LOCUS AK157852 3704 bp mRNA linear HTC 06-OCT-2010 DEFINITION Mus musculus erythroblast cDNA, RIKEN full-length enriched library, clone:K0C0026B03 product:T-cell acute lymphocytic leukemia 1, full insert sequence. ACCESSION AK157852 VERSION AK157852.1 KEYWORDS HTC_FLI; HTC; CAP trapper. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 3704) AUTHORS Arakawa,T., Carninci,P., Fukuda,S., Hashizume,W., Hayashida,K., Hori,F., Iida,J., Imamura,K., Imotani,K., Itoh,M., Kanagawa,S., Kawai,J., Kojima,M., Konno,H., Murata,M., Nakamura,M., Ninomiya,N., Nishiyori,H., Nomura,K., Ohno,M., Sakazume,N., Sano,H., Sasaki,D., Shibata,K., Shiraki,T., Tagami,M., Tagami,Y., Waki,K., Watahiki,A., Muramatsu,M. and Hayashizaki,Y. TITLE Direct Submission JOURNAL Submitted (30-MAR-2004) to the DDBJ/EMBL/GenBank databases. Contact:Yoshihide Hayashizaki The Institute of Physical and Chemical Research (RIKEN), Omics Science Center, RIKEN Yokohama Institute; 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan URL :http://www.osc.riken.jp/ REFERENCE 2 AUTHORS CONSRTM The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) TITLE The Transcriptional Landscape of the Mammalian Genome JOURNAL Science 309, 1559-1563 (2005) REFERENCE 3 AUTHORS CONSRTM RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium TITLE Antisense Transcription in the Mammalian Transcriptome JOURNAL Science 309, 1564-1566 (2005) REFERENCE 4 AUTHORS CONSRTM The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team TITLE Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs JOURNAL Nature 420, 563-573 (2002) REFERENCE 5 AUTHORS CONSRTM The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium TITLE Functional annotation of a full-length mouse cDNA collection JOURNAL Nature 409, 685-690 (2001) REFERENCE 6 AUTHORS Carninci,P. and Hayashizaki,Y. TITLE High-efficiency full-length cDNA cloning JOURNAL Meth. Enzymol. 303, 19-44 (1999) REFERENCE 7 AUTHORS Carninci,P., Shibata,Y., Hayatsu,N., Sugahara,Y., Shibata,K., Itoh,M., Konno,H., Okazaki,Y., Muramatsu,M. and Hayashizaki,Y. TITLE Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes JOURNAL Genome Res. 10, 1617-1630 (2000) REFERENCE 8 AUTHORS Shibata,K., Itoh,M., Aizawa,K., Nagaoka,S., Sasaki,N., Carninci,P., Konno,H., Akiyama,J., Nishi,K., Kitsunai,T., Tashiro,H., Itoh,M., Sumi,N., Ishii,Y., Nakamura,S., Hazama,M., Nishine,T., Harada,A., Yamamoto,R., Matsumoto,H., Sakaguchi,S., Ikegami,T., Kashiwagi,K., Fujiwake,S., Inoue,K., Togawa,Y., Izawa,M., Ohara,E., Watahiki,M., Yoneda,Y., Ishikawa,T., Ozawa,K., Tanaka,T., Matsuura,S., Kawai,J., Okazaki,Y., Muramatsu,M., Inoue,Y., Kira,A. and Hayashizaki,Y. TITLE RIKEN integrated sequence analysis (RISA) system-384-format sequencing pipeline with 384 multicapillary sequencer JOURNAL Genome Res. 10, 1757-1771 (2000) COMMENT cDNA library was prepared and sequenced in Mouse Genome Encyclopedia Project of Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in RIKEN. Division of Experimental Animal Research in Riken contributed to prepare mouse tissues. Tissues were provided by Hiromitsu Nakauchi ( Center for Experimental Medicine, Institute of Medical Science, University of Tokyo 4-6-1, Shirokane-dai, Minato-ku, Tokyo, 108-8639, JAPAN ) whose assistance we gratefully acknowledge. Please visit our web site for further details. URL:http://www.osc.riken.jp/ URL:http://fantom.gsc.riken.jp/ clone information is available at: http://fantom.gsc.riken.jp/3/db/annotate/ main.cgi?masterid=K0C0026B03 FEATURES Location/Qualifiers source 1..3704 /cell_type="erythroblast" /clone="K0C0026B03" /clone_lib="RIKEN full-length enriched mouse cDNA library" /db_xref="FANTOM_DB:K0C0026B03" /db_xref="MGI:3572557" /db_xref="taxon:10090" /mol_type="mRNA" /organism="Mus musculus" /strain="C57BL/6J" CDS 212..1201 /codon_start=1 /note="T-cell acute lymphocytic leukemia 1 (MGD|MGI:98480 GB|BC063060, evidence: BLASTN, 100%, match=3642)" /note="putative" /protein_id="BAE34231.1" /transl_table=1 /translation="MTERPPSEAARSDPQLEGQDAAEARMAPPHLVLLNGVAKETSRA APAEPPVIELGARSGAGGGPASGGGAARDLKGRDAVAAEARLRVPTTELCRPPGPAPA PAPASAPAELPGDGRMVQLSPPALAAPAGPGRALLYSLSQPLASLGSGFFGEPDAFPM FTNNNRVKRRPSPYEMEISDGPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHP PDKKLSKNEILRLAMKYINFLAKLLNDQEEEGTQRAKPGKDPVVGAGGGGAGGGIPPE DLLQDVLSPNSSCGSSLDGAASPDSYTEEPTPKHTSRSLHPALLPAADGAGPR" BASE COUNT 819 a 998 c 1028 g 859 t ORIGIN 1 ggtcttcccg cccgcagcgc caggcctgga ttcgcgctgc ccctgggttt cgcctatttc 61 tgaccgcgca ggacctcacg gcaagctaag taactgctgg tctctcagcg agagccggga 121 aacccagctt cggggtccta cctcgacccc tctccagcgg aggagtggag gtcctaacca 181 gccgagtagg tctctctaaa tatgccccag gatgacggag cggccgccga gcgaggcggc 241 acgcagtgac ccgcaactag agggacagga cgcggccgag gcccgcatgg cccccccgca 301 cctagtcctg ctcaacggcg tcgccaagga gacgagccgc gcagccccgg ctgagccccc 361 cgtcatcgag ctaggagcgc gcagcggcgc ggggggcggc cctgccagtg ggggcggtgc 421 cgcgagggac ttaaagggcc gcgacgcagt agcagccgaa gctcgccttc gggtgcccac 481 caccgagctg tgcagacctc ccggacccgc cccggcgccc gcgcccgcct cggctcctgc 541 agagctgcct ggagacggcc gcatggtgca gctgagcccg cccgcgctgg cagcccctgc 601 cggccccggc cgagcgctgc tctatagcct tagccagccg ctcgcctcac taggcagtgg 661 gttctttggg gaaccggatg ccttccccat gttcaccaac aacaaccggg tgaagaggag 721 gccctcccca tatgagatgg agatttctga tggtcctcac accaaagtag tgcggcgcat 781 cttcaccaac agccgggaac gatggcggca gcagaatgtg aatggggcat ttgctgagct 841 cagaaagctg atccccaccc acccaccaga caagaaacta agcaagaatg agatcctccg 901 ccttgccatg aagtacatca atttcctggc caagttactc aatgaccagg aggaggaagg 961 cacccagcgt gccaagcctg gcaaggaccc cgtggtggga gctggtgggg gtggggcagg 1021 gggtggcatc ccccctgaag accttctaca ggacgtgctt tcccccaact ccagctgtgg 1081 cagctctctg gatggggcag ccagcccgga cagttacaca gaggagccaa cacccaagca 1141 cacttcccgc agcctccatc ctgccctgct gcctgccgct gatggggctg gcccccggtg 1201 atgcgtctgg ggctgcccag ggccagcagg caggggcctt