LOCUS AI662208 577 bp mRNA linear EST 10-MAY-1999
DEFINITION mz96f03.x1 Soares mouse lymph node NbMLN Mus musculus cDNA clone
IMAGE:721277 3' similar to gb:U05252 Mus musculus nuclear matrix
attachment DNA-binding protein SATB1 (MOUSE), mRNA sequence.
ACCESSION AI662208
VERSION AI662208.1
DBLINK BioSample: SAMN00155172
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 577)
AUTHORS Marra,M., Hillier,L., Kucaba,T., Martin,J., Beck,C., Wylie,T.,
Underwood,K., Steptoe,M., Theising,B., Allen,M., Bowers,Y.,
Person,B., Swaller,T., Gibbons,M., Pape,D., Harvey,N., Schurk,R.,
Ritter,E., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R.,
Waterston,R. and Wilson,R.
TITLE The WashU-NCI Mouse EST Project 1999
JOURNAL Unpublished
COMMENT Other_ESTs: mz96f03.y1
Contact: Marra M/WashU-NCI Mouse EST Project 1999
Washington University School of Medicine
4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA
Tel: 314 286 1800
Fax: 314 286 1810
Email: mouseest@watson.wustl.edu
This clone is available royalty-free through LLNL ; contact the
IMAGE Consortium (info@image.llnl.gov) for further information.
This clone was previously sequenced on the 5' end only, this new
data is from the 3' end
High quality sequence stop: 466.
FEATURES Location/Qualifiers
source 1..577
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="taxon:10090"
/clone="IMAGE:721277"
/sex="male"
/tissue_type="lymph node"
/clone_lib="SAMN00155172 Soares mouse lymph node NbMLN"
/dev_stage="4 weeks"
/lab_host="DH10B"
/note="Organ: lymph node; Vector: pT7T3D-PacI; Site_1: Not
I; Site_2: Eco RI; 1st strand cDNA was primed with a Not I
- oligo(dT) primer [5'
TGTTACCAATCTGAAGTGGGAGCGGCCGCGATACTTTTTTTTTTTTTTTTTTTTTTTT
3']; double-stranded cDNA was ligated to Eco RI adaptors
(Pharmacia), digested with Not I and cloned into the Not I
and Eco RI sites of the modified pT7T3 vector. RNA
provided by Dr. Bertrand Jordan. Library constructed and
normalized by Bento Soares and M.Fatima Bonaldo."
BASE COUNT 164 a 130 c 117 g 163 t
ORIGIN
1 ctctttaaaa taaggggcca gtttccaaag actagtgtgg cgggttacag aagaattact
61 aaagaaaagg caatcataac cacagaagtt ataatgctta tttgaggctc cagaataata
121 ataatcaaaa ggaaaaccaa tttctggtat catgctgaca gggtacaaca cctgggtgca
181 gcccttgaac acaaattcta ccaaacagtc cttgacgctt cacccggggc tgccaagcag
241 ttttgtaaaa cacagtaaaa ccttgagtgc tggctgtcct gtccttccaa cttccttcct
301 gtttgtgcaa gtttccgaag attcattggc caaacaataa acaatgaagg tttgtctgag
361 tgaacacaag gtggacttct catgttgtta ggaaataccg gtggtgtggc tgaaaagaat
421 actgttctct cagtctttca agtcggcatt aacgtctgtg ctcccttcca ccgacagctc
481 ttnctctagt ttcactgaga aaaaggntgt tggcgtttta tcctggacgc tctctttcaa
541 tccttaaagc acttctcatc tttgtactnc ggcacat
//