LOCUS AF296108 7017 bp RNA linear VRL 08-APR-2011 DEFINITION Porcine teschovirus 2 strain Vir 6793/83 polyprotein gene, complete cds. ACCESSION AF296108 VERSION AF296108.1 KEYWORDS . SOURCE teschovirus A2 ORGANISM teschovirus A2 Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Teschovirus; Teschovirus A. REFERENCE 1 (bases 1 to 7017) AUTHORS Zell,R., Dauber,M., Krumbholz,A., Henke,A., Birch-Hirschfeld,E., Stelzner,A., Prager,D. and Wurm,R. TITLE Porcine teschoviruses comprise at least eleven distinct serotypes: molecular and evolutionary aspects JOURNAL J. Virol. 75 (4), 1620-1631 (2001) PUBMED 11160660 REFERENCE 2 (bases 1 to 7017) AUTHORS Zell,R. TITLE Direct Submission JOURNAL Submitted (16-AUG-2000) Institute of Virology, Winzerlaer Str. 10, Jena 07745, Germany FEATURES Location/Qualifiers source 1..7017 /organism="teschovirus A2" /mol_type="genomic RNA" /strain="Vir 6793/83" /serotype="2" /db_xref="taxon:138679" /note="Porcine enterovirus 2" CDS 332..6955 /codon_start=1 /product="polyprotein" /protein_id="AAK12402.1" /translation="MACLKIFSLKHKNKSHSYSPRGVELKYNSDFAFKPRPLAPLLRL EPSDTKTRRIECAEVEFDSWYPNPLDPTSLICDFELEMLQFQGTGTSRMENGNTNNSG NTGVINYNFYSNSYTDAVDLSGAMSSQESNAAENAASGPTSLLKAGINAAAKIGPLLA EPNFEEYKMSDRVDIIQKGTSTIITQNSVGSNTYASCPKSDVTSVADESTSGGPAASR FVTFEAKPWTPAKPVYAFQVAHLPYALVAQNTPFKSLLSKHQLMKCCWIVQVQVNTTR FHGGCLGVFAIPEFNVYSKLSGLASDYAGNSNGTVSDIWDNFSAWHNPEAMYGAWYYK HVYDQKDRHWYKPEAKQYGGVSPQSLFCFPHQLINPRTNSSATLCLPFVDCGPITDVT VHCPWAIVVVVLRELTVATGGTPSVDINVSVAPCDVEYHGLRQNSMYQGPIPKIDIDA SKALFSSTQPYTAPPVYGKIPASSPAFMPGEFFDYVQLAQIPSLVKNREIRVTSSDKT DPIFHMLLRPTDTQTVNTMLGSVTRMFTQWRGSIVIRCVFVGNQMQNCRILMAWTPQG FGATHPTKMEDAMQGHYVIYDTGIDSSADLVIPYVAPYDFTPVRTPYTRTELPPTGDA NQVLVNTPYWSRGYITIWQYTNLASPPGSPSQADFLLFAFAGEDYVLKGPSNMAASYQ GNENSPLQPAETGCDKAMTDNASNENPIPLAVETIGSSRVDFFWDRYFHVVTIPKVSS VDPQYIRLNISDILFDPVIRQSLHATYLRCGISVAVRAMPANPSSTECLDGLTINMLY VPPGSSWAINKIEQTVPIEQAQDSTGNYALPSFTWKPNQTPVFTCSIPYVSFTTVLPT AYSGFETTFSIPKRNNQIPQDFGFGLLILRPSMPPTRELVISAWVKFNNVRLFCPRPG IHDEASYSNNSTSIPGTVTGRLSAAMTTLSLQGPGATNFSLLRQAGDVEENPGPSLSK LYQILRDPAVDALCEAYDELKKFKEQATTLLDSFSGDSENPWLNKFIKYLGYAILAWK SLHDPMTAAAVCFIIGSDVTAFVVSKLAKHLKKFAKTDPPPVPKPRSCKKEGCCCGNK HNYPDELNPFSESGFWSRFKKGHFQGPMQDVSSLINILKGAEWIYHQFEKVIKWLKTW RTAEYEVSSDFLQTQMKDYPHYYRKYKECANNYRHPDRTEVANYFRKMRKCAAHVNPR LMGMFPEFDPSPPDPTRPEPVVVVLRGAPGQGKSVCSEMLARMLSYTLVGKSSYYAFN