LOCUS AK031598 3787 bp mRNA linear HTC 06-OCT-2010 DEFINITION Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030458D19 product:mannan-binding lectin serine protease 1, full insert sequence. ACCESSION AK031598 VERSION AK031598.1 KEYWORDS HTC_FLI; HTC; CAP trapper. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 3787) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Bono,H., Carninci,P., Fukuda,S., Furuno,M., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hirozane,T., Hori,F., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kasukawa,T., Katoh,H., Kawai,J., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numazaki,R., Ohno,M., Ohsato,N., Okazaki,Y., Saito,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Takeda,Y., Tanaka,T., Tomaru,A., Toya,T., Yasunishi,A., Muramatsu,M. and Hayashizaki,Y. TITLE Direct Submission JOURNAL Submitted (16-JUL-2001) to the DDBJ/EMBL/GenBank databases. Contact:Yoshihide Hayashizaki The Institute of Physical and Chemical Research (RIKEN), Omics Science Center, RIKEN Yokohama Institute; 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan URL :http://www.osc.riken.jp/ REFERENCE 2 AUTHORS CONSRTM The FANTOM Consortium, Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) TITLE The Transcriptional Landscape of the Mammalian Genome JOURNAL Science 309, 1559-1563 (2005) REFERENCE 3 AUTHORS CONSRTM RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium TITLE Antisense Transcription in the Mammalian Transcriptome JOURNAL Science 309, 1564-1566 (2005) REFERENCE 4 AUTHORS CONSRTM The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team TITLE Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs JOURNAL Nature 420, 563-573 (2002) REFERENCE 5 AUTHORS CONSRTM The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium TITLE Functional annotation of a full-length mouse cDNA collection JOURNAL Nature 409, 685-690 (2001) REFERENCE 6 AUTHORS Carninci,P. and Hayashizaki,Y. TITLE High-efficiency full-length cDNA cloning JOURNAL Meth. Enzymol. 303, 19-44 (1999) REFERENCE 7 AUTHORS Carninci,P., Shibata,Y., Hayatsu,N., Sugahara,Y., Shibata,K., Itoh,M., Konno,H., Okazaki,Y., Muramatsu,M. and Hayashizaki,Y. TITLE Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes JOURNAL Genome Res. 10, 1617-1630 (2000) REFERENCE 8 AUTHORS Shibata,K., Itoh,M., Aizawa,K., Nagaoka,S., Sasaki,N., Carninci,P., Konno,H., Akiyama,J., Nishi,K., Kitsunai,T., Tashiro,H., Itoh,M., Sumi,N., Ishii,Y., Nakamura,S., Hazama,M., Nishine,T., Harada,A., Yamamoto,R., Matsumoto,H., Sakaguchi,S., Ikegami,T., Kashiwagi,K., Fujiwake,S., Inoue,K., Togawa,Y., Izawa,M., Ohara,E., Watahiki,M., Yoneda,Y., Ishikawa,T., Ozawa,K., Tanaka,T., Matsuura,S., Kawai,J., Okazaki,Y., Muramatsu,M., Inoue,Y., Kira,A. and Hayashizaki,Y. TITLE RIKEN integrated sequence analysis (RISA) system-384-format sequencing pipeline with 384 multicapillary sequencer JOURNAL Genome Res. 10, 1757-1771 (2000) COMMENT cDNA library was prepared and sequenced in Mouse Genome Encyclopedia Project of Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in RIKEN. Division of