LOCUS AK296586 2292 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ59562 complete cds, highly similar to Cartilage oligomeric matrix protein precursor. ACCESSION AK296586 VERSION AK296586.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2292) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..2292 /cell_type="chondrocytes" /clone="CHONS2000505" /db_xref="H-InvDB:HIT000491210" /db_xref="taxon:9606" /mol_type="mRNA" /note="clone_lib: CHONS2" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" CDS 37..2151 /codon_start=1 /note="highly similar to Cartilage oligomeric matrix protein precursor" /protein_id="BAG59205.1" /transl_table=1 /translation="MVPDTACVLLLTLAALGASGQGQSPLGSDLGPQMLRELQETNAA LQDVRELLRQQVREITFLKNTVMECDACGMQQSVRTGLPSVRPLLHCAPGFCFPGVAC IQTESGARCGPCPAGFTGNGSHCTDVNECETGQHNCVPNSVCINTRGSFQCGPCQPGF VGDQASGCQRRAQRFCPDGSPSECHEHADCVLERDGSRSCVCAVGWAGNGILCGRDTD LDGFPDEKLRCPERQCRKDNCVTVPNSGQEDVDRDGIGDACDPDADGDGVPNEKDNCP LVRNPDQRNTDEDKWGDACDNCRSQKNDDQKDTDQDGRGDACDDDIDGDRIRNQADNC PRVPNSDQKDSDGDGIGDACDNCPQKSNPDQADVDHDFVGDACDSDQDQDGDGHQDSR DNCPTVPNSAQEDSDHDGQGDACDDDDDNDGVPDSRDNCRLVPNPGQEDADRDGVGDV CQDDFDADKVVDKIDVCPENAEVTLTDFRAFQTVVLDPEGDAQIDPNWVVLNQGREIV QTMNSDPGLAVGYTAFNGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVMWKQMEQ TYWQANPFRAVAEPGIQLKAVKSSTGPGEQLRNALWHTGDTESQVRLLWKDPRNVGWK DKKSYRWFLQHRPQVGYIRVRFYEGPELVADSNVVLDTTMRGGRLGVFCFSQENIIWA NLRYRCNDTIPEDYETHQLRQA" BASE COUNT 481 a 700 c 765 g 346 t ORIGIN 1 agaaagcgag cagccaccca gctccccgcc accgccatgg tccccgacac cgcctgcgtt 61 cttctgctca ccctggctgc cctcggcgcg tccggacagg gccagagccc gttgggctca 121 gacctgggcc cgcagatgct tcgggaactg caggaaacca acgcggcgct gcaggacgtg 181 cgggagctgc tgcggcagca ggtcagggag atcacgttcc tgaaaaacac ggtgatggag 241 tgtgacgcgt gcgggatgca gcagtcagta cgcaccggcc tacccagcgt gcggcccctg 301 ctccactgcg cgcccggctt ctgcttcccc ggcgtggcct gcatccagac ggagagcggc 361 gcgcgctgcg gcccctgccc cgcgggcttc acgggcaacg gctcgcactg caccgacgtc 421 aacgagtgtg agaccgggca acataactgc gtccccaact ccgtgtgcat caacacccgg 481 ggctccttcc agtgcggccc gtgccagccc ggcttcgtgg gcgaccaggc gtccggctgc 541 cagcggcgcg cacagcgctt ctgccccgac ggctcgccca gcgagtgcca cgagcatgca 601 gactgcgtcc tagagcgcga tggctcgcgg tcgtgcgtgt gtgccgttgg ctgggccggc 661 aacgggatcc tctgtggtcg cgacactgac ctagacggct tcccggacga gaagctgcgc 721 tgcccggagc gccagtgccg taaggacaac tgcgtgactg tgcccaactc agggcaggag 781 gatgtggacc gcgatggcat cggagacgcc tgcgatccgg atgccgacgg ggacggggtc 841 cccaatgaaa aggacaactg cccgctggtg cggaacccag accagcgcaa cacggacgag 901 gacaagtggg gcgatgcgtg cgacaactgc cggtcccaga agaacgacga ccaaaaggac 961 acagaccagg acggccgggg cgatgcgtgc gacgacgaca tcgacggcga ccggatccgc 1021 aaccaggccg acaactgccc tagggtaccc aactcagacc agaaggacag tgatggcgat 1081 ggtatagggg atgcctgtga caactgtccc cagaagagca acccggatca ggcggatgtg 1141 gaccacgact ttgtgggaga tgcttgtgac agcgatcaag accaggatgg agacggacat 1201 caggactctc gggacaactg tcccacggtg cctaacagtg cccaggagga ctcagaccac 1261 gatggccagg gtgatgcctg cgacgacgac gacgacaatg acggagtccc tgacagtcgg 1321 gacaactgcc gcctggtgcc taaccccggc caggaggacg cggacaggga cggcgtgggc 1381 gacgtgtgcc aggacgactt tgatgcagac aaggtggtag acaagatcga cgtgtgtccg 1441 gagaacgctg aagtcacgct caccgacttc agggccttcc agacagtcgt gctggacccg 1501 gagggtgacg cgcagattga ccccaactgg gtggtgctca accagggaag agagatcgtg 1561 cagacaatga acagcgaccc aggcctggct gtgggttaca ctgccttcaa tggcgtggac 1621 ttcgagggca cgttccatgt gaacacggtc acggatgacg actatgcggg cttcatcttt 1681 ggctaccagg acagctccag cttctacgtg gtcatgtgga agcagatgga gcaaacgtat 1741 tggcaggcga accccttccg tgctgtggcc gagcctggca tccaactcaa ggctgtgaag 1801 tcttccacag gccccgggga acagctgcgg aacgctctgt ggcatacagg agacacagag 1861 tcccaggtgc ggctgctgtg gaaggacccg cgaaacgtgg gttggaagga caagaagtcc 1921 tatcgttggt tcctgcagca ccggccccaa gtgggctaca tcagggtgcg attctatgag 1981 ggccctgagc tggtggccga cagcaacgtg gtcttggaca caaccatgcg gggtggccgc 2041 ctgggggtct tctgcttctc ccaggagaac atcatctggg ccaacctgcg ttaccgctgc 2101 aatgacacca tcccagagga ctatgagacc catcagctgc ggcaagccta gggaccaggg 2161 tgaggacccg ccggatgaca gccaccctca ccgcggctgg atgggggctc tgcacccagc 2221 cccaaggggt ggccgtcctg agggggaagt gagaagggct cagagaggac aaaataaagt 2281 gtgtgtgcag gg //