWSICIAAAVMGIVILGQHWQQERW
                     QILQQKWESSIGNEKAGRLMGPISRLKQAFVGGQRRDSFIRASAQNDR"
BASE COUNT          325 a          239 c          266 g          328 t
ORIGIN      
        1 ggtttttggt tgcaatcgtc tcatcacaat cacatcatca tcgtcttcgt cttcttcttc
       61 gtcggcacat actttgtctt ctcatctcct ccattatttt gatcttatcg caacagatct
      121 ctcatttcct tcacttgttg actgtgacaa tggctgacaa agatgaagca gcgacgcgtg
      181 gaaatgattg ggaagttgtt tctcttactg cttcagctta cgctgctgct cctggtccta
      241 aaccagtagt ggactcgaaa gatgatgatc acaaggaagt tactccttgt tacgaagctg
      301 ggacatctca tcccttatac atgtctcgcc actttgtttt cccaccaact ggtcagcttg
      361 agaatactag tgaccttacc gaggctagct taacggggtc tcattgcaag gaagggagtg
      421 atttgagtct gaaagggttg gatttatcag atgatttcgg aggacttgag ttttccgagg
      481 ataaaggcaa gaaagaagaa aacatttaca cgacagctat gagttctctg gacgatgaaa
      541 gagctatcgg tggctcacac gtgtatgaac ctgttgaaga accgaccgag cctgtttctc
      601 cttctgatgt tacacttgat ctgaatccta ttaaagatga tgaggtagca aactcgccac
      661 ctagcgaaga agcttggtgg aaaagaagcg ttgcctcttt gattgcccaa gcgaaagaaa
      721 ctaatacagt ttggtccatc tgcatagccg cagctgtaat gggaattgtg attcttggcc
      781 aacattggca acaggagagg tggcagattt tgcagcaaaa gtgggaatca agcattggaa
      841 acgagaaagc tggaagattg atggggccaa tctctcgact aaaacaagca tttgtcgggg
      901 gacagcggcg ggattcattc atccgagcca gcgcccaaaa cgaccgttaa atcaaaacaa
      961 aaaggtgaat tactttgatg atgacgataa gaacaagagt agcttctttg gggtcgaaaa
     1021 acatggatgt ctggtgtgtg aatgtgtttg gtacttctct tcaggtcatg gtttttgtac
     1081 atatttcttt ggtgtgaaac aatcatttac ccatttcatt atctcaatgc cctattactc
     1141 ccaaaaaaaa aaaaaaaa
//