SATKHFDGYKQQAVTIIDDLGQDTSGEDFRLFCQLVSTTECIVPMADLPDKGMHFKSE ILIANTNLPSFNPITVSDPAAIKRRIFLDLTVEANRAYAKPDGTLDLVRALQPTGRES QSPLLRQDHNILYSDCVAFKHGKHTLSFLEVFEMIKRELQRRQNVSNSLTNLFTFQGP SDDSWFTTFYKKWNLRAKENSEEKLILELIRYCHGSDMLKEYCQLAAANKEKKTDYWN MVRIIEEILAALTLILSLISIMIVMYQLFFQGPYEASAVKPAKPKRQSLLKLVEMQGP KGQANMEMERTLMKKNIIEMTYEKHNGKFQTTTVLFVRDRIFLINTHILTSIKNFHYE NTEIPAASVQKVQAIFDGHPSDVTAVQFTVGRQYRDITNNFINSLPNPGTPIVGLMKT EGSSYMWSGECLPFKTPMNTYEGCVPHVLPYKAVTAHGYCGSVMVADAGVWKGVCGIH SLGDGTIGAATVLSRQHLLNLLEGFLEFQGKIYDVQKADFVYTPTKTSLKPTFVCVDP KLEPAALSHHDPRLKDPENFKAVILSKHVGDSLQLPWGIRWASYKYAEKIRAILPPDF LEPLSIREAVEGIDGLDPMDMDKSPGLPYVKKGLRRTDLWNPKTGPTIELMAEINRYL DYNYDKHVFLTFLKDELRPKEKVQAGKTRVIDVAGFGHAIVGRMLFGRLFAFFHKNPG WNTGSAVGVNPDLAWTQIFYTAPSRNMLAMDYSGFDASHTSGMFCILKHFLTTLGYGT LQLSYIDSLCYSKHHWDDETYRLDGGLPSGCSGTTIFNTIMNNIVARAAASYAAEGPV GILCYGDDILVSSPEKFPVSDWLEFYSKTPYKVTAADKSEQIDWRDITQCTFLKRGFV LDGSLVRPVMDEQHLAELLKWARPGTLQAKLLSIAQLAFHLPRQAYDRLMLPFEEAGY EIPCHERLNEEWREMFI" BASE COUNT 1945 a 1569 c 1549 g 1954 t ORIGIN 1 actagacctc ggtctcttgt tgtgttcaaa cacagaaatc ttgctgcttg gttatgaatt 61 cattggacca atccctctga aagacctgct ctggcgcgag ctaaagcgca attgtcaccg 121 ggtattgcac caatggtggc gacagggtac agaagagcaa gtactcctga ctgggcaatg 181 ggactgcatt gcatatccct aggcacctat tgagaattct ctggggccca ccagcatgga 241 gttcctgtat gggaatgcag gactggactt gtgctgcctg acagggtcgc ggctggccgt 301 ctgtactttg tatagtcagt tgaaactcac tatggcatgt ctgaaaattt tctctctgaa 361 acataagaat aagagccact catactctcc tcgtggagtt gagttgaaat acaattcaga 421 ttttgctttc aaaccaaggc cactggcacc tcttttgcgt cttgagccat ctgacacaaa 481 gacgcgcaga attgagtgtg cagaagtgga atttgattca tggtatccaa atcctttgga 541 cccaacatct ttgatttgtg actttgaact tgaaatgcta caatttcagg gtactggaac 601 ctctagaatg gaaaatggca acactaataa ttctgggaat accggagtga ttaactacaa 661 tttttactcc aactcttaca cagatgcagt tgacctttcc ggggctatgt catcacaaga 721 atcaaacgca gctgagaatg cagcttcggg gccaacttct ctccttaaag ctggaattaa 781 tgctgctgct aagattgggc ctttacttgc tgaaccaaat tttgaggaat ataagatgtc 841 agacagagtg gatatcattc agaaaggaac tagcaccatt ataacgcaga atagtgttgg 901 ttcaaacacc tacgcgagct gtccgaagtc cgatgtcacc tcagtagcag atgagagtac 961 atccggtggg cctgctgctt cccgctttgt gacatttgag gctaagcctt ggacaccagc 1021 aaaacctgtt tatgcttttc aagtagcgca tttaccatat gcacttgttg ctcagaatac 1081 accttttaaa tctcttttgt caaaacacca gcttatgaaa