LOCUS AH008174 5778 bp DNA linear HUM 10-JUN-2016 DEFINITION Homo sapiens chromosome 20 small nuclear ribonucleoprotein (SNRPB) gene, complete cds, alternatively spliced. ACCESSION AH008174 AF134822 AF134823 AF134824 AF134825 VERSION AH008174.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5778) AUTHORS Gray,T.A., Smithwick,M.J., Schaldach,M.A., Martone,D.L., Graves,J.A., McCarrey,J.R. and Nicholls,R.D. TITLE Concerted regulation and molecular evolution of the duplicated SNRPB'/B and SNRPN loci JOURNAL Nucleic Acids Res. 27 (23), 4577-4584 (1999) PUBMED 10556313 REFERENCE 2 (bases 1 to 5778) AUTHORS Gray,T.A. and Nicholls,R.D. TITLE Direct Submission JOURNAL Submitted (15-MAR-1999) Genetics, Case Western Reserve University, 2109 Adelbert Road, Cleveland, OH 44106-4955, USA COMMENT On or before Jun 10, 2016 this sequence version replaced AF134822.1, AF134823.1, AF134824.1, AF134825.1, AH008174.1. FEATURES Location/Qualifiers source 1..5778 /organism="Homo sapiens" /mol_type="genomic DNA" /db_xref="taxon:9606" /chromosome="20" /map="20p13" gene 764..5685 /gene="SNRPB" mRNA join(764..848,1578..1729,2631..2752,3427..3579,4100..4238, 4567..4691,5388..5685) /gene="SNRPB" /product="small nuclear ribonucleoprotein B" mRNA join(764..848,1578..1729,2631..2752,3427..3579,4100..4238, 4567..4691,5534..5685) /gene="SNRPB" /product="small nuclear ribonucleoprotein B'" /note="alternatively spliced" exon 764..848 /gene="SNRPB" /number=1 CDS join(846..848,1578..1729,2631..2752,3427..3579,4100..4238, 4567..4691,5534..5571) /gene="SNRPB" /note="alternatively spliced" /codon_start=1 /product="small nuclear ribonucleoprotein B'" /protein_id="AAD54489.1" /translation="MTVGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCD CDEFRKIKPKNSKQAEREEKRVLGLVLLRGENLVSMTVEGPPPKDVSQNWYCSSSTCW SCRGPRDRQGCWQRNPSWGSHAPGSCRTCWASPWGWRAIPTGDDPTRKRYCCSRCSCC HSQYCRGSNPVPTWPWGSSPTYGPRSTPSRHDGPTSWYETSYGSPNGIPPGRGTPMGM PPPGMRPPPPGMRGPPPPGMRPPRP" CDS join(846..848,1578..1729,2631..2752,3427..3579,4100..4238, 4567..4691,5388..5398) /gene="SNRPB" /codon_start=1 /product="small nuclear ribonucleoprotein B" /protein_id="AAD54488.1" /translation="MTVGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCD CDEFRKIKPKNSKQAEREEKRVLGLVLLRGENLVSMTVEGPPPKDVSQNWYCSSSTCW SCRGPRDRQGCWQRNPSWGSHAPGSCRTCWASPWGWRAIPTGDDPTRKRYCCSRCSCC HSQYCRGSNPVPTWPWGSSPTYGPRSTPSRHDGPTSWYETSYGSPNGIPPGRGTPMGM PPPGMRPPPPGMRGLL" gap 1282..1381 /estimated_length=unknown exon 1578..1729 /gene="SNRPB" /number=2 gap 2156..2255 /estimated_length=unknown exon 2631..2752 /gene="SNRPB" /number=3 gap 2861..2960 /estimated_length=unknown exon 3427..3579 /gene="SNRPB" /number=4 exon 4100..4238 /gene="SNRPB" /number=5 exon 4567..4691 /gene="SNRPB" /number=6 exon 5388..5685 /gene="SNRPB" /number=7 regulatory 5463..5468 /regulatory_class="polyA_signal_sequence" /gene="SNRPB" exon 5534..5685 /gene="SNRPB" /note="alternatively spliced" /number=8 BASE COUNT 1355 a 1154 c 1553 g 1416 t ORIGIN 1 ttgtctcaaa agaaaaaaaa aagtcataga aaaaaaataa atgtcatacg actggatgcg 61 attatcagca aatatgggta gagcccttat tttgtgctaa agtgttctag gcactacagc 121 aatgagtaat acacaaagag aaaaattcac acccttatgg atcttacatt ctaatgggga 181 ggggataata aaataactaa caaaaatata cagcgtgtta gatagcaaga gggaaataca 241 ggagagatga ggatgaggtg