taggcccctg ggttgctggg 1261 cttcagggca ggtgggatga gaagcaggtc aatggactta tgtgaacttc ccttacagtt 1321 tgaactttgg gaagtcccaa ctgaccctag gctggcattt ctgtttcctg catggaaaca 1381 gaagaggcaa acagagtgaa gtagtaggta ctttttctga agatggcacg gtcttctccc 1441 tttcccaagc ccaaagattt ccccaatgat gaggctcaag tgtctagttt tggtctagag 1501 tttgtgagcc ttgttttgga caagatctgg ggttgtcacc tgttacctga ggcatccaat 1561 tggcctctgc cttgcctttc tcccatcccg agctggctgg gtggcttttg tggcagcttc 1621 tgttcaaata cttaggtacc caagagctga ccatttcttg agccccatct tcacccaggt 1681 ccatgttgat ccatccagct tgccagctgc tgtggagagt caagctttga ggtgccttct 1741 tcagggcctg gttggaaaag atggccagta aacagacaac ctgctctcaa ctagctgggg 1801 cagaaaaccc aacagcccct tttgctccag ggaatcagag ctctctccct cactgagact 1861 tgccttccta tcctgtggct gtgaggacca agtcagcagc cttgagcatg ctttgttggg 1921 ctgtgtgcag gcacagaaag ggaaagtgac attagggcaa gcaaagcaag agtgtttggg 1981 gcactgggtt tcaactccag cgcatccctg tttgtgcagg agagcaaagg atagagtgct 2041 ggtgcattgc atgttggtgc tggggctgtg cagcccatag gcttccccag gaagcccgaa 2101 ggaagcttcc cattgcaaga tgtctgttgg ctgatggtct ggatgtccaa atggaggaca 2161 aactgtcctg tacatactct atttgggatt ctgcctgacc agttgttggt tggcaactct 2221 aggccatgat accacccaag atgcagcctg atgctaaggc aaggagtcca gtcagaggca 2281 aggccctggc tgagacctgg gcatgcacct ttgctcagct taactttaag tactctcccc 2341 tcacacaact gcaggcccta cgtgtgtgca tggtaggttg gcttaacatg aaacgagtgc 2401 cccctctaaa acttgtacat gaaagttttg taaagcagac ccttctcctc catcttttaa 2461 agacacaacc cctgcaagtc attttgtaaa gtggagaatc cttttgtagt atggacaaat 2521 accccattgt ttctcccctg tgtcaatcca ggtggtggga ccgatctatc ctaaagctag 2581 gcctgcctat aatgaagttc aagctcatga aacaaagtgc gcagaagtcc tgtgtatctg 2641 tcattgtatt ggtgtcactc agttctcact ctctccaggg tttgcctttg agctagagag 2701 aaaatatcca aaggccccat catgtaacgt atgagcccat cacttttctg ttggagtttc 2761 agcatgatgt ttcagttcac accatgatgg agcctgagta tagacttagg cagacagaga 2821 ctgatcctgt tcctgctccc ctccccttct tattaagtac tgagggcccc caggtaatgg 2881 gacaatgtgg tcagctacta aggcattgtg attctttgtc tcctatcaca ttctgctatc 2941 acatgaacat taaggctggt tctttcccat tgcgtgggag ttagttcaag gggtctgacc 3001 catgaggaaa tgggtccaaa gctgtgtttg cttcttagtg gaatgagttg ggaatgaaaa 3061 ctgtggctct gtaggtggat tctatgagag ggatcacact tttgttggga gcctaagctg 3121 cagttcccta catcagcttt gcagcttcac tgggataaac acgctaggcg gtggacggac 3181 tgtgatcata acattggaag tccattgggt ccgtaaagac tgctctggag cacagagggc 3241 cggtgcatcg cggggggggg gggggcgggg attgcacaca cggggttctg tgttctacac 3301 ccagcacagg cacaaaagaa gcttcataac ccttagtact gaccgtgccg tgaggttcca 3361 gccagagttc aggcctgggc agttgatgtg tttgtgtcat ttggattata aaatattttc 3421 cattgagtta tgtagatgct aatttctcaa gattaatctt aatttctccc cgattccaag 3481 gcaagaaaca ggagtgagaa ggggtgagag atttcgaaag tttctaaagg ggctgggcag 3541 ggaagagcca gggttttggt ctttgtaaga tctaaggaag accctgaatt ctgttctcat 3601 actccatacc ccatatcttt cttcctctgt gtcttccttg cccttaaaga aattgcagca 3661 ttccaagaac aatatctgta caaaggggga aatgtaagca tgag //