tgttgttgga ttgtgcaagt 1141 gcaagtgaat actaccagat ttcatggtgg ctgcttgggt gtttttgcaa tccctgaatt 1201 caatgtatat tccaaattga gtggccttgc cagcgattac gccggcaatt caaatgggac 1261 agtgtctgac atttgggata atttttcagc ttggcataac ccagaagcaa tgtatggcgc 1321 ttggtattat aaacatgtgt atgatcaaaa agacagacac tggtacaaac cagaagctaa 1381 acaatatggt ggagtatccc cccaatcctt gttttgcttt cctcatcagc tcatcaatcc 1441 aaggacaaat tcatcagcaa cattgtgctt gccctttgtt gactgtggac caataactga 1501 tgtgactgta cactgtccgt gggccatagt ggttgttgtt ttgagagaac tgacagttgc 1561 cactggagga acacctagtg ttgatatcaa tgtctcagtg gccccttgtg acgttgagta 1621 tcacgggcta cgccagaact caatgtacca gggccccata cccaaaatag atattgatgc 1681 aagcaaggct ctcttctcct caacccaacc ctacacggct ccgcccgtgt atgggaaaat 1741 accagcaagc agccctgctt tcatgcctgg agaatttttt gattatgtgc aacttgctca 1801 aattccatcc cttgtgaaga atcgtgagat acgtgttacc agttcagata agactgatcc 1861 catattccat atgctactga gacctactga cacacaaact gtaaatacca tgttgggctc 1921 tgtgactcgg atgttcacac agtggcgcgg gtccatagtt ataaggtgtg tctttgtggg 1981 caaccagatg caaaattgta ggattcttat ggcttggact ccccaaggtt ttggggcaac 2041 ccaccccact aaaatggaag atgcaatgca gggccactac gtaatttatg atactggaat 2101 tgacagcagc gctgatttag taattcccta cgtggccccc tatgatttta ccccagtgag 2161 gacaccctat acaaggaccg agttgccgcc aaccggtgat gctaatcagg ttttggttaa 2221 caccccatac tggtctcgag ggtatataac tatatggcag tacacaaatt tggcctcccc 2281 tcccggctca ccatcacaag cagattttct tttgtttgct tttgcagggg aagactatgt 2341 gctaaaaggg ccatccaata tggctgctag ttatcaggga aatgaaaatt caccccttca 2401 gcctgctgag acaggctgtg ataaggcaat gactgacaac gcatctaatg aaaatcccat 2461 cccccttgca gtggagacta ttggttcatc aagagtggat ttcttttggg ataggtattt 2521 tcatgttgtg acaattccaa aagtgtccag cgtagaccca cagtacatta ggttgaacat 2581 ttcagatatt ctatttgatc cagtgatcag gcaatccttg catgccactt acctgagatg 2641 cggaatctcc gttgctgtga gggcaatgcc tgcaaatccc tccagcacag agtgcttgga 2701 tggcttgaca attaatatgc tttatgttcc accaggcagc tcatgggcca taaataaaat 2761 agaacagaca gtacccatag agcaagcaca agattcaacc gggaactacg cactgccctc 2821 tttcacatgg aaacccaatc agacacctgt gtttacttgc tccattcctt atgtgtcctt 2881 tacgacagtg ctgccaacgg catattcggg ttttgaaacg actttttcaa ttccaaagag 2941 gaacaatcag ataccacaag attttggatt tggattgctt attttgcggc catcaatgcc 3001 tccaacacga gaattggtga tatcagcatg ggtgaaattt aataatgtga ggctattttg 3061 tccacgccct gggatacatg