LOCUS AF502172 2719 bp DNA linear BCT 02-AUG-2002 DEFINITION Rickettsia sibirica elongation factor G (fusA) gene, complete cds; tRNA-Trp gene, complete sequence; and preprotein translocase SecE subunit (secE) gene, complete cds. ACCESSION AF502172 VERSION AF502172.1 KEYWORDS . SOURCE Rickettsia sibirica ORGANISM Rickettsia sibirica Bacteria; Pseudomonadota; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group; Rickettsia sibirica subgroup. REFERENCE 1 (bases 1 to 2719) AUTHORS Amiri,H., Alsmark,C.M. and Andersson,S.G. TITLE Proliferation and deterioration of Rickettsia palindromic elements JOURNAL Mol. Biol. Evol. 19 (8), 1234-1243 (2002) PUBMED 12140235 REFERENCE 2 (bases 1 to 2719) AUTHORS Amiri,H., Alsmark,C. and Andersson,S.G.E. TITLE Direct Submission JOURNAL Submitted (08-APR-2002) Molecular Evolution, Evolutionary Biology, Norby v. 18c, Uppsala 752 36, Sweden FEATURES Location/Qualifiers source 1..2719 /organism="Rickettsia sibirica" /mol_type="genomic DNA" /db_xref="taxon:35793" gene 1..2100 /gene="fusA" CDS 1..2100 /gene="fusA" /codon_start=1 /transl_table=11 /product="elongation factor G" /protein_id="AAM90917.1" /translation="MSKINKLEHIRNIGICAHIDAGKTTTTERILYYTGKSHKIGEVH EGGATMDWMEQEQERGITITSAATTCRWQDKIINIIDTPGHVDFTIEVERSLRVLDGA VAVFDGVAGVEPQSETVWRQADKYNVPRMCFVNKMDRMGADFYRCVEMLKDRLGAKPL VIQLPVGIEENFKGIIDLIKMKAVIWKDEALGAEYFEEDIPADMKDKAEEYRAKLLDM VVELDDHVMEKYLSGEEVTAEEIKRLIRKGTISAAFYPVLCGSAFKNKGVQPLLDAVV DFLPSPIDIGIVKGMEVSTGAEKDFPISVTEPFAALAFKIMNDPFVGSLTFIRIYSGK ITSGTTVINTVKNKREKIGRMLLMHANNREDVKEASAGDIVALAGLKDTTTGDTLSDI DQQVILERMEFPEPVIELAVEPKSTADQEKMGLALSRLAAEDPSFRVSTDYETGQTVI KGMGELHLEIIIDRMRREFKVEANIGAPQVAYRETITKVCEIDYTHKKQSGGAGQFAR VKIIFEPLKEVKDLKDEDKNKNFVFESKIIGGAVPKEYIPGVEKGLNNIRETGVIAGY PMIDFKATLVDGAFHDVDSSVLAFEIAAKAAFREGMPKGNPKLLEPIMQVEVITPDEY MGDIIGDLNSRRGQIQSMDPRGNAQVVTANVPLAEMFGYVNTLRSLSQGRAQFSMIFS HYDQVPSQVADIIKAKK" tRNA 2246..2317 /product="tRNA-Trp" misc_feature 2354..2497 /note="palindromic elements RPE" gene 2519..2719 /gene="secE" CDS 2519..2719 /gene="secE" /codon_start=1 /transl_table=11 /product="preprotein translocase SecE subunit" /protein_id="AAM90918.1" /translation="MFKEYKIYKFFEQVKQETYKVVWPTRKELVASTLVVVVAVFIFS LICLVLDYSIHNIMQLLLNIGK" BASE COUNT 925 a 376 c 578 g 840 t ORIGIN 1 atgagtaaaa taaataaact tgagcatatt cgtaatatcg gtatatgtgc tcacattgat 61 gccggtaaaa ctacaactac cgaacgtatt ttatattata ccggtaaatc gcataaaata 121 ggtgaagttc atgagggcgg tgctaccatg gattggatgg aacaagaaca agaacgtggt 181 ataaccatta cctcagctgc tactacttgt agatggcaag ataaaataat taatattatc 241 gatactcctg gacacgttga ctttactatc gaagtagagc gttcgcttcg tgttcttgac 301 ggtgcggttg cagtatttga cggtgtagca ggtgttgaac cgcagtcaga aacggtttgg 361 aggcaagcag ataaatataa tgttcctaga atgtgttttg tcaataaaat ggacagaatg 421 ggagcagatt tttatagatg cgtggaaatg ctcaaagatc gtttaggagc aaaaccgctt 481 gttattcagt tgcctgtagg gattgaagaa aattttaaag gtatcattga tcttattaaa 541 atgaaagcag tgatttggaa agatgaagca cttggagctg agtattttga agaagatata 601 cctgctgata tgaaagataa agctgaagaa tatcgtgcta aattacttga tatggttgtt 661 gagttagatg atcatgttat ggaaaaatat ttatcaggtg aagaagtaac agcagaagaa 721 attaaaagat taatcagaaa aggtactatt tcagcagcat tttatccggt tttatgcggt 781 agtgctttta aaaataaagg ggtacagcct ttacttgatg ccgtagtaga tttcctacct 841 tcgcctattg atataggtat agtaaaaggt atggaagtaa gtaccggtgc agaaaaagat 901 ttccctattt cggtaactga gccttttgca gctttagcat ttaaaattat gaatgaccca 961 tttgtcggtt cattaacttt tattagaata tattcaggta aaattacttc aggaacaact 1021 gttattaata ccgtaaagaa taaaagagaa aaaatcggta gaatgctatt aatgcatgct 1081 aataatcgtg aagacgtaaa agaagcatca gcaggtgata tagtagcttt agcaggtctt 1141 aaagatacta ccacaggtga tacgttatct gatattgatc agcaagtaat cttagaaaga 1201 atggaatttc cagagccggt aattgagctt gcggtagaac ctaaatcaac agccgatcaa 1261 gaaaaaatgg gcctcgcgct ttctcgttta gcagctgaag atccatcatt tagagtgtca 1321 actgattatg aaacaggaca aacagtgata aaaggaatgg gagagctcca tttagaaatt 1381 atcattgatc gtatgagaag agagtttaag gtcgaagcaa atattggagc tcctcaagta 1441 gcatatcgtg aaactataac aaaagtttgt gaaattgatt atacccataa gaaacaatcc 1501 ggcggtgcag gacaatttgc tcgtgtaaaa attatttttg agcctctaaa agaggtaaaa 1561 gatctaaaag atgaagataa aaataaaaat tttgtctttg aaagtaaaat catcggcggt 1621 gccgtgccta aagaatatat accaggtgtt gaaaaaggat taaataatat tagagaaacc 1681 ggtgttattg ccggttatcc tatgattgat tttaaagcaa ctttagttga cggtgcgttt 1741 catgatgtag attctagtgt acttgcgttt gaaattgctg caaaggcagc atttagagaa 1801 gggatgccga aaggtaatcc taaattactt gagccgatta tgcaagttga agttatcact 1861 cctgatgaat atatgggtga tattataggc gatttaaata gtcgtagagg acaaattcaa 1921 agcatggatc caagagggaa tgctcaagta gttactgcga atgttccttt agcggaaatg 1981 tttggttatg ttaatacgct taggtcttta tctcaaggta gagctcagtt tagtatgata 2041 ttctctcatt atgatcaagt gccgagtcaa gtagctgata ttattaaagc taaaaaataa 2101 tttaggggtg aggtgtcacg tcttacagaa ataaatgttg ttttgccgtg agcttataaa 2161 ttaacagtac tgtttattat agtaattttt taataataac aaatattttt aataactttt 2221 attgattttt tattaaaaat atgataggag tgtagctcaa ttggtagagc gccggtctcc 2281 aaaaccggag tggcgggttc gatacctgtc gctcctgcca ttataggctt agagcttttg 2341 tgctataaaa tatagaattt ttacaaaatt tgcttataga gagaaatttg aaagaggtac 2401 ttcacctcga atcgcagcgt acatactagt atgtgagaat tccagtgctg gattatcgtc 2461 tcaattgcct ctagaagtag cattttgtaa gaagtctaat aaattaccta acaaaaatat 2521 gtttaaagaa tataaaattt ataagttttt tgaacaagtt aaacaagaaa cttataaggt 2581 agtttggcca actagaaaag agcttgttgc ttcaacatta gtagtggtag tagcagtttt 2641 tatttttagc ctaatttgtt tggtacttga ttatagtata cataacataa tgcagctttt 2701 gcttaatatc ggcaaatag //