ggtgggaagg ttacaggatg gctagggaaa tcctcactgg 301 gaaaatgtta tttaagctta aaccttgaaa gagttgaggg cagcagcctt ctggtatacc 361 ctggggacta ccattccagg cagaggcgaa agcaaatgca gaggggctga aaaaggagca 421 cgtccagcca gtggagtgaa aagcaagaat agtgactgta gaggagagag ccggggaggg 481 tgatgggaaa tgaggaccga gaggttaatg ggaaaggcgg ggtgaagaga aatgagtgtg 541 acacagagca gctctcagta cggatttaag ctaggaaggt gtccaaacag gaacttaagg 601 ctctccttac gtcaaagccg gatgttaacg cccagtcccc aggccccgcc tctgctcggc 661 agaagctccg ctccggggtc ggaactccag ggctagtgag ctggaccgga agtaggtttc 721 tacccgaccg cattttacgt ggtgctgcat ttccggtagc ggcggcggga aatcggctgt 781 gggagagagg ctaggcctct gaggaggcga atccggcggg tatcagagcc atcagaaccg 841 ccaccatggt aaggagggca caggctggcg gcgcgggagc ttccgagtct gttgtggagt 901 gggaaccgcg actgatcggg gatgaagccg tgggttggag ccacttaggc cggtaaggcc 961 tggtccgagc ccgctcggtc tgggcgggaa agaccaggac cttggcggtt cggctaggca 1021 tggggtcgag gaaaaggttg gaaccggtgt cgcaggccga ggtcgctcgg caggggcgag 1081 ggtagaaccg cggctctcgt acaccgctgt agccataatt cctgggaccc agtaggcact 1141 aagttaactt ttgccgaata aatatatgtc ccgggcttcg gagcaggcac tggagccgca 1201 gggggacccg gtaaaaggct cagactgcga aagtttgtga gtctgagaaa gagttggcgg 1261 aagtgggtgg aaggggctcg tnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1321 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1381 nttcctgggt agaggtaagg gctaaaacgg tggcatggga gaattcctag gaaaaggctg 1441 tgggtgggag actgagctaa gaatctgttg agaaagttgg acacatggac aagaacgcca 1501 tgggaagttt tggggagggc cagaggtgct tgggtccaaa agagcagagt ctcatccctg 1561 tccatttctc cttgcagacg gtgggcaaga gcagcaagat gctgcagcat attgattaca 1621 ggatgaggtg catcctgcag gacggccgga tcttcattgg caccttcaag gcttttgaca 1681 agcacatgaa tttgatcctc tgtgactgtg atgagttcag aaagatcaag tgaggagtgg 1741 actgtggggg gcggagactg gaggatggga atggattgag tgggtgggcc aagcaataga 1801 ggtggtgatg tagctagttg gttcttctct gtttattctc cagttttaga gggcagactt 1861 aaatggggac attgaacgct aagaaatctt tttgagtcca gcaaaccttg ctctctagtc 1921 tagcaaagta caagttgtga agggctgcta ggctttttgt ttctctcact ttgcgtgccc 1981 ctgggtactg gggtaaaggg ctctcatgtt ctccccacag gtgtgtgagg ggggagagct 2041 tgagtttctg gcctcattgc ctatttgtaa agctgtagcc taaagggctc tcccaatgca 2101 acctggtctg aaactgcttt aagaagcctc tgacctcttc aaggtaaagt gctcannnnn 2161 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2221 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnngaatt gtttaggcag cctcctgatg 2281 ttggcaagac cttaagctga agggagggaa tagggtccta agaaagaaga cttggctgag 2341 ggaagggcct tcacggttgc tgtggaatag catttgggcc cgggctgggc tttgttgacc 2401 ttgtcctatc tcttggtcag tgtgtcctct tggcatggta ggaaacaggt agatagccac 2461 ctaagaggtt atgtgttcag cctgtagaga ctatccagga gggctatctt gggaaagttt 2521 gtgtactgtt tgttaggaga tgcagtataa gcaaatcttg gaggccacta ggcaggtgaa 2581 ctttacccac ctctaacact ttttttgttc cttcttaaac ctctctttag gccaaagaac 2641 tccaaacaag cagaaaggga agagaagcga gtcctcggtc tggtgctgct gcgaggggag 2701 aatctggtct caatgacagt agagggacct cctcccaaag atgtaagtca gagcaggaag 2761 ccttgtggag gaggggaggc cctactgtga gccaggctct gtgttagatt ctgtttcatt 2821 gcagttctca caggcatcct ctggattttg cccccttttt nnnnnnnnnn nnnnnnnnnn 2881 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2941 nnnnnnnnnn nnnnnnnnnn cataacccat cataaacctt tgtgatcaca accagttgta 3001 ccataaccat gtcatttgca gataaggcaa ctcagcccgg gattgtggga ttatttgtcc 3061 attgtcacct agcggattag aatcagctgg gaatggatct catgtccctt taatgccttg 3121 cctgctgaac cctgagtgga accctggccc tttgctcttg gtttaacttt cacaggagtg 3181 catataggtg gttgagttgt ggcatgtttc tctagactta ctcttaagtt ctaccctgct 3241 tcagggataa ctcatagtct tggatggagg aagaatggtg ttggcacaca tggagaggta 3301 gtatttataa gctatttcga tagtatttat aagctatttc gaggggctct cttggcaatg 3361 atattccaaa gtatacttct gatcttcaga tcactgggca tcagagcata tttgtttatt 3421 tttcagactg gtattgctcg agttccactt gctggagctg ccgggggccc agggatcggc 3481 agggctgctg gcagaggaat cccagctggg gttcccatgc cccaggctcc tgcaggactt 3541 gctgggccag tccgtggggt tggcgggcca tcccaacagg tgaggagttg gggaaagggt 3601 accacctcct gggtggctaa aataaaggat aaaggggagg gtccatagtt ttaaaagggt 3661 ccagagtgac caacctgtga ttgtcagact atcagtgttt cactgtggtt tatacatggc 3721 cctagaagca agtgaaaagg ataagttgcc attgtaaatt atgttgatgc tattaaagag 3781 atgtacgaat tagccaactg tatttaagga aaatatttcc atgacagcat ttgaaatcat 3841 gagtcatatt tgaaaatgca gttgccttct ctcacttgga ttggacatgc ttacattcag 3901 gtctagaaga tgggagttgg gcattcaagc ttgatctttc ccgacatgtg gttttggatg 3961 ggaagtctgg tgctgagagt tgtagcatta agggatttgg tgtctgttat ttcccactgt 4021 ccttccccaa gttggggagg agagtgggaa gctgcattgt actgtactct tctaactctt 4081 tcttcttatg tcctcttagg tgatgacccc acaaggaaga ggtactgttg cagccgctgc 4141 agctgctgcc acagccagta ttgccggggc tccaacccag tacccacctg gccgtggggg 4201 tcctccccca cctatgggcc gaggagcacc ccctccaggt gaggagccca taaggagacc 4261 aggtgctaat tgatagaaga tgccttagct ggattaatga tgagatataa ccttgactga 4321 agctgatgat gagtttgtat aattaagcag gattactctg agatccagcg tggctgactg 4381 atgagactag gtggacaaga gccattggga gccctgggtg ttaggctcaa atgtcagttt 4441 tctgggagct gctgagaggg tggaatggtc catctatctc agaacttggt ggaaagcttt 4501 gtagtttttt tgctaccttt tcaagataga cacttgagct atattcttgg ggcttttctc 4561 ttgcaggcat gatgggccca cctcctggta tgagacctcc tatgggtccc ccaatgggat 4621 cccccctgga agagggactc caatgggcat gccccctccg ggaatgcggc ctcctccccc 4681 tgggatgcga ggtaagtgcc tgcagtggtg actttggctt ctttccctag agcctagtgg 4741 gataggaaat ggagggaaga ttgcatttag atcatatccc atgggctttc aagccttaaa 4801 tctagggaaa tccagaaagg aaagagaaga gggaacattt cttaaattgg gcttacctcc 4861 cctcttagaa aagttagagc agccatgcac ccagggtgtt tctcaatatc taaggcagcg 4921 gcctcaggac acaatgaaat aatgcattct gaggatccct aatagaagtt atgagattgt 4981 cttatgctct ttggtttgac agtccccagt aattaagagg gggctctggg ctttgctgta 5041 ctattatgga tttctcttta acttcagttg gagaaattct gagatcagtc cccacatgga 5101 tgagaaatta ggcccccagg gagtttgact ccaaagccca gtgttctttc cctataagat 5161 aacccatggg caaacttggt gacccctgtt tctctagtct ggattattcc tctatgggtt 5221 tttatagaca taggaaccca gtcagcctca gagtagtccc tagttagcac atatgccatg 5281 tatacccctc tcctcactcg attactgcag ggcgtgggag gctggggcag ggttggggat 5341 tcaagttgca gatcaggcac tgactaaact tcttactctt acttcaggcc ttctttgacc 5401 cttggccaca gagtatggaa gtagctccgc agaggcgtgg gctcgattcc tcagggccac 5461 gttaacacag acctgtttgt ttcttatgct gttgttcgtg gagtctcatg ggattgtctg 5521 gtttccctta cagggccccc tcccccggga atgcgcccac caaggcccta gactcatctt 5581 ggccctcctc agctccctgc ctgtttcccg taaggctgta catagtcctt ttatctcctt 5641 gtggcctatg aaactggttt agaataaact cttaagagaa cattataatt gcacctatgt 5701 atctttattt ttagaaaaat ctttgatata ttgggtgcta atatagtcaa gaagggttgc 5761 cttggaaaaa attaaccc //