atgaagcatc ctactcaaac aactccacct caattccagg 3121 gacagtgact ggtcgattat cagctgctat gacaaccctg tctctccaag gcccaggtgc 3181 cacaaacttt tctctcttga gacaagcagg agatgtcgaa gaaaatccag ggccttctct 3241 ttccaagttg tatcagattt taagagaccc agcagttgat gccctgtgtg aggcatatga 3301 tgagttaaag aaatttaagg aacaagcaac tactttgctg gattcttttt ctggagactc 3361 tgagaaccct tggttgaata aatttattaa atatctgggc tatgccattt tagcttggaa 3421 atctcttcat gatccaatga cagcggctgc tgtctgcttt ataattggaa gtgatgtgac 3481 agcatttgtt gtttccaaat tagccaaaca cttgaagaaa ttcgccaaga ctgatccacc 3541 accagtgccc aaacctagat cctgtaagaa ggaagggtgt tgctgtggca acaagcataa 3601 ctaccctgat gagctgaacc cattttcaga gagcggcttc tggagccggt ttaagaaagg 3661 ccatttccaa ggtccaatgc aagatgtgag ttctttaatc aacatcttga agggtgcaga 3721 gtggatatac caccagtttg agaaggtgat taaatggctt aaaacttgga gaactgctga 3781 atatgaagtt tcttctgact tccttcagac ccagatgaaa gattatccac attattacag 3841 gaaatataag gaatgtgcaa ataattacag acacccagat agaactgaag tggcaaacta 3901 cttcagaaaa atgagaaagt gtgccgctca tgttaatcca agattaatgg gcatgttccc 3961 tgaatttgat ccctcccctc ctgatcccac tcgccctgag ccagttgtgg tcgttttgcg 4021 cggcgcacct ggacaaggca agagtgtgtg ctctgagatg cttgctcgga tgctctccta 4081 tactctagtt ggtaaatcct cctattatgc attcaattca gccaccaaac attttgacgg 4141 ctataaacaa caagctgtca caataattga cgaccttgga caagacacct ctggtgaaga 4201 ttttcgactg ttttgccagc tagtgtccac cactgagtgc attgtgccta tggctgatct 4261 gcccgataaa gggatgcatt ttaagtctga gatacttatt gccaacacaa atttgccctc 4321 ctttaatccc attactgtgt ctgatcctgc tgccataaag agaaggattt tccttgacct 4381 tacagttgaa gcaaatcggg cttatgccaa gcccgatggg acacttgatc ttgttcgagc 4441 cctccaacca actggtagag aatcccagtc tccactgcta aggcaagatc acaacatcct 4501 ttattccgac tgtgttgctt tcaagcatgg caagcacacc ctgtcttttc tggaggtttt 4561 tgaaatgatc aagagagagt tacagagacg ccagaatgtt tctaattcct tgacaaatct 4621 ttttaccttc caagggccta gtgatgattc ctggtttacc accttttaca agaagtggaa 4681 tctgagagca aaagaaaact ctgaggaaaa attgatcctt gagcttatca ggtactgtca 4741 tggatctgat atgctaaagg aatactgtca gctggcagca gccaacaaag agaagaagac 4801 agactattgg aacatggtta gaataattga ggaaattctt gcagctttga ctttaatatt 4861 gtcccttatt tccatcatga tagtgatgta ccagcttttc ttccaagggc cctacgaagc 4921 tagtgcagta aaaccagcaa agccaaaaag gcaatccctt ctgaaacttg ttgagatgca 4981 agggccaaaa ggtcaagcca acatggaaat ggaaagaacc ttgatgaaga agaacattat 5041 tgagatgact tatgagaagc acaatgggaa atttcaaaca actactgtcc tgtttgtgcg 5101 tgatcggatt ttcctaatta atactcatat tttgacatca attaagaact tccactatga 5161 gaatactgag atcccagcag cttctgttca gaaagtgcag gccatatttg atggacatcc 5221 atccgatgta actgctgtcc agttcactgt gggccgacaa taccgggaca taacaaacaa 5281 cttcatcaat agtttaccaa atcctggaac acccatagtt gggctgatga agactgaagg 5341 cagcagctat atgtggtctg gtgagtgcct tccatttaag acaccaatga acacctatga 5401 aggttgtgtt ccacatgtgc ttccgtacaa agctgtgaca gcccatggct attgcggttc 5461 tgttatggtt gcagatgctg gagtttggaa aggcgtttgt ggtatccact ctttaggaga 5521 tggtactata ggcgcggcca ctgttctatc aagacaacac ctgcttaacc ttcttgaggg 5581 atttttggaa ttccaaggaa agatttatga tgtgcagaaa gctgattttg tgtacacacc 5641 taccaagacc tctttgaagc ccacatttgt gtgtgttgac ccaaaattag aaccagcagc 5701 cctttcacat catgatccaa gattaaagga tccagaaaat tttaaagctg ttatcctgtc 5761 taagcatgtg ggtgactcac tgcaactgcc atggggcatt cgatgggcct catacaagta 5821 tgcagagaag atacgcgcca tactgccacc agattttctt gagcctcttt ctataagaga 5881 agcagttgaa ggaattgatg gactggaccc aatggacatg gacaaatcac ccgggttgcc 5941 atatgttaag aaaggcctgc gccggactga cttgtggaac ccaaaaactg gacctacaat 6001 agagttgatg gctgagataa atcgctatct tgactacaac tatgacaaac atgtgtttct 6061 gacatttcta aaagatgaac tgagaccaaa agaaaaagtt caagctggga aaacccgcgt 6121 cattgatgtg gcagggtttg ggcatgcaat agttggccgg atgttattcg gtcggctatt 6181 tgccttcttt cacaagaacc ccggttggaa cacaggatca gctgttggag ttaacccaga 6241 tttggcctgg actcaaatct tttatacagc ccctagccgt aatatgctag ctatggacta 6301 ttctggattt gatgcctctc atacctctgg catgttttgc attttaaaac atttcctcac 6361 cactcttggt tatggaactt tgcagctatc ttatattgat tctttgtgct attctaagca 6421 ccactgggat gatgagactt accgccttga tggtggattg ccctcaggat gctcaggtac 6481 aacaatattt aacacaatta tgaacaacat tgttgcccgt gcggctgcta gctacgccgc 6541 cgaaggacct gttggcattc tctgttatgg tgatgacatt cttgtctcat ctcctgagaa 6601 atttccagtt tctgactggt tggagtttta ctccaagaca ccttacaaag tgactgcagc 6661 tgataagagt gaacaaattg actggcgtga catcactcag tgcacgttcc ttaaacgggg 6721 atttgtactg gatggtagtc ttgtgcgccc agttatggat gaacagcatt tggctgaatt 6781 gctaaaatgg gctagacctg gaacactgca agctaaatta ctgtctattg cccaattggc 6841 tttccatctt ccacgccagg cctatgaccg cctgatgctc ccgtttgagg aagccgggta 6901 tgaaataccc tgccatgagc gcctcaacga ggagtggcgt gaaatgttca tttgaatagc 6961 tacagttgtg agcagtttag tgattttctg cctgttgccc aagtagtttt agttggg //