LOCUS AHAT01024459 2093 bp DNA linear VRT 16-DEC-2011 DEFINITION Lepisosteus oculatus contig024459, whole genome shotgun sequence. ACCESSION AHAT01024459 AHAT01000000 VERSION AHAT01024459.1 DBLINK BioProject: PRJNA68247 BioSample: SAMN00706774 KEYWORDS WGS. SOURCE Lepisosteus oculatus (spotted gar) ORGANISM Lepisosteus oculatus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus. REFERENCE 1 (bases 1 to 2093) AUTHORS Di Palma,F., Alfoldi,J., Johnson,J., Berlin,A., Gnerre,S., Jaffe,D., MacCallum,I., Young,S., Walker,B.J., Lander,E.S. and Lindblad-Toh,K. CONSRTM The Broad Institute Genome Assembly & Analysis Group, Computational R&D Group, and Sequencing Platform TITLE The Draft Genome of Lepisosteus oculatus JOURNAL Unpublished REFERENCE 2 (bases 1 to 2093) AUTHORS Di Palma,F., Alfoldi,J., Johnson,J., Berlin,A., Gnerre,S., Jaffe,D., MacCallum,I., Young,S., Walker,B.J., Lander,E.S. and Lindblad-Toh,K. CONSRTM The Broad Institute Genome Assembly & Analysis Group, Computational R&D Group, and Sequencing Platform TITLE Direct Submission JOURNAL Submitted (02-DEC-2011) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 01742, USA COMMENT Sequenced and assembled at the Broad Institute. Samples were provided by Dr. Allyse Ferrara, Nicholls State University, Thibodaux, LA, and Dr. Chris Amemiya, Benaroya Research Institute at Virginia Mason, Seattle, WA. The sample originated from Bayou Chevreuil in St. James Parish. ##Genome-Assembly-Data-START## Assembly Method :: AllPaths v. R38293 Assembly Name :: LepOcu1 Genome Coverage :: 677.5x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..2093 /organism="Lepisosteus oculatus" /mol_type="genomic DNA" /isolate="Spotted Gar 1" /db_xref="taxon:7918" /sex="female" /geo_loc_name="USA: Bayou Chevreuil, St. James Parish, Louisiana" /lat_lon="29.91 N 90.80 W" BASE COUNT 590 a 407 c 397 g 699 t ORIGIN 1 accagatatc ttccacctag atcagacata cagcttcgat ttctcaagta tatgattcat 61 gagttcattg ggaactgcac ccagtatccc aacaaattca gttattacca gcagggattt 121 gatcaggaga tcaaattaag tttagtttta atgtcgatgg gacataaact gcaatagaaa 181 acatctttta cctgaaatat tagttttcaa attatactca gaaaaataac tcaaataaca 241 ccaccatatg gaacttaaag tatggactaa taaagaaagt gaacttatat attataacta 301 gtgaatgcca cagggaataa tagtgtcctt gaaaaatagc ggtgttccat aagatggagt 361 ccttcagttc taatgaactc ctgtactgaa gaaaaccctg tccaccacca tttaggattg 421 agtgcactgt gaggttcaac aggaagagtt ggacattagc cacccttctc ttcacttccg 481 aaaaagcaat ttagcggcga aatttaaaaa tcaaaacgca gtccttgtcc aagcctctgg 541 aaaagcagat gtcatagatg gtgcccaccc cacgtcctag accagatatt tcagagctag 601 gaaccataca agaaatgtta ttttccagag tctgactgga ttattttggt cagatccctc 661 tgaaagatcc acacaagacg atgctcttgt aattggagag atcttacacc ttaaccagct 721 tttatgttta aaagtgtgaa tcctctttca tcaaatgata aactgtcaat cactgtctct 781 ttgttttaag aagcagcatc tgttgctcca ttaactgtgt tcggatgggt cagatttgtt 841 cagtttcatt ttaaggaggt agaagtaagg aataagtagg aaatattttt tttttaattc 901 cttgacaact aagaagacat accacataaa aaaacaataa catttacagt atatcctctg 961 agaatctcct caacaagtgt aagttgacag ttcttgaggg ttctcacaat aatctttcct 1021 gtgatggaca gcaaggcgat gactatttaa tttccacagt tgaacttgtc tcctttcttg 1081 aagattgtcc aagcttggca tcccagagtt cagctggtat ttccttatca tttcctctct 1141 ctctttaatc aaatctccat ccgtaggtct caaagggctc agtgctctga ctttctgagt 1201 gctcaggcta tagtttttgt tttgatggtt ttgactgaaa aactcaagca tattttaaat 1261 gccagtggaa ggctagaaat cctttgcttt gtctttactt ctctttgacg tgatgtctta 1321 atgattcagt gtcttatgct tggagttgaa gtcattcagt tgatgtccta atgacatctt 1381 gattgaaacg tggttgaatt ttcatccaat ttttttattc atctgaattt cagctcaatg 1441 aaaacttgag gttgtggttt ataatcttat cagtcaaacc aatcctgtta aatcagtctt 1501 gtcaaaccag tcctgatatt gcctggatga gaatccattt gtcatcttgc tgtcactttt 1561 gctgctttac ttgaggacac cccaaacact tctttatcgc tgcttgaggt tgaactttat 1621 cacagcgtgg gttgaagagg tcttacttga cagcaacctc cagtcttttc ctgaaaccat 1681 cgtaggggag ctggtttgat ggctatgacc aagcattgga gttgaacatt ggtccagtag 1741 ttctaagttc tgacatattt gaagtgatgt ggacatctct gtgctcctgg caataaacat 1801 tgacatagtc gattaagtac cagtgcttag attggatgtt ttccaaaata ttgggttgat 1861 gtgtgttgat gatgtgaagt ccatgttccg gatgtttagt caggagttga cctttctttc 1921 ctgttcattg cttaccagtg gttctattct agtggtttaa gttccttccc aatcttgttt 1981 tgagatgtca agtcataggg cacttgttta tttccataga aatttcactg ggctgattca 2041 tccattttgg ttgtccaaac cagctttgag atttcagcct ccttcttctg aat //