Experimental Animal Research in Riken contributed to prepare mouse tissues. Please visit our web site for further details. URL:http://www.osc.riken.jp/ URL:http://fantom.gsc.riken.jp/ clone information is available at: http://fantom.gsc.riken.jp/3/db/annotate/ main.cgi?masterid=6030458D19 FEATURES Location/Qualifiers source 1..3787 /clone="6030458D19" /clone_lib="RIKEN full-length enriched mouse cDNA library" /db_xref="FANTOM_DB:6030458D19" /db_xref="MGI:2394847" /db_xref="taxon:10090" /dev_stage="13 days embryo" /mol_type="mRNA" /organism="Mus musculus" /sex="male" /strain="C57BL/6J" /tissue_type="testis" CDS 102..2303 /codon_start=1 /note="mannan-binding lectin serine protease 1 (MGD|MGI:88492 GB|NM_008555, evidence: BLASTN, 99%, match=1378)" /note="putative" /protein_id="BAC27469.1" /transl_table=1 /translation="MRFLSFWRLLLYHALCLALPEVSAHTVELNEMFGQIQSPGYPDS YPSDSEVTWNITVPEGFRIKLYFMHFNLESSYLCEYDYVKVETEDQVLATFCGRETTD TEQTPGQEVVLSPGTFMSVTFRSDFSNEERFTGFDAHYMAVDVDECKEREDEELSCDH YCHNYIGGYYCSCRFGYILHTDNRTCRVECSGNLFTQRTGTITSPDYPNPYPKSSECS YTIDLEEGFMVSLQFEDIFDIEDHPEVPCPYDYIKIKAGSKVWGPFCGEKSPEPISTQ THSVQILFRSDNSGENRGWRLSYRAAGNECPKLQPPVYGKIEPSQAVYSFKDQVLVSC DTGYKVLKDNEVMDTFQIECLKDGAWSNKIPTCKIVDCGAPAGLKHGLVTFSTRNNLT TYKSEIRYSCQQPYYKMLHNTTGVYTCSAHGTWTNEVLKRSLPTCLPVCGQPSRALPN LVKRIIGGRNAELGLFPWQALIVVEDTSRVPNDKWFGSGALLSESWILTAAHVLRSQR RDNTVIPVSKEHVTVYLGLHDVRDKSGAVNSSAARVILHPDFNIQNYNHDIALVQLQK PVPLGAHVMPICLPRPEPEGPAPHMLGLVAGWGISNPNVTVDEIILSGTRTLSDVLQY VKLPVVSHAECKASYESRSGNYSVTENMFCAGYYEGGKDTCLGDSGGAFVIFDEMSQH WVAQGLVSWGGPEECGSKQVYGVYTKVSNYVDWLWEEMNSPRAVRDLQVER" regulatory 3766..3771 /note="putative" /regulatory_class="polyA_signal_sequence" polyA_site 3787 /note="putative" BASE COUNT 992 a 1024 c 924 g 847 t ORIGIN 1 gacaaagata aggcatcgct gacaccacac cggggactgg gacgagctca cagacaagtc 61 tggcagaagg aaccaaagcc aggagctcac agagcaggaa aatgaggttc ctgtctttct 121 ggcggctcct cctctaccac gctctgtgcc tcgccctgcc ggaggtttca gcccataccg 181 tggagctaaa cgaaatgttt ggtcagatcc agtcacctgg ctatccagat tcctatccaa 241 gtgactctga ggtgacatgg aatattactg tcccggaggg gtttcgaatc aagctttact 301 tcatgcactt caacttggaa tcctcctatc tttgtgaata cgactatgtg aaggtagaaa 361 cagaagacca ggtgctggca accttttgtg gcagggagac caccgatact gagcagaccc 421 ccggccagga agtggttctt tcgcctggca ccttcatgtc ggtcactttc cggtcagatt 481 tctccaatga ggaacgattc acaggcttcg acgcccacta catggctgta gatgtggatg 541 agtgcaagga gagggaagat gaagagctgt cctgtgacca ctactgtcac aactacatcg 601 gtggctacta ctgctcctgc cgctttggct acatcctcca cacagacaac aggacctgcc 661 gagtggaatg cagcggcaat ctctttaccc agaggacagg cacaatcacc agccccgatt 721 accccaaccc ttatcccaag agctcagaat gttcctatac cattgacctg gaggaaggct 781 tcatggtcag cctgcagttt gaggacattt ttgacattga agaccatcct gaggtgccct 841 gtccctatga ctacattaag attaaagctg gttcaaaagt atggggtccc ttctgtggag 901 agaaatcccc agaaccaatc agcacccaga ctcacagtgt ccagatccta ttccgcagcg 961 acaactcagg agagaaccga ggctggaggc tctcctacag agcggcagga aatgagtgcc 1021 caaagctaca gcctcctgtg tacgggaaaa tcgagccctc gcaggccgtg tattccttca 1081 aagaccaagt gctcgtcagc tgtgacacag gctacaaagt gctaaaggat aacgaggtga 1141 tggacacatt ccaaattgag tgtctgaagg acggtgcatg gagtaacaag atccccacct 1201 gtaaaattgt agactgtgga gctcctgcag ggctgaaaca tgggctagta accttctcca 1261 ccagaaacaa cctcaccaca tacaaatctg agataaggta ctcctgccaa cagccctatt 1321 acaagatgct tcacaatacc acaggtgtat atacgtgttc tgctcatggg acctggacga 1381 acgaagtgct caagagaagc ctgcccacct gccttccagt gtgtggacag ccctcccgcg 1441 ccctgccaaa cctggtgaag agaatcatcg gaggtcgcaa tgctgagctt ggcctcttcc 1501 catggcaggc cctcatagtg gtggaagaca catcgagggt accaaacgac aagtggttcg 1561 ggagtggggc cctgctctct gagtcctgga tactcacagc agcccatgtt ctgcgttccc 1621 agcgcagaga caacacagtc atacctgtct cgaaggaaca tgtcaccgtc tatctgggcc 1681 ttcatgatgt tcgggacaaa tcaggagctg tcaatagctc tgctgcccga gtgatactcc 1741 atccagactt taacatccag aactacaacc atgacatcgc tctggtacag ctacagaagc 1801 ctgtgccctt gggggcccat gtcatgccca tctgtctacc aagacctgag cctgaaggtc 1861 cagcccctca catgttggga ctggtggctg gctggggcat ctccaatcct aatgtgacag 1921 tggacgagat catcctcagt ggcacacgaa ccttatcaga tgtcctacag tatgtcaaat 1981 tacccgtggt gtcacatgct gaatgcaaag ccagctatga gtctcggtcg ggcaactaca 2041 gtgtcacaga gaacatgttc tgtgctggct actatgaggg tggcaaggat acgtgtcttg 2101 gggatagcgg tggggccttc gtcatctttg atgagatgag ccagcactgg gtagcccaag 2161 gcctggtgtc ctggggagga cctgaagaat gtggtagcaa gcaagtgtat ggagtctaca 2221 caaaggtctc caactatgtg gactggctat gggaggagat gaactccccg agggctgtca 2281 gggacctcca ggtagaacgg tgaaggcaag tacttccctg ccccagttca agtgaggtta 2341 caccacacac tgccaacagc atagtccatg attcttacca gatcaaataa actgcagcac 2401 actcatgctc ctgagatagc cccaactccc aagactgggg ttagcaatat gcaggggaaa 2461 tctctaggca agagagtaca gtccaaagct agaaccaagc ctcttcctct ctctgagcct 2521 ctcctctcca gtaggggcgg agtttccaga aggcttggag cctctctaag tgtcaatcac 2581 tcctaatcac ttttcaaggc cgtggagccc agtgttgatg taagaaagct tggtcctgat 2641 cattaggaaa ggattccttc agctaaagtc tgcatccatg tacttgccca gctccagttt 2701 ctagacttgc actaaacctg gttcttcatc tagaaaatag caattcaggt ttgggggacc 2761 aagagcagag cccgagctgt ccctcagaga acactgtctg gaaacacttt tgttcctggg 2821 acttgtctta aaagcttcct gtagtgcaag gtttgtgcct tgtgccctcc gttagtttca 2881 gacaaccgaa agataccacg atggctctgc tacctgaagg agaagaccaa ctgcagctct 2941 cccaagccct gaaacactgc tgtccactcc gaacacatcg ggcccatgtg ccactcaaat 3001 accagagggc accatgaggt gtcaacacct gccactccac acaaacacag agcagccctc 3061 cagctctgga aagtgacctg cccccagcca cgtgtatgga gactacttga agaaagagaa 3121 gactgcccca ctgtgcccca ctgtgcccca ctgtgcccca ctgtgcccca ttgcttctca 3181 gcaggaaaac agaagaaaat atgggcacaa gacttgccag gtcactctaa tatttgagac 3241 tatgctcaac ccagagcctg agctcagtag agaatatacc aagtagcata ctccaaccca 3301 tctatccctt gctgttctgg gagtcaaggt caagggacag agtctcattg gaaagagaca 3361 gagagccatg agtcctgggt tctgtcccta gctccatctt cagctgccca tatgaccttt 3421 gccatcattt cctcctgtga gcttcagtct cctcatctgg aaggtcccat agggtctgac 3481 cagtgctctc aatgggcact gccctgaatt ctagcagcat ctgtagctct cacaggctga 3541 gtgctcgcta tcccagggat ctccatcaga aaaaaaacaa aaaagcagct ggaaaggcct 3601 ggagagggaa tgtggaggga actgggaaga gtcatcaaaa cacactccaa tatctatgaa 3661 tggcacatgt aaaggatact atattttgtg tatttaatat cacgggctct gctactctat 3721 aagggcctct gcactccgtt tctcttgtca ggggtctaca gtggaaataa atctatggat 3781 aaccaac //