LOCUS AK158195 2267 bp mRNA linear HTC 06-OCT-2010 DEFINITION Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930041A15 product:natriuretic peptide receptor 2, full insert sequence. ACCESSION AK158195 VERSION AK158195.1 KEYWORDS HTC_FLI; HTC; CAP trapper. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 2267) AUTHORS Arakawa,T., Carninci,P., Fukuda,S., Hashizume,W., Hayashida,K., Hori,F., Iida,J., Imamura,K., Imotani,K., Itoh,M., Kanagawa,S., Kawai,J., Kojima,M., Konno,H., Murata,M., Nakamura,M., Ninomiya,N., Nishiyori,H., Nomura,K., Ohno,M., Sakazume,N., Sano,H., Sasaki,D., Shibata,K., Shiraki,T., Tagami,M., Tagami,Y., Waki,K., Watahiki,A., Muramatsu,M. and Hayashizaki,Y. TITLE Direct Submission JOURNAL Submitted (30-MAR-2004) to the DDBJ/EMBL/GenBank databases. Contact:Yoshihide Hayashizaki The Institute of Physical and Chemical Research (RIKEN), Omics Science Center, RIKEN Yokohama Institute; 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan URL :http://www.osc.riken.jp/ REFERENCE 2 AUTHORS CONSRTM The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) TITLE The Transcriptional Landscape of the Mammalian Genome JOURNAL Science 309, 1559-1563 (2005) REFERENCE 3 AUTHORS CONSRTM RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium TITLE Antisense Transcription in the Mammalian Transcriptome JOURNAL Science 309, 1564-1566 (2005) REFERENCE 4 AUTHORS CONSRTM The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team TITLE Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs JOURNAL Nature 420, 563-573 (2002) REFERENCE 5 AUTHORS CONSRTM The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium TITLE Functional annotation of a full-length mouse cDNA collection JOURNAL Nature 409, 685-690 (2001) REFERENCE 6 AUTHORS Carninci,P. and Hayashizaki,Y. TITLE High-efficiency full-length cDNA cloning JOURNAL Meth. Enzymol. 303, 19-44 (1999) REFERENCE 7 AUTHORS Carninci,P., Shibata,Y., Hayatsu,N., Sugahara,Y., Shibata,K., Itoh,M., Konno,H., Okazaki,Y., Muramatsu,M. and Hayashizaki,Y. TITLE Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes JOURNAL Genome Res. 10, 1617-1630 (2000) REFERENCE 8 AUTHORS Shibata,K., Itoh,M., Aizawa,K., Nagaoka,S., Sasaki,N., Carninci,P., Konno,H., Akiyama,J., Nishi,K., Kitsunai,T., Tashiro,H., Itoh,M., Sumi,N., Ishii,Y., Nakamura,S., Hazama,M., Nishine,T., Harada,A., Yamamoto,R., Matsumoto,H., Sakaguchi,S., Ikegami,T., Kashiwagi,K., Fujiwake,S., Inoue,K., Togawa,Y., Izawa,M., Ohara,E., Watahiki,M., Yoneda,Y., Ishikawa,T., Ozawa,K., Tanaka,T., Matsuura,S., Kawai,J., Okazaki,Y., Muramatsu,M., Inoue,Y., Kira,A. and Hayashizaki,Y. TITLE RIKEN integrated sequence analysis (RISA) system-384-format sequencing pipeline with 384 multicapillary sequencer JOURNAL Genome Res. 10, 1757-1771 (2000) COMMENT cDNA library was prepared and sequenced in Mouse Genome Encyclopedia Project of Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in RIKEN. Division of Experimental Animal Research in Riken contributed to prepare mouse tissues. Tissues were provided by Kirk W. Beisel ( Boys Town National Research Hospital 555 North 30th Street Omaha,NE 68131 USA ) whose assistance we gratefully acknowledge. Please visit our web site for further details. URL:http://www.osc.riken.jp/ URL:http://fantom.gsc.riken.jp/ clone information is available at: http://fantom.gsc.riken.jp/3/db/annotate/ main.cgi?masterid=F930041A15 FEATURES Location/Qualifiers source 1..2267 /clone="F930041A15" /db_xref="FANTOM_DB:F930041A15" /db_xref="MGI:3559467" /db_xref="taxon:10090" /dev_stage="adult" /mol_type="mRNA" /note="clone_lib: RIKEN full-length enriched mouse cDNA library" /organism="Mus musculus" /strain="C57BL/6J" /tissue_type="inner ear" CDS <1..1945 /codon_start=2 /note="natriuretic peptide receptor 2 (MGD|MGI:97372 GB|NM_173788, evidence: BLASTN, 99%, match=2195)" /note="putative" /note="start codon is not identified" /protein_id="BAE34402.1" /transl_table=1 /translation="GSASSQPAAHYSGAEKQIWWTGRPIPWVKGAPPLDNPPCAFDLD DPSCDKTPLSTLAIVALGTGVTFIMFGVSSFLIFRKLMLEKELASMLWRIRWEELQFG NSDRYHKGAGSRLTLSLRGSSYGSLMTAHGKYQIFANTGHFKGNVVAIKHVNKKRIEL TRQVLFELKHMRDVQFNHLTRFIGACIDPPNICIVTEYCPRGSLQDILENDNINLDWM FRYSLINDLVKGMAFLHNSIISSHGSLKSSNCVVDSRFVLKITDYGLASFRSTAEPDD SHALYAKKLWTAPELLSGNPLPTTGMQKADVYSFAIILQEIALRSGPFYLEGLDLSPK EIVQKVRNGQRPYFRPSIDRTQLNEELVLLMERCWAQDPTERPDFGQIKGFIRRFNKE GGTSILDNLLLRMEQYANNLEKLVEERTQAYLEEKRKAEALLYQILPHSVAEQLKRGE TVQAEAFDSVTIYFSDIVGFTALSAESTPMQVVTLLNDLYTCFDAIIDNFDVYKVETI GDAYMVVSGLPGRNGQRHAPEIARMALALLDAVSSFRIRHRPHDQLRLRIGVHTGPVC AGVVGLKMPRYCLFGDTVNTASRMESNGQALKIHVSSTTKDALDELGCFQLELRGDVE MKGKGKMRTYWLLGEQKGPPGLL" BASE COUNT 566 a 598 c 571 g 532 t ORIGIN 1 gggttctgct tcctcacagc ccgcagccca ttactctgga gcagagaagc agatttggtg 61 gacaggccgg ccaattccct gggtgaaggg ggccccacct ttggacaatc ccccctgtgc 121 ctttgacttg gacgacccat cctgtgataa aactccactt tccactctgg caatcgtggc 181 cctgggcacg ggagtcacct tcatcatgtt tggtgtttcc agtttcctaa ttttccggaa 241 gctgatgctg gagaaggagc tggctagcat gctatggcgc attcgctggg aagaactgca 301 gtttggcaac tcggatcgct atcacaaggg tgcaggcagt cgcctgacgc tgtcgctgcg 361 gggatccagt tacggctcgc tcatgacagc ccatgggaaa taccagatct ttgccaacac 421 cggtcacttc aagggaaatg ttgttgccat caaacacgtg aataagaagc gcatcgagct 481 gacccggcaa gttctgtttg aactcaaaca catgagagat gtccagttca accatcttac 541 tcgcttcatc ggagcctgca tagaccctcc caacatctgc attgtcaccg agtattgtcc 601 tcgtgggagc ttacaagata ttctagaaaa tgacaacatc aatttggact ggatgtttcg 661 ctactcgctc atcaatgacc ttgtgaaggg tatggccttt ctccacaaca gcattatttc 721 atctcatgga agcctcaagt cctccaactg tgtggtggat agtcgatttg tgctcaaaat 781 aacagattac ggtctggcta gtttccgatc aactgctgaa ccggacgaca gccatgccct 841 ctatgccaag aagctgtgga ctgccccaga actgcttagc gggaacccct tgccaactac 901 aggcatgcag aaagcagatg tctacagctt tgccatcatt ctacaggaaa tagcacttcg 961 aagtggtcct ttctacttgg aaggcctgga cctcagtccc aaggagattg tccagaaggt 1021 gcggaatggt cagaggccgt atttccggcc aagcattgac cggacacaac tgaatgaaga 1081 gttagttttg ctgatggaga gatgctgggc ccaggaccca acagaacgtc cagactttgg 1141 gcaaatcaag ggcttcattc gccggtttaa caaggaaggt ggtaccagca tattggacaa 1201 cctcttgctg cgcatggaac agtatgctaa taacctggaa aagctggtgg aggaacgcac 1261 acaggcctat ctagaggaga aacgcaaagc ggaggccctg ctgtaccaaa ttctacccca 1321 ttctgtagca gagcagttaa agcggggaga gacggttcag gcggaggcct tcgacagcgt 1381 caccatctac ttcagtgaca tcgtgggctt cacagcgctg tcagctgaga gcacccccat 1441 gcaggtggtg acacttctta atgaccttta tacctgcttt gatgccatta tcgacaactt 1501 tgatgtctac aaggtggaaa ccattgggga tgcctacatg gtagtatctg gccttccagg 1561 ccgaaacggt cagcgccatg caccagaaat tgctcgaatg gccctagcat tgctagatgc 1621 tgtctcttcc ttccgcatcc gccatcgacc ccatgaccag ctgaggttac gcataggtgt 1681 ccatactggg ccagtctgtg ctggggtggt tggcctgaag atgccccggt actgtctttt 1741 tggagacaca gtaaacactg cttctcgaat ggagtcgaat ggccaagctc taaagatcca 1801 tgtctcctcg accaccaagg acgccctgga tgagctggga tgcttccagc tcgagctccg 1861 tggggatgtg gagatgaagg gaaaaggaaa aatgcgaact tactggctct tgggagagca 1921 aaagggacct cccggactcc tgtaaagccc aggccggcca tcttctgctg ctggtacttg 1981 gatgggcaat ggtcactgtg tttccacaca gcaaaaacag acgtagccat atcagatgga 2041 aaacatgcat agacacaaac cccctgcctt atgtggaaat catagccccc tgccgctcag 2101 ccttgtacat agacctatcc ctccctgccc tggtcctctt cctgcctcct gtaaatatct 2161 gtatctagac cagaatattt tgtccaagta taaaacaaca acaacaaaaa atcatggtgt 2221 cattgtctgg ggtccaggcc atcccaagag aagaatactg gttgtgg //