LOCUS AJ580920 4050 bp mRNA linear ROD 21-OCT-2008 DEFINITION Mus musculus mRNA for tenascin-W precursor (Tnw gene). ACCESSION AJ580920 VERSION AJ580920.1 KEYWORDS tenascin-W; Tnw gene. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 4050) AUTHORS Chiquet-Ehrismann R. JOURNAL Submitted (20-AUG-2003) to the INSDC. Chiquet-Ehrismann R., Growth Control, Friedrich Miescher Institute, Maulbeerstrasse 66, CH-4058 Basel, SWITZERLAND. REFERENCE 2 AUTHORS Scherberich A., Tucker R.P., Samandari E., Brown-Luedi M., Martin D., Chiquet-Ehrismann R. TITLE Murine tenascin-W: a novel mammalian tenascin expressed in kidney and at sites of bone and smooth muscle development JOURNAL J. Cell Sci. 117(Pt 4), 571-581(2004). PUBMED 14709716 FEATURES Location/Qualifiers source 1..4050 /organism="Mus musculus" /mol_type="mRNA" /dev_stage="embryo day 19" /clone_lib="OriGene Technologies Inc. catalog. no. DLM-110" /db_xref="taxon:10090" CDS 47..3937 /gene="Tnw" /product="tenascin-W precursor" /function="extracellular matrix protein for cell adhesion" /db_xref="GOA:Q80Z71" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR002181" /db_xref="InterPro:IPR003961" /db_xref="InterPro:IPR013032" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR020837" /db_xref="InterPro:IPR036056" /db_xref="InterPro:IPR036116" /db_xref="InterPro:IPR041161" /db_xref="MGI:MGI:2665790" /db_xref="UniProtKB/Swiss-Prot:Q80Z71" /experiment="experimental evidence, no additional details recorded" /protein_id="CAE45651.1" /translation="MGLWGMLAFPLGFLLASVLLVASAPATPESPGCSNKEQQVTVSH TYKIDVPKSALVQVETDPQSLSDDGTSLLAPGEDGEEQNIIFRHNIRLQTPQKNCDLA DSVQDLLARMKKLEEEMAELKEQCNTNRCCQGAADLSRHCSGHGTFLPETCSCHCDQG WEGADCDQPTCPGACNGHGRCVDGQCVCDAPYVGVDCAYAACPQDCSGHGVCVQGVCQ CHEDFTAEDCSEQRCPGDCSGNGFCDTGECYCEMGFTGPDCSQVVAPQGLQLLKSTEN SLLVSWEPSSEVDYYLLSYYPLGKEQATKQVRVPKEQHTYDITGLLPGTKYIVTLRNV KKDISSSPQHLLATTDLAVLGTAWVNEETETSLDVEWENPLTEVDYYKLRYGPLTGQE VTEVTVPKSRDPKSRYDITGLQPGTEYKITVVPIRGDLEGKPILLNGRTEIDGPTNVV TNQVTEDTASVSWDPVRADIDKYVVRYIAPDGETKEKAVPKDQSSTVLTGLKPGEAYK VFVWAERGNQGSKKADTKALTEIDSPENLVTDRVTENSLSVSWDPVEADIDRYVVSYT SVDGETKQVPVKKDQRSTVLTGLSPGVEYKVYVWAEKGDRESKKANTKAPTDIDSPKN LVTDQVTENTLSVSWDPVQANIDRYMVSYTSADGETREVPVPKEKSSTVLTGLRPGVE YKVHVWAQKGTQESRKANTKAPTDIDGPKNLVTDQVTETTLSVSWDPVEADIDRYMVR YTSPDGETKEVPVSKDKSSTVLRGLRPGVEYKVDVWAQKGAQDSRKANTKAPTDIDSP KNLVTEQVAESTATVSWDPVEADIDRYVVRYTSADGETREIPVRKEKSSTVLTGLRPG VEYTVQVWAQKGARESKKAKTKAPTEIDSPKNLVTNRVTENTATISWDPVRANIDRYM VRYTSADGETKEIPVSKDQSNTILTGLKPGMEYTIHVWAQKGARESKKADTKALTEID PPRNLRPFGVTHSGGVLTWLPPSAQIDGYILTYQFPNGTVKGVELPRGQQRFELQDLE QGVTYPVSLVAFKGNQRSRTVSTTLSTVDARFPHPSDCSQVQQNTNAASGLYTIYLNG DASRPMQVYCDMDTDGGGWIVFQRRNTGQLDFFKRWRSYVEGFGDPMKEFWLGLDKLH NLTTGTTTRYEVRADLQTFNESAYAVYDFFQVASSKERYKLSVGKYRGTAGDALTYHN GWKFTTFDRDSDIALSNCALTHHGGWWYKNCHLANPNGKYGETKHSEGVNWEPWKGHE FSIPYVELKIRPFGYSRDRFSGRKKRSIGKARMF" sig_peptide 47..124 /gene="Tnw" mat_peptide 125..3934 /gene="Tnw" /product="tenascin-W" misc_feature 347..421 /gene="Tnw" /note="encodes three heptad repeats" misc_feature 545..823 /gene="Tnw" /note="encodes three EGF-like repeats" misc_feature 824..3217 /gene="Tnw" /note="encodes nine fibronectin type III repeats" misc_feature 3218..3934 /gene="Tnw" /note="encodes fibrinogen-like globe" BASE COUNT 1020 a 1058 c 1207 g 765 t ORIGIN 1 agcagcctcc caggcctcct ggagtgtctg atccctttct ccaagaatgg gtctctgggg 61 gatgctcgcc ttccccctgg gatttctgct tgcttctgtg ctcctggtgg cttcggcccc 121 agccactcca gagtctcccg gctgcagcaa caaagagcaa caggtcactg ttagccacac 181 ctacaagatt gacgtgccca agtctgctct ggttcaagta gagaccgacc cacagtcact 241 cagcgatgat gggacatcac tcttggctcc cggggaggat ggggaggagc agaacattat 301 cttcaggcac aacatccgtc ttcagacacc gcagaagaat tgcgacctgg cagacagtgt 361 ccaggacctg ctagcccgga tgaaaaagct ggaggaagag atggcagagc tgaaggagca 421 gtgcaatacc aaccgctgct gccagggggc tgctgatctg agccgtcact gcagtggcca 481 cgggaccttc ctccctgaga cctgcagctg ccactgtgac cagggctggg agggcgcaga 541 ctgtgatcag cccacctgtc ctggggcttg caacggccac gggcgctgtg tggatgggca 601 gtgcgtgtgt gacgcgccct atgtgggggt cgactgcgcc tacgccgcct gtccccagga 661 ctgcagtggg catggcgtgt gcgtgcaggg tgtctgccag tgccacgagg acttcacagc 721 agaggactgc agcgagcagc gctgtcctgg cgactgtagt ggcaatggtt tctgtgacac 781 tggcgagtgt tactgtgaga tgggctttac tggccccgac tgttcccagg tggtggctcc 841 tcagggcctg cagttgctca agagcacgga gaactctctg ctggtgagtt gggagccctc 901 cagtgaggta gactactacc tgctcagcta ctaccccctg gggaaggagc aagctacaaa 961 acaggtccgg gtacccaagg agcagcacac ctatgacatc accggcttgc tgcctggaac 1021 caagtacata gtcaccctgc gcaacgtgaa gaaagacatt tccagcagcc ctcagcatct 1081 acttgccacc acagaccttg ctgtgcttgg cactgcctgg gtaaatgaag agactgagac 1141 atccctcgat gtggagtggg agaaccctct gactgaggtg gactattaca agcttcggta 1201 tggcccctta acagggcagg aggtgacaga ggtcactgtg cccaagagcc gtgatcccaa 1261 gagcagatat gacatcactg gtctgcagcc tggaacggaa tataaaatca cagttgtgcc 1321 catccgaggt gatctggagg gaaagccgat tctcctgaat ggcaggacag aaattgatgg 1381 accaaccaat gtggtcacaa atcaggtgac agaagacaca gcatctgttt cctgggatcc 1441 agtgagggct gacatagaca agtatgtggt gcgctatatc gcccccgatg gggagaccaa 1501 ggagaaggca gtaccaaagg accagagcag caccgttctc acaggcctga agccaggaga 1561 ggcctacaaa gtctttgtgt gggctgagag gggcaaccaa ggcagcaaga aagcagacac 1621 caaggccctc acagaaattg acagtccaga aaacctggtg actgaccggg tgacagagaa 1681 cagcctctct gtctcgtggg acccagtgga ggctgacatc gacaggtatg tggtaagcta 1741 cacttccgtg gatggagaga cgaagcaggt tccagtgaag aaggaccaga ggagcaccgt 1801 cctcaccggc ctgagtcccg gtgtggagta caaagtttac gtgtgggcag agaaaggcga 1861 tcgggagagc aagaaggcca acaccaaggc tcccacagac atcgacagcc ccaaaaactt 1921 ggtaactgac caggtgacag agaacactct cagtgtctcc tgggaccctg ttcaggccaa 1981 cattgacagg tatatggtga gctacacctc tgccgatgga gagacaagag aggtcccagt 2041 gcctaaggag aagagcagta ccgtcctgac tggcctgagg ccaggtgtgg agtacaaggt 2101 ccatgtgtgg gcccagaagg ggacccagga gagcagaaag gccaacacca aggcccccac 2161 agatattgat ggccccaaaa acctggtgac tgaccaggtg accgagacca ctcttagtgt 2221 ctcctgggac ccagtggagg ctgacattga taggtacatg gttcgctaca cgtctcctga 2281 tggagagacc aaggaggtgc ctgtgtcaaa ggataagagc agcacagtcc tgaggggcct 2341 gaggccaggt gtggagtaca aggtggatgt atgggcccag aagggggccc aggacagccg 2401 gaaggccaac accaaggccc ccacagatat tgacagccct aaaaacctag tgactgagca 2461 ggtggcagag agcactgcca ccgtgtcctg ggacccagta gaggctgaca tcgacaggta 2521 tgtggtgcgc tacacctctg ctgatggaga gaccagggag attccagtga ggaaggagaa 2581 gagcagcact gtcctcacag gcctgagacc gggtgtggag tacacggtcc aagtgtgggc 2641 tcagaagggg gcccgggaga gcaagaaggc caaaaccaag gcccccacag aaattgacag 2701 ccccaagaac ttggtgacca accgagtgac agaaaataca gccaccatct cctgggaccc 2761 agtgcgagcc aacattgaca ggtacatggt tcgctacacc tctgcggatg gagagactaa 2821 ggagattcca gtgtcaaagg atcagagtaa caccatcctg acaggcctga aaccaggcat 2881 ggaatatacc attcatgtgt gggcccagaa gggggcccgg gagagcaaga aggctgatac 2941 caaggcccta acagaaattg accctcccag aaatctccgt ccgttcgggg taacacattc 3001 tggtggggtt ttgacctggt tgcccccatc tgctcaaatt gatggctaca ttttgaccta 3061 ccagttccca aatggcaccg tgaagggggt ggagctccca agaggccagc agagatttga 3121 attgcaagac ctggaacagg gtgtcaccta tcctgtttcc ttggttgcct tcaaaggtaa 3181 tcagcggagc cggactgtgt ctaccaccct ttctacagtg gatgctcgct ttccacaccc 3241 ctcagactgc agtcaagttc agcagaacac caacgctgcc agtgggctct acaccatcta 3301 cctcaatggt gatgccagcc ggcccatgca ggtgtactgc gacatggaca ctgacggagg 3361 cggctggatt gtcttccaga gacggaacac tgggcagctg gatttcttca agcgttggcg 3421 gagttatgta gaaggttttg gggaccccat gaaggagttc tggcttggac ttgataaact 3481 acataatctc accactggca ccaccactcg gtatgaggtg agggcagact tacagacttt 3541 caatgaatct gcctacgctg tatatgattt cttccaagtg gcatccagca aagagcggta 3601 caagctgtcg gttgggaaat acagaggcac agccggggat gctctcacct accacaatgg 3661 atggaagttc acgacttttg acagagacag tgatattgcc ctcagcaact gtgcactgac 3721 gcatcatggt ggctggtggt ataagaactg ccatttggcc aacccgaatg gcaaatatgg 3781 ggagaccaag cacagcgagg gggtgaactg ggagccatgg aagggacatg agttctccat 3841 tccttatgtg gagctgaaaa tccgcccgtt tggttacagc agagaccgtt tctctggcag 3901 aaagaagcgc tccataggaa aagcaaggat gttctgatgg cccgtgtgag cagtcctcgc 3961 aggagacacc accagctgtg gcagcttggg gcggggtggg tagtggtcac tgcggtctgg 4021 gagtgctcag atagcccgca gaacaaatca //