LOCUS       AF132044                1114 bp    mRNA    linear   ROD 09-NOV-1999
DEFINITION  Sciurus carolinensis green opsin mRNA, complete cds.
ACCESSION   AF132044
VERSION     AF132044.1
KEYWORDS    .
SOURCE      Sciurus carolinensis (gray squirrel)
  ORGANISM  Sciurus carolinensis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia;
            Sciuromorpha; Sciuridae; Sciurinae; Sciurini; Sciurus.
REFERENCE   1  (bases 1 to 1114)
  AUTHORS   Yokoyama,S. and Radlwimmer,F.B.
  TITLE     The molecular genetics of red and green color vision in mammals
  JOURNAL   Genetics 153 (2), 919-932 (1999)
   PUBMED   10511567
REFERENCE   2  (bases 1 to 1114)
  AUTHORS   Yokoyama,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-MAR-1999) Department of Biology, Syracuse University,
            130 College Place, Syracuse, NY 13244, USA
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Sciurus carolinensis"
                     /mol_type="mRNA"
                     /db_xref="taxon:30640"
     CDS             15..1109
                     /codon_start=1
                     /product="green opsin"
                     /protein_id="AAD30525.1"
                     /translation="MAQRWDPQRLAGGQPQDSHEDSTQSSIFTYTNSNATRGPFEGPN
                     YHIAPRWVYHITSTWMIIVVIASVFTNGLVLVATMKFKKLRHPLNWILVNLAIADLAE
                     TVIASTISVVNQLYGYFVLGHPLCVVEGYTVSVCGITGLWSLAIISWERWLVVCKPFG
                     NMRFDAKLAIVGIAFSWIWSAVWTAPPIFGWSRYWPYGLKTSCGPDVFSGTSYPGVQS
                     YMMVLMVTCCIIPLSIIILCYLQVWLAIRAVAKQQKESESTQKAEKEVTRMVVVMVFA
                     YCLCWGPYTFFACFATANPGYAFHPLVAALPAYFAKSATIYNPIIYVFMNRQFRNCIL
                     QLFGKKVDDTSELSSASKTEASSVSSVSPA"
BASE COUNT          235 a          322 c          278 g          279 t
ORIGIN      
        1 ggctttgcag agccatggcc cagcggtggg acccccaaag gcttgcaggt gggcagccac
       61 aagacagcca tgaagacagc acccagtcga gcatcttcac ctataccaac agcaacgcca
      121 ccagaggccc ctttgaaggc cccaattacc acattgctcc cagatgggtg taccacatca
      181 ccagcacctg gatgatcatt gtggttatcg catctgtctt cactