LOCUS AF483621 2500 bp mRNA linear ROD 17-MAR-2002 DEFINITION Rattus norvegicus RNA-binding protein staufen splice form B (Stau) mRNA, complete cds; alternatively spliced. ACCESSION AF483621 VERSION AF483621.1 KEYWORDS . SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 2500) AUTHORS Tang,S.J., Meulemans,D., Vazquez,L., Colaco,N. and Schuman,E. TITLE A role for a rat homolog of staufen in the transport of RNA to neuronal dendrites JOURNAL Neuron 32 (3), 463-475 (2001) PUBMED 11709157 REFERENCE 2 (bases 1 to 2500) AUTHORS Tang,S.J., Meulemans,D., Vazquez,L., Colaco,N. and Schuman,E. TITLE Direct Submission JOURNAL Submitted (13-FEB-2002) Biology, California Institute of Technology, 1200 E California Blvd. MC 139-74, Pasadena, CA 91125, USA FEATURES Location/Qualifiers source 1..2500 /organism="Rattus norvegicus" /mol_type="mRNA" /strain="Sprague-Dawley" /db_xref="taxon:10116" gene 1..2500 /gene="Stau" CDS 178..1716 /gene="Stau" /note="rStau; alternatively spliced" /codon_start=1 /product="RNA-binding protein staufen splice form B" /protein_id="AAL89719.1" /translation="MANPKEKTPMCLVNELARFHSIQPQYKLLNESGPAHSKMFSVQL SLGEQTWESEGSSIKKAQQAVANKALTESTLPKPVQKPPKSNVNNNPGSITPTVELNG LAMKRGEPAIYRPLDPKPFPNYRANYNFRGMYNQRYHCPMPKIFYVQLTVGNNEFFGE GKTRQAARHNAAMKALQALQNEPIPEKSPQNGESGKEMDDDKDANKSEISLVFEIALK RNMPVSFEVIKESGPPHMKSFVTRVSVGEFSAEGEGNSKKLSKKRAATTVLQELKKLP PLPVIEKPKLFFKKRPKTIIKAGPEYGQGMNPISRLAQIQQARKEKEPDYVLLSERGM PRRRKFVMQVKVGNEVATGTGPNKKIAKKNAAEAMLLQLGYKASTSLQDQLDKTGENK GWSGPKPGFPEPANNTPKGILHLSPDVYQEMEASRHRVTSGTTLGYLSPKDMNQPSSS FFSVESPSPTSSAPAARELLMNGTSPAAEAIGLKGSSPTPPCSSVQPSKQLEYLARIQ GFQV" BASE COUNT 708 a 596 c 552 g 644 t ORIGIN 1 cggagccggc ggcgtcggcg gcggcagagc ggggtcattt ctcgggagcg ctcgccaatg 61 tggaaccgtc tgccgggcgt ccgtggcccg cagttttttg gagctgtgag ggatacagaa 121 gtttgatcaa tattgtctta acatgcttca gataaatcag cttttctcca cgataaaatg 181 gcaaatccca aagagaaaac tccaatgtgt ctggtaaatg agttagcccg tttccatagc 241 atccaacccc agtataaact tctgaatgaa agcgggcctg ctcattcgaa gatgttttcg 301 gtgcagctga gtctgggtga gcagacatgg gaatccgaag ggagcagtat aaagaaggcc 361 caacaggctg ttgcaaataa agctttgact gaatctacgc ttcccaaacc cgttcagaaa 421 ccacccaaaa gtaatgtcaa taataaccca ggcagtataa ctccgactgt ggaactgaat 481 gggcttgcta tgaaaagggg agagcctgcc atctacaggc cgttagaccc aaagccattc 541 ccaaattata gagctaatta caacttccgg ggcatgtaca accagagata tcattgccca 601 atgcccaaga tcttttatgt tcagttgact gtaggaaata atgaattctt tggcgaaggg 661 aagactcggc aagctgccag acacaatgct gcgatgaaag ctcttcaagc cctacagaat 721 gagccaattc cagaaaagtc tcctcagaat ggtgaatcag gaaaagaaat ggatgacgat 781 aaagatgcca ataaatctga aataagctta gtgtttgaaa ttgcgctgaa gagaaatatg 841 cccgtcagtt ttgaggttat taaagaaagt ggaccaccac atatgaagag ttttgttacc 901 cgggtgtctg tgggagaatt ttctgccgaa ggagagggaa atagcaaaaa gctctccaag 961 aaacgtgcag caaccacggt cttacaggag cttaagaaac tcccacctct tcctgtgata 1021 gaaaagccaa aactattttt taaaaaacgc cctaaaacaa taataaaggc tggacccgag 1081 tatggtcaag gaatgaaccc tattagccgc ctggctcaaa tccagcaggc cagaaaggaa 1141 aaggagcctg attacgtttt actttcagaa cgtggaatgc ctcgccgtcg aaagtttgta 1201 atgcaggtca aggtaggcaa tgaagttgcg actggaacag gacctaataa aaagatagcc 1261 aagaaaaatg ctgcagaagc tatgctgtta cagctcggct ataaagcgtc cactagtctt 1321 caggatcagc tcgacaagac cggggaaaac aaaggatgga gtggtccaaa gcctggattt 1381 ccggaaccag cgaataacac tccaaaagga attcttcatc tttctcctga tgtttatcaa 1441 gagatggaag ccagccgcca cagagtgacc tctggcacaa ctctaggcta cttatcaccc 1501 aaagatatga accaaccttc aagctccttc ttcagtgtag agtctccctc accgactagt 1561 tcagccccag ctgccaggga actcctaatg aatggaacat ctcctgctgc tgaagccata 1621 ggtttaaaag gaagttctcc tactccccct tgttcttcag tacagccttc aaaacaactg 1681 gaatatttag caaggattca aggctttcag gtatgatttt aaagaaaaaa caaaaagaga 1741 aagtaaaact cattagcccc aaatctttca tttctgtcta tcagaaggct cattcttgcc 1801 tgctaatgtg gcctccatta acattgtaag ttatttagaa acacaaaaga cagagaaaag 1861 agagtcaaaa cacatcactt tctgtcattt ccatccagga actctgttgc tgcctggctc 1921 tctgccatat tgatattcac atttatattc tctctgcctc tctgtctgtc ggtctctccc 1981 tccctctctg tttcttcccc ttccttcccc gccctccttc ccctctccct ccatgtctcc 2041 atccttccct tcctcctgtg tcctgtcttc cagttggtct tgattggcac atccatcttg 2101 acactttgtt ttgcacaaac aagattctcc cctggagaca tttggtgtta gtgttaacat 2161 cacttcccct catgttacag tcatgggtga gtctttctgc tgctgatctg atttaatagc 2221 agttttgaag ttcccatcct gtagttagta atgacacagg tacatttata aggtccagca 2281 cccttgaagt ctcttacctt agggggcatt aaatgtggca ctgagtaagg ggacactttc 2341 cggttgttgg aggtaacatg agtgtctgtt gttgggtcat gtgctgagcc agggtggtgg 2401 acaagcatcc accccactga tacagcagct gtctcatggt gatcgcatcc tgtgcacagc 2461 tgagttctgt gtatgcattt gggaatgacg cttctcccga //