LOCUS AJFE02059362 1365 bp DNA linear PRI 18-AUG-2015 DEFINITION Pan paniscus isolate Ulindi cntg59561, whole genome shotgun sequence. ACCESSION AJFE02059362 AJFE02000000 VERSION AJFE02059362.1 DBLINK BioProject: PRJNA49285 BioSample: SAMEA1029457 KEYWORDS WGS. SOURCE Pan paniscus (pygmy chimpanzee) ORGANISM Pan paniscus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan. REFERENCE 1 (bases 1 to 1365) AUTHORS Prufer,K., Munch,K., Hellmann,I., Akagi,K., Miller,J.R., Walenz,B., Koren,S., Sutton,G., Kodira,C., Winer,R., Knight,J.R., Mullikin,J.C., Meader,S.J., Ponting,C.P., Lunter,G., Higashino,S., Hobolth,A., Dutheil,J., Karakoc,E., Alkan,C., Sajjadian,S., Catacchio,C.R., Ventura,M., Marques-Bonet,T., Eichler,E.E., Andre,C., Atencia,R., Mugisha,L., Junhold,J., Patterson,N., Siebauer,M., Good,J.M., Fischer,A., Ptak,S.E., Lachmann,M., Symer,D.E., Mailund,T., Schierup,M.H., Andres,A.M., Kelso,J. and Paabo,S. TITLE The bonobo genome compared with the chimpanzee and human genomes JOURNAL Nature 486 (7404), 527-531 (2012) PUBMED 22722832 REFERENCE 2 (bases 1 to 1365) AUTHORS Pruefer,K., Munch,K., Hellmann,I., Akagi,K., Miller,J.R., Walenz,B., Koren,S., Sutton,G., Kodira,C., Winer,R., Knight,J.R., Mullikin,J.C., Meader,S.J., Ponting,C.P., Lunter,G., Higashino,S., Hobolth,A., Dutheil,J., Karakoc,E., Alkan,C., Sajjadian,S., Catacchio,C.R., Ventura,M., Marques-Bonet,T., Eichler,E.E., Andre,C., Atencia,R., Mugisha,L., Patterson,N., Siebauer,M., Good,J.M., Fischer,A., Ptak,S.E., Lachmann,M., Symer,D.E., Mailund,T., Schierup,M.H., Andres,A.M., Kelso,J. and Paabo,S. TITLE Direct Submission JOURNAL Submitted (06-MAR-2012) Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, Leipzig 04103, Germany REFERENCE 3 (bases 1 to 1365) AUTHORS Pruefer,K., Munch,K., Hellmann,I., Akagi,K., Miller,J.R., Walenz,B., Koren,S., Sutton,G., Kodira,C., Knight,J.R., Mullikin,J.C., Meader,S.J., Ponting,C.P., Lunter,G., Higashino,S., Hobolth,A., Dutheil,J., Karakoc,E., Alkan,C., Sajjadian,S., Catacchio,C.R., Ventura,M., Marques-Bonet,T., Eichler,E.E., Andre,C., Atencia,R., Mugisha,L., Patterson,N., Siebauer,M., Good,J.M., Fischer,A., Ptak,S.E., Lachmann,M., Symer,D.E., Mailund,T., Schierup,M.H., Andres,A., Kelso,J. and Paabo,S. TITLE Direct Submission JOURNAL Submitted (15-JUL-2015) Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, Leipzig 04103, Germany COMMENT The reads of this assembly are deposited under BioProject PRJEB2481. The mitochondrial sequence is GenBank Accession Number KT153251. ##Genome-Assembly-Data-START## Assembly Method :: Celera Assembler v. 5.4.3 Assembly Name :: panpan1.1 Genome Coverage :: 26x Sequencing Technology :: 454 GS FLX; 454 GS FLX Titanium ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..1365 /organism="Pan paniscus" /mol_type="genomic DNA" /submitter_seqid="cntg59561" /isolate="Ulindi" /db_xref="taxon:9597" /sex="female" /geo_loc_name="Germany" BASE COUNT 376 a 315 c 388 g 286 t ORIGIN 1 aggcaggaga atcgacttga ttgaacctgg gaggcagagt ttgcagtggg ccggggtcgt 61 gccactgcac tctaggctgg gagacagcaa gactccatct aaaaaaaaaa acagaactgg 121 gctgggcaca gtggcttata tttgtaatcc cagcactttg ggaggctgag gttggaggac 181 tgcttgagcc cagagtttgg gactataaca gctgaggtag gcggatcact tgaggtcagg 241 agatggagac cagcctggcc agcgtggcga aaccccgtct ctaccaaaaa tataaaaaat 301 tagccaggcg tggtagaggg cgcctgtaat ctcagctact caggaggctg aggcaggaga 361 atcgcctgaa cctgggaggc ggaggttgca gtgagctgag attgcaccac tgcactccag 421 cctgggtaac agagcgagac tccgtatcaa agaaaaagaa aaagaaaaaa tgctggaggg 481 gccactttag ataagccctg agttggggct ggtttggggg gaacatgtaa gccaagatca 541 aaaagcagtg aggggcccgc cctgacgact gctgctcaca tctgtgtgtc ttgcgcagga 601 gacactgtcg gacattcggg aaggtgcgcc gctaggggtc cacctgcctt tcgtgggcta 661 ctcctactcc tgcatggccc tcaggtaagc actgccctgg acggcctcca ggggccacga 721 ggctgcttga gcttcctggg tcctgctcct tggcagccaa tggagttgca ggatcagtct 781 tggaacctta ctgttttggg accaaagact cctaaaaggc cagagttgga ggaccttaaa 841 ttttcagatc tatgtacttc aaaatgttag attgaatttt aaaacctcag agtcacagac 901 tgggcttccc agaatcttgt aaccattaac ttttacttct gtagtacaca gagccacagg 961 acttcagaac ttggaaaata taaagtttag acttttacaa tcagttgtaa aagaatgcaa 1021 attctttgaa tcagccatat aacaataagg ccatttaaaa gtattaattt aggcgggccg 1081 cggtggctca ctcctgtaat cctagcactt tgggaggcca aggcaggtgg atcacgaggt 1141 caggagatcg agaccatcct ggctaacacg gtgaaacccc gtctctacta aaaatacaaa 1201 aaaattagcc gggcgtggtg gcgggcgcct gcggtcccag ctactcagga ggcgaggcag 1261 gagaatggca tgaacccggg aggcggagct tgcagtgagc cgagatcatg ccactgcact 1321 ccagcctggg cgacagagca agactccatc tcaaaaaaaa aaaag //