LOCUS AF248485 4335 bp mRNA linear INV 09-NOV-2000 DEFINITION Strongylocentrotus purpuratus myosin VI mRNA, complete cds; alternatively spliced. ACCESSION AF248485 VERSION AF248485.1 KEYWORDS . SOURCE Strongylocentrotus purpuratus (purple sea urchin) ORGANISM Strongylocentrotus purpuratus Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus. REFERENCE 1 (bases 1 to 4335) AUTHORS Sirotkin,V., Seipel,S., Krendel,M. and Bonder,E.M. TITLE Characterization of sea urchin unconventional myosins and analysis of their patterns of expression during early embryogenesis JOURNAL Mol. Reprod. Dev. 57 (2), 111-126 (2000) PUBMED 10984411 REFERENCE 2 (bases 1 to 4335) AUTHORS Sirotkin,V.A., Seipel,S.A. and Bonder,E.M. TITLE Direct Submission JOURNAL Submitted (24-MAR-2000) Biological Sciences, Rutgers University, 135 Smith Hall, 101 Warren St., Newark, NJ 07102, USA FEATURES Location/Qualifiers source 1..4335 /organism="Strongylocentrotus purpuratus" /mol_type="mRNA" /db_xref="taxon:7668" /clone="A73; A51; E2" /cell_type="oocyte" CDS 192..3995 /note="alternatively spliced" /codon_start=1 /product="myosin VI" /protein_id="AAF72176.1" /translation="MFDENRKVWVPHLEHGFQLGRIIDIGVDGITVQPVDSGKAVSAS YDRVFPAEDDEAKVVDDNCSLMYLNEATLLNNLRLRYKKNSIYTYVANILIAVNPYKQ MGDLYTSSNIKKYQGKSLGTLPPHVFAIADKSYREMITSKQSQAIIVSGESGAGKTES TKYILRYLTESHGQSAGIIEQRIIEANPLLEAFGNAKTVRNNNSSRFGKFMEMHFGEK HDVVGGYVSHYLLEKPRVCWQNGEERNYHVFYYLCAGAPDDLRTKLRIQTPDDYQYLR NGITQYFAGKESQKQVKADRQSKMYKKKGALHDIQVDDYRGYQRVVDALRKIGLKPQE EYDILRIVACVLHLGNIAFTGNDSQEGGCGVSPDAQDSLKFVADLIKVDAKELEQSLT SRTMQARGTVIKVPLKKEQASNARDALAKAVYSHLFDHIVSRINECFPFKTSANFIGL LDIAGFEFFTLNSYEQFCINYCNEKLQQFFNLRVLKEEQELYERESLGVNTVNYVDNQ DCIDLVELKPNGILDLLDEESKLPKASANNFTHNVHQKHKTHFRLAIPRKSKLTAHRN LRDDEGILIKHFAGAVCYQTSEFIEKNNDALHASLEVVIRDCKDPFITSLFPKNDKEP SKGRGGQNVQKLAFDSVGNKFKVQLNQLMEKLRSTGSSFVRCIKPNGKMVDSLFEGGQ ILSQLQCSGMVTVLDLMQGGFPSRTQFLDLYNMYKQYMPPELVRLDPRLFCKALFHAL GLDENDYQFGLTKVFFRPGKFAEFDQMMKSDPEHLRILIKKVRRWLICTRWKRGQWGT LMVIKLKNKILYRCAALVKMQSTVRMFLAMRKHRPRYRSLKQVNTLSKELDKLAQVAK TVKDKVAQQQVAATSKALQDLIIKIKTTIMTRRQMEDAYLNLSNQMRKQLLDLINKKK AEDAEADRLRKIQEEMERERKRREEEERKRKAEQEERERKKLQEEEERKLKAEMEAKR LREEEELRIQLEEEQKKLAAERKQIEADRQKLEEMQRQAEEEQRRREEQERRDYELAQ RLSEEANSQVIAEESLVARAEATVVQAAAPTKSLDLTTWKYADLRDTINTSIDIALLS ACKEEFHRRLKVYHAWKMKNKKVAAGDKGGPERAPQSIFESAQQYNQLAPPPKATKAA PANQNIQRFFRVPFSVTGSTAQGQMPERGWWYAHFDGQWIARQMEVHPTKVPVLLVAG KDDENMCEMSLEETGLTRRPNAEIVEREFEEPWKRSGGQQYHMAAVRNKQARPTWATQ SLKAR" 3'UTR 3966..4335 BASE COUNT 1273 a 977 c 1141 g 944 t ORIGIN 1 gggagtacag ctgttgaagc cggtagaatt gctacaaatc gttcatgaca gtttgattgc 61 gaggacaagt tcatgagtcg tcacttccaa ttacagtttc aggctgctga aatcaaagta 121 catgttgaga tttcttgaac tgatcgtcgt cctataattt gatcatctgt ggaaggtcgt 181 agaaagcggc catgtttgat gagaatcgga aggtgtgggt ccctcatctg gagcatggct 241 tccagctggg gaggatcatt gacatcgggg tcgatggcat caccgtccag ccggtagact 301 caggcaaggc tgtgagtgca tcatatgata gggtttttcc agcagaagat gatgaagcaa 361 aagtagtgga tgataattgc tccttgatgt atctgaatga ggccacgtta ctcaacaacc 421 tccggctacg ctacaagaaa aattccatct acacatatgt ggccaacatc ctaatagctg 481 tgaacccata caaacagatg ggggatctct acacgtccag caacataaag aaataccaag 541 gaaagtccct cggcacacta ccgcctcatg tctttgctat agctgacaag tcataccgtg 601 agatgatcac gtccaaacag agtcaagcta tcatcgtgag cggagaatct ggagccggca 661 agacagagtc taccaagtat atactcaggt acctgacaga gtctcacgga cagagtgcag 721 ggatcataga gcagaggatc attgaggcta acccgctcct agaagccttt ggcaatgcca 781 agacagtcag gaacaacaac agcagtcgct ttggaaagtt tatggaaatg cactttggag 841 agaagcacga tgttgttgga ggctatgtat cccattatct actggagaaa ccacgagtct 901 gctggcagaa cggagaagag aggaactatc atgtattcta ttacctgtgt gccggtgctc 961 cagatgacct ccgcaccaag ctacgtatcc agacccccga tgattatcag tacttacgga 1021 atggcatcac tcagtacttt gctggcaaag aatcacagaa gcaagtgaaa gcagacaggc 1081 agagcaaaat gtataagaag aagggtgcgc tgcatgacat ccaggtggat gattaccgtg 1141 gttaccagag agtggtggat gcactccgga agattggtct caaaccccag gaggagtatg 1201 acatcctgcg tatcgtggcg tgtgtcctac atcttggtaa catcgcattc accggcaatg 1261 acagccagga gggtggctgt ggcgtatcac ctgatgccca ggattccctc aagtttgtag 1321 cagatctcat caaggtggat gccaaggaac tggaacaatc tctaacatct cgtaccatgc 1381 aggctagggg tacagtcatc aaagtgccgt tgaagaaaga gcaagcgtcc aatgctcgcg 1441 atgccctggc caaggctgtc tactctcatc tctttgatca cattgtatcc cgcatcaacg 1501 agtgcttccc tttcaagacc tcggcaaact tcatcggctt gctggacatc gcaggatttg 1561 aattcttcac cctcaacagc tacgagcagt tctgcatcaa ctactgtaac gagaagctac 1621 aacagttctt caatcttagg gtgctcaagg aggaacaaga actttatgag agggagagtc 1681 tgggtgtaaa cacagtcaac tatgtggata accaagattg tatcgatctg gttgaactca 1741 agcccaatgg tatcctagat ctactggacg aggagagtaa gctacccaaa gccagcgcca 1801 acaacttcac tcacaatgtg catcagaaac ataaaactca cttcaggttg gctatccctc 1861 gtaaatccaa gttgacagct catcgtaacc tccgagatga tgaaggaatc cttataaagc 1921 actttgccgg ggctgtgtgc tatcaaacta gtgaattcat agagaagaac aacgatgctc 1981 tgcatgcatc tctggaggtt gttatacgag actgcaagga tcctttcatc accagcctct 2041 tccctaagaa tgacaaggaa ccgtccaagg gacgcggagg acagaacgtc cagaaattgg 2101 ccttcgacag tgtgggaaat aagttcaagg tacaactcaa ccagttaatg gagaagcttc 2161 gaagcactgg atcctccttc gtacgttgca tcaaacccaa tggcaagatg gtggacagtc 2221 tgtttgaagg gggacagatc ctcagccagc tacagtgctc aggaatggtg actgtactgg 2281 atctgatgca gggaggtttt ccatcccgaa cacagttctt agatctgtat aacatgtaca 2341 agcagtacat gccaccagag ctggtccgtc tagatccaag gctattctgt aaggccctct 2401 tccatgcact cggactggac gagaacgact accagttcgg tctgaccaag gtgttcttca 2461 gaccaggcaa gtttgctgag tttgatcaga tgatgaagtc cgatccagag cacctgagga 2521 tcctgatcaa gaaggtccgg cgctggctca tctgcacacg ctggaagcga ggacagtggg 2581 gtaccttgat ggtcatcaag ttgaagaaca agatcttgta ccgttgcgct gcccttgtca 2641 agatgcagag tactgtgagg atgttcctag cgatgcgcaa gcacagaccc aggtacagga 2701 gcctcaagca agttaataca cttagcaagg agctcgacaa gctggcacaa gttgccaaga 2761 cagtcaagga caaggttgcc caacaacaag ttgctgccac cagcaaggct ctacaggatc 2821 ttattattaa gattaagacc acgatcatga ccagaagaca gatggaggat gcgtacctca 2881 acctctctaa ccagatgagg aagcagctcc tggacctgat caacaagaag aaggcagagg 2941 atgcagaggc agacagactg cggaagatac aggaggagat ggagagggag aggaagagac 3001 gagaagagga ggagaggaag aggaaggcag agcaggagga gagagagaga aagaagttgc 3061 aggaggagga agagaggaaa ctgaaagcag agatggaagc taaacgccta cgagaagaag 3121 aggagcttcg tattcaactt gaagaagaac agaagaaatt agccgcggag agaaagcaga 3181 tagaagcaga ccgacagaag ctggaagaga tgcagagaca agcggaagaa gaacaacgta 3241 gaagggagga gcaggaacgc cgtgactatg aattagccca gcgtctctcg gaggaagcta 3301 attctcaggt tatcgcagag gaatctcttg tagctcgtgc cgaggctacc gttgtccaag 3361 ccgccgctcc aaccaaatcc cttgatctga caacatggaa gtatgctgat ctcagagaca 3421 ctattaacac ctcaatcgat attgcgctcc tgtcagcctg caaggaggag ttccatcgtc 3481 gtctcaaggt ctaccacgcc tggaagatga agaataagaa ggttgccgcc ggcgacaagg 3541 gcggaccaga gagggctcca caatccatct ttgaaagtgc ccaacaatac aaccagctgg 3601 caccccctcc gaaagccacc aaggctgccc cagccaatca gaacatccaa cgcttcttca 3661 gggtgccttt ctctgtgact gggtccaccg ctcagggtca gatgcccgag aggggttggt 3721 ggtatgccca ctttgacggt cagtggatcg cccgccagat ggaggtacac cccaccaagg 3781 tccccgttct tctggttgca ggtaaagatg atgagaacat gtgtgagatg agtttggagg 3841 agactgggtt gacacgacgt cccaacgccg agatcgtcga gcgtgagttt gaggagccct 3901 ggaagcgtag cggcggtcag cagtaccaca tggctgcagt acgcaacaag caggctagac 3961 caacgtgggc cacgcagagc ttgaaagctc gttgatggta gactaactcc tagggagaat 4021 gaatgaagaa aattcaaatg cctttgtgta tgtggaacct aaatgtacac tctgcttcat 4081 aagccttgta atgtattgaa attataccgt tatcaaaatt tagtgcattt ttgcagtgaa 4141 ccaaaaggaa gttgtctgca gtagacttta gagtttgaca ccaagaaact tgtcttgttg 4201 tagaaaagtt atatttcatg aaataacaat gtaattttgt gagtgagaat tagatcagct 4261 gtgaattttg tggatctagc tcactagttc gggagcagtg gtgaaacaag atgaaccttg 4321 cagtggagtt gggtt //