LOCUS AJ703801 4108 bp DNA linear PHG 05-NOV-2004 DEFINITION Sulfolobus islandicus rod-shaped virus 1 ORF67, ORF88, ORF49, ORF129, ORF118, ORF138, ORF107 and ORF102. ACCESSION AJ703801 VERSION AJ703801.1 KEYWORDS ORF102; ORF107; ORF118; ORF129; ORF138; ORF49; ORF67; ORF88. SOURCE Sulfolobus islandicus rod-shaped virus 1 ORGANISM Sulfolobus islandicus rod-shaped virus 1 Viruses; Ligamenvirales; Rudiviridae; Rudivirus. REFERENCE 1 (bases 1 to 4108) AUTHORS Peng X. JOURNAL Submitted (05-MAY-2004) to the INSDC. Peng X., Department of Biological Chemistry, University of Copenhagen, Soelvgade 83H, 1307 Copenhagen, DENMARK. REFERENCE 2 AUTHORS Peng X., Phan H., Kessler A., Garrett R.A., Prangishvili D. TITLE Multiple variants of the archaeal rudivirus SIRV1: evolution of a population of DNA virus species JOURNAL Unpublished. FEATURES Location/Qualifiers source 1..4108 /organism="Sulfolobus islandicus rod-shaped virus 1" /host="Sulfolobus islandicus" /mol_type="genomic DNA" /note="virus variant II" /db_xref="taxon:157898" CDS 603..806 /transl_table=11 /product="hypothetical protein" /note="ORF67" /db_xref="UniProtKB/TrEMBL:Q5W371" /protein_id="CAG28262.1" /translation="MSFYIYDISERKMKKMVQVGNVRYFIESEDDVVSVVHELARKNY SVQQIAGFLGVSVRKVKQYLESC" CDS 996..1262 /transl_table=11 /product="hypothetical protein" /note="ORF88" /db_xref="GOA:Q5W370" /db_xref="UniProtKB/TrEMBL:Q5W370" /protein_id="CAG28263.1" /translation="MSEDLLVEEIDNISILKCKICGKIIGVIEKKEISNYAKVLRNCN HFNWGYIDRKFADNNSLLFGIIIYHILFYAIGKNKYYLLYKVKN" CDS 1343..1492 /transl_table=11 /product="hypothetical protein" /note="ORF49" /db_xref="UniProtKB/TrEMBL:Q5W369" /protein_id="CAG28264.1" /translation="MSKKLEYIMKLLDEYLEEYDFCDEQELKQLEKILKRIEYVINYC YLGDQ" CDS 1703..2092 /transl_table=11 /product="hypothetical protein" /note="ORF129" /db_xref="UniProtKB/TrEMBL:Q5W368" /protein_id="CAG28265.1" /translation="MNTQIKVESYVQEEVKVIFSEFEKFLRNKSSETKNIKYNSGFPV TSEELEDFLHEFWMIIGKYESELYENEVGNVYHAQFIVKYKKIIVSVSFYFVKEDNIY KLVQVTFDKIFFGKLYELKRQLSQKKQ" CDS 2228..2584 /transl_table=11 /product="hypothetical protein" /note="ORF118" /db_xref="UniProtKB/TrEMBL:Q5W367" /protein_id="CAG28266.1" /translation="MVTLSMRLQDFLNEVFELAEKYTRNSREKKNIFKRIRRKMIEKK IIEGIEKYYYTFYLYLYHGLDLTKNEIEFTFEDEYENKFEKIKIIVKAYFKVKIEDNE FKLINVKFEKSVKSIS" CDS 2728..3144 /transl_table=11 /product="hypothetical protein" /note="ORF138" /db_xref="UniProtKB/TrEMBL:Q5W366" /protein_id="CAG28267.1" /translation="MSQEINQVNEFPLNQIEIENKPLKHPGVKKLEKVLKFIQQAFDL KFKSGFHSVKIKISNADLKILPYGVIYIEVEGQKIKLQWSNDKEMIAIDFKIGSYEFS ISNVHIIFEGHMELRTYDNNIIIELEPYSKVFVYSS" CDS 3312..3635 /transl_table=11 /product="hypothetical protein" /note="ORF107" /db_xref="UniProtKB/TrEMBL:Q5W365" /protein_id="CAG28268.1" /translation="MVKMGVTQELRQTIEEIKKLLQSDVTGVEVINFREPINIHIYEL QTIIDILTYNDGKHYWFIAGTERKRYDLFVFDNEKELKRIIIESHFNVERIFIXSIQL IRYPR" CDS 3779..4087 /transl_table=11 /product="hypothetical protein" /note="ORF102" /db_xref="InterPro:IPR009804" /db_xref="UniProtKB/Swiss-Prot:Q8QL51" /protein_id="CAG28269.1" /translation="MEFEDLDVVLYVFFENPEMKSFEFEFKQLFETTESGLRYLIGVP DSRNKIKNNNEIIEEFIYYQNDDIVTKLIFYYTKGTNRIYIRKIYGWKEKRLESEDEE " BASE COUNT 1636 a 348 c 631 g 1482 t ORIGIN 1 ggaaatatta attactacac atattcagaa atttcactac agttttttgc gtttgcaatg 61 gaggaaattg gaagtttaga aagaaaagtt taaatactac cagaagacat ttaattatag 121 tagtgaggac tatccttctt ttttttatta ttttttttat tttattaata ttattacagt 181 cgtaatattt tgttatttat atatttctat attatgctaa ttagctaatt atcatattat 241 atatattagc taactagcta gatagtaatt attaattata taattatttt cagactcaaa 301 atagattgtt ttagactttt ttaccgctcc aattggaagt taggatttta ggttgagaaa 361 tgaaataata attgtaagct gttaaaaatc tgtttgttta gcagttcaat ttgtttcagc 421 mtaggaataa aaagtggcct ytttrawwta wttggagkgr rawaaattgt ttttttcact 481 tttgtaaaaa aaagtggcct tttttaaaaa attggatgtg taaaaattgg aatcttcaat 541 ctgattctta aaaattgaaa gtcgaaaaat gaaagcgtaa aagttgagag aaaactttat 601 atatgagttt ttacatatat gatattagtg aaagaaagat gaaaaagatg gttcaagtcg 661 gtaacgtaag atatttcata gaaagcgagg atgatgttgt tagtgttgtc catgagttag 721 ctcgaaagaa ctactcagtt caacagattg ctggtttctt aggcgttagc gtgagaaaag 781 tcaaacagta cttagagagc tgttagaaaa gttagcctta tttttttatt tgtaagttct 841 aattcttctt tttcctagtt ttaattttcc ttaaattagc taaggctatg cttaattttt 901 ttcaagtttg tgatattaat tctggagatt gaaaaaatga gttttacata taaaaatata 961 tttgtcaaat tttacagttt gattttagaa atattatgag tgaagattta ttagttgaag 1021 aaattgataa tatttcaatt ttaaaatgca aaatatgtgg aaaaattatt ggtgtaattg 1081 agaaaaaaga aatttcgaat tatgctaaag ttttgagaaa ttgtaatcat ttcaattggg 1141 gatatataga tagaaaattt gccgacaata attctttatt atttggaatt ataatatatc 1201 atattttatt ttatgcaatt ggaaaaaata agtattactt actgtataaa gtgaaaaatt 1261 aaagataaaa aattaaagag ataaaaagat agagaaagat ttatatataa gtttatgcat 1321 atgaaagaat ggtgaaagga aaatgagtaa aaagttagaa tatattatga agttattaga 1381 tgaatattta gaagagtatg atttttgtga tgaacaagaa ttaaagcagt tagaaaagat 1441 tttaaaaaga atagaatatg taataaatta ttgttactta ggcgaccaat agttcttttt 1501 tcttttttct ttattcttat tttattttat tttttatttt ctccttatta gcttaaattg 1561 tcgataattt ttttcattct ttagttaata attctgttga ttgaaaaatt gtaaagatga 1621 aaaagtagag agatagagag ataaaagttt agagaaagat ttaaatatga gaagatacat 1681 atagagaaat gaaggtgaaa atatgaatac gcaaataaaa gtcgaaagtt atgttcaaga 1741 agaagttaaa gtaatttttt ctgaattcga aaagtttttg cgtaacaagt caagtgagac 1801 aaaaaatata aaatataatt cagggtttcc agtgaccagt gaagaattag aagattttct 1861 acatgagttt tggatgataa taggcaaata tgaatctgaa ctatacgaaa atgaagtcgg 1921 taatgtttac catgcccagt tcatcgttaa gtacaaaaaa ataatagtgt cagtaagctt 1981 ttatttcgtt aaagaggaca atatatataa gctagtacaa gtgacttttg acaagatatt 2041 ttttgggaaa ttatacgaac taaagcgaca actaagtcag aaaaaacaat aatttttttt 2101 cttatttttc tttttctttt tatatagcta gttctatcga taattttttt catttgtgtg 2161 atattatttc aagaagttga aaaaatcgat aaataaaaat ttaaaaatgt catagattta 2221 ttaaaatttg gtgacattaa gtatgagact tcaagatttt ctaaatgaag tattcgaatt 2281 agctgaaaaa tatactagga attctagaga aaaaaagaac atatttaaaa gaattagaag 2341 aaaaatgatt gagaaaaaga taatagaagg aattgaaaaa tattattaca cattctatct 2401 ttatttatat catggtctag atctaacaaa aaatgaaatt gaatttacat ttgaagatga 2461 atatgaaaat aaatttgaaa aaatcaaaat tattgttaaa gcatatttta aagtaaaaat 2521 tgaagataat gaatttaagt taataaatgt aaaatttgaa aaatcagtta aatcaatttc 2581 ttagtttttt tctcattttt cattttagaa atactatttc aaaaaactga aaaaattgag 2641 acatgaaaaa atcgaaagat ataagcgtaa aaagatagag aaaactttat atagtagttt 2701 gacaaatata ataatgaggt aagaaaaatg agtcaagaaa taaatcaagt aaatgagttc 2761 cccttaaatc aaatagaaat agaaaataaa ccgcttaaac atccaggcgt gaaaaagtta 2821 gaaaaagtcc taaaatttat tcaacaagct tttgatttaa agttcaagtc tgggttccac 2881 agtgttaaaa taaagatcag taatgcagat ttgaaaattt taccatacgg cgtgatttat 2941 atagaagttg aaggtcaaaa aataaagtta caatggagta atgataagga aatgattgct 3001 attgatttca aaatcggcag ttatgaattt agtatttcaa atgtgcatat aatatttgaa 3061 ggtcatatgg agttaaggac atatgacaac aatataataa ttgagcttga accgtattcg 3121 aaagtttttg tttattcaag ttaatttaat tttttctttt ttctttctaa ttctattttt 3181 taattttttt atttttctat attatatcta agattatgga ctatttttct caagtttgtg 3241 atactaattc tacttcttac catttttgta agacaaaaat ttaaaaatgt cataatttat 3301 agcatttttt agtggtaaaa atgggcgtaa cacaagaatt aagacaaaca attgaggaaa 3361 taaaaaaatt attacaaagt gatgtaaccg gcgtagaagt tataaatttc agagaaccaa 3421 taaatataca tatttatgaa cttcaaacaa taattgatat tttgacatat aatgatggca 3481 aacactattg gtttatcgcg ggaactgaga gaaaaagata tgatttattt gtttttgata 3541 atgaaaaaga attgaaaaga attataatcg aaagccattt taatgtcgaa agaattttta 3601 tcakgtcaat acaattaatt agatatccaa gataattttg tttttttctt tttttctaat 3661 tatctaattc tatcgataat ttttctcatt ttccaaatat tattccaaga ggttgaaaat 3721 attgagagat gaaaatataa aattgtcata gttttatcga aaatatagtg agaaaaaaat 3781 ggaatttgaa gatttagatg tagttctata tgtatttttt gaaaatccag aaatgaaaag 3841 ttttgaattt gaatttaaac aattatttga aactactgag agcggtttaa gatatctgat 3901 aggagttcca gattcaagaa ataaaatcaa aaataataat gaaattattg aagaatttat 3961 atattatcaa aatgatgata ttgttactaa gttgatattt tattatacta aaggcacgaa 4021 tagaatttat ataagaaaaa tttacggctg gaaagagaaa agattagagt ctgaagatga 4081 agaataatta atcaaaaatt tataaaaa //