LOCUS AK228418 4141 bp mRNA linear PLN 27-JUL-2006 DEFINITION Arabidopsis thaliana mRNA for cytochrome b245 beta chain homolog RbohAp108, complete cds, clone: RAFL14-95-K20. ACCESSION AK228418 VERSION AK228418.1 KEYWORDS FLI_CDNA; CAP trapper. SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 4141) AUTHORS Totoki,Y., Seki,M., Ishida,J., Nakajima,M., Enju,A., Morosawa,T., Kamiya,A., Narusaka,M., Shin-i,T., Nakagawa,M., Sakamoto,N., Oishi,K., Kohara,Y., Kobayashi,M., Toyoda,A., Sakaki,Y., Sakurai,T., Iida,K., Akiyama,K., Satou,M., Toyoda,T., Konagaya,A., Carninci,P., Kawai,J., Hayashizaki,Y. and Shinozaki,K. TITLE Direct Submission JOURNAL Submitted (26-JUL-2006) to the DDBJ/EMBL/GenBank databases. Contact:Motoaki Seki RIKEN Plant Science Center; 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan URL :http://rarge.gsc.riken.jp/ REFERENCE 2 AUTHORS Totoki,Y., Seki,M., Ishida,J., Nakajima,M., Enju,A., Morosawa,T., Kamiya,A., Narusaka,M., Shin-i,T., Nakagawa,M., Sakamoto,N., Oishi,K., Kohara,Y., Kobayashi,M., Toyoda,A., Sakaki,Y., Sakurai,T., Iida,K., Akiyama,K., Satou,M., Toyoda,T., Konagaya,A., Carninci,P., Kawai,J., Hayashizaki,Y. and Shinozaki,K. TITLE Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs JOURNAL Unpublished (2007) COMMENT An Arabidopsis full-length cDNA library was constructed essentially as reported previously (Seki et al. (1998) Plant J. 15:707-720; Seki et al. (2002) Science 296:141-145). This clone is in a modified pBluescript vector. Please visit our web site (http://rarge.gsc.riken.jp/) for further details. FEATURES Location/Qualifiers source 1..4141 /chromosome="1" /clone="RAFL14-95-K20" /db_xref="taxon:3702" /ecotype="Columbia" /mol_type="mRNA" /note="common name: thale cress" /organism="Arabidopsis thaliana" misc_difference 3 /note="compared to genomic sequence" /replace="t" CDS 238..1716 /codon_start=1 /gene="At1g64060" /product="cytochrome b245 beta chain homolog RbohAp108" /protein_id="BAF00352.1" /translation="MKPFSKNDRRRWSFDSVSAGKTAVGSASTSPGTEYSINGDQEFV EVTIDLQDDDTIVLRSVEPATAINVIGDISDDNTGIMTPVSISRSPTMKRTSSNRFRQ FSQELKAEAVAKAKQLSQELKRFSWSRSFSGNLTTTSTAANQSGGAGGGLVNSALEAR ALRKQRAQLDRTRSSAQRALRGLRFISNKQKNVDGWNDVQSNFEKFEKNGYIYRSDFA QCIGMKDSKEFALELFDALSRRRRLKVEKINHDELYEYWSQINDESFDSRLQIFFDIV DKNEDGRITEEEVKEIIMLSASANKLSRLKEQAEEYAALIMEELDPERLGYIELWQLE TLLLQKDTYLNYSQALSYTSQALSQNLQGLRGKSRIHRMSSDFVYIMQENWKRIWVLS LWIMIMIGLFLWKFFQYKQKDAFHVMGYCLLTAKGAAETLKFNMALILFPVCRNTITW LRSTRLSYFVPFDDNINFHKKSKPILIRDTKSSSNAMCCQKS" misc_difference 1811 /note="compared to genomic sequence" /replace="" misc_difference 3264 /note="compared to genomic sequence" /replace="g" misc_difference 3894^3895 /note="compared to genomic sequence" /replace="ga" misc_difference 4062 /note="compared to genomic sequence" /replace="a" BASE COUNT 1278 a 769 c 814 g 1280 t ORIGIN 1 gtggatctct ctctctccgt caacgttctc tctataaagc agagagtttc acagcgcgtg 61 aaaaatggct tttcccactt agccacaacg acgcgtttca attctccatc tctccctctc 121 tctctctctt tcttcaaaga ttccaccaac ctatacatat acttatatat aatctatgct 181 acgtgtatat acttccgata tccttcaacc aactctttga attccgactt tggatctatg 241 aaaccgttct caaagaacga tcggcgacgg tggtcatttg attcagtttc cgccggaaaa 301 accgccgtcg gaagtgcatc aacttcaccg ggaactgaat actccattaa cggtgatcaa 361 gagttcgttg aagtcacaat cgatcttcaa gacgatgaca caatcgttct tcgtagcgtc 421 gagccagcaa ccgccattaa tgtcatcgga gatatctccg acgacaacac cggaataatg 481 actccggttt cgatttcgag atctccgacg atgaaacgaa cttcatctaa tcggttccga 541 caattctcac aagagcttaa agccgaagct gtggcgaaag cgaaacagtt atctcaggag 601 ttgaaacgat tctcatggtc tcgttctttc tcaggtaact taaccactac tagtaccgcc 661 gctaatcaaa gcggcggtgc tggtggtggt ttggtgaact cggctttaga agcgcgagcg 721 ttgcgaaagc aacgtgctca gttagatcgg actcggtcta gtgctcaaag agctcttcgt 781 ggtttgagat tcattagcaa taagcaaaag aacgttgatg gttggaacga tgttcaatca 841 aatttcgaaa aattcgaaaa aaatggttac atctatcgct ccgatttcgc tcaatgcata 901 ggaatgaaag attcgaaaga atttgcattg gaactgttcg atgcattgag tagaagaaga 961 agattaaaag tagagaaaat caatcacgat gagctttatg agtattggtc acaaatcaac 1021 gacgagagtt ttgattctcg tctccagatc ttcttcgaca tagtggacaa gaatgaagat 1081 gggagaatta cagaagagga agtaaaagag ataataatgt tgagtgcatc tgcaaataag 1141 ctatcaagat taaaggaaca agcagaggaa tatgcagctt tgattatgga agagttagat 1201 cctgaaagac ttggctacat agagctatgg caactagaga ctttgcttct acaaaaagac 1261 acatacctca attacagtca agcattgagc tatacgagcc aagcattgag ccaaaacctt 1321 caagggttaa ggggaaagag tcgaatacat agaatgagtt cggatttcgt ctacattatg 1381 caagagaatt ggaaaaggat atgggtttta tccttatgga tcatgatcat gatcggatta 1441 ttcttgtgga aattcttcca atacaagcaa aaagatgcat ttcatgtgat gggatattgt 1501 ttactcacag ccaaaggagc agctgaaaca cttaaattca acatggctct aatacttttc 1561 ccagtttgca gaaacaccat tacttggctt agatccacaa gactctctta cttcgttcct 1621 tttgatgata atatcaactt ccacaagaag tcaaaaccaa tactaattag agatacaaaa 1681 tcctcatcga acgcaatgtg ctgtcaaaaa agctgagatt gttgtggggc tcatattctt 1741 tgtgcacgca ctggaacatt gacatgacag ctaaacagct atttcgcttt ctcttttttt 1801 tttttttttt tggttctctc tttctcattt cttacatttt tttgccacta aagaaaagtg 1861 aataagatta aggcatgtgg aatttaggtt tggttaggaa agtcttatac ggaattagag 1921 ctgaactttt aattcagttt gaaatttttt gtctctatgt tgcaaaaaaa acaacttcat 1981 atacagctgt tttgaataaa attttgaaaa gctataccga attaaaatca attttttttg 2041 tttagttcga ataaaattag tctggttttc ttatatggtt tggttcggtt ttgcaccaaa 2101 gataacttca catgcaaatt tttattttct aattcagtta agtacattac atatagtaag 2161 attggttttg gtatatttaa ataacaaatt aaatttttca ttagttgcag tttatttggt 2221 ttgctttggt tgtataagct tggtttcagt aaataaacta agattaattt tggtttggtc 2281 ttggttttgg ttttagaaat gctcaccttt aaaagtgaag gttgtgttgt agtggggaaa 2341 aaattcttat ttgatcattt taaactttca taaagtaaga aaccaatgct ctactcacta 2401 aactattttg atagaaaatt ttaactcact gctctttttt ttggtttttt tgttatgtgc 2461 agacaattgc tggagccatt gtagtagctg tgatccttca tattggagac catcttgctt 2521 gtgatttccc tagaattgtt agagccaccg aatacgatta caatcggtat ctgtttcatt 2581 actttcaaac aaaacagcca acatacttcg acctcgttaa gggacctgaa ggaatcactg 2641 ggattttaat ggtcattttg atgattattt cattcacatt agcaacaaga tggtttaggc 2701 gtaacctagt caagcttcct aagccatttg atcgactaac cggttttaac gccttttggt 2761 attcgcatca tttgttcgtc attgtttata tcttgcttat tcttcatggt atcttcctct 2821 atttcgccaa gccttggtat gttcgtacga catggatgta tcttgcagta ccagttttac 2881 tctatggtgg agaaagaaca cttaggtact tccgttctgg ttcttattcg gttcgactgc 2941 ttaaggttgc tatatatcct ggtaatgttc taacgctaca aatgtcgaaa ccaactcaat 3001 ttcgttacaa aagcggacaa tacatgtttg tccaatgtcc tgcggtttcg ccattcgagt 3061 ggcatccatt ctcaattact tccgcacctg aagatgatta tatcagcatt cacattagac 3121 aacttggtga ttggactcaa gaactcaaaa gagtattctc tgaagtttgt gagccaccgg 3181 ttggcggtaa aagcggactt ctcagagccg acgaaacaac aaagaaaagt ttgccaaagc 3241 tattgataga tggaccgtac ggtacaccag cacaagatta taggaaatat gatgttctct 3301 tattagttgg tcttggcatt ggtgcaactc catttatcag tatcttgaaa gatttgctta 3361 acaacattgt taaaatggaa gagcatgcgg attcgatctc ggatttcagt agatcatcag 3421 aatacagcac aggaagcaac ggtgacacgc caagacgaaa gagaatacta aaaaccacaa 3481 atgcttattt ctactgggtc acaagagaac aaggctcttt tgattggttc aaaggtgtca 3541 tgaacgaagt tgcagaactt gaccaacggg gtgtgataga gatgcataac tatttaacaa 3601 gtgtgtatga agaaggtgat gctcgttctg ctctcattac aatggttcaa gctcttaatc 3661 atgccaaaaa tggtgtcgac attgtctctg gcactagggt cagaacacac tttgcaagac 3721 ctaattggaa gaaggttctc acaaagctaa gttccaagca ttgcaatgca agaataggag 3781 tgttttattg cggagtaccg gttttaggga aggagcttag caaactatgc aacacattca 3841 atcaaaaagg ttcaaccaag tttgaatttc acaaggagca tttctaaaag acaaaggaag 3901 aagccaaaag ccctctagat tctttaatat ctcaaattta gccacttata gtataaaggc 3961 aatctcttca ctatttaatt caaagtgatt aaacgttaac acactgtcaa aagtgagtgt 4021 gttaacgttt agctccacac gttctaggtt tatatacacc ggggcatacg tgtaaatata 4081 cgagacagaa gaaattcaag ggggtttgat agaagcatat agtaaaattt taataaaaaa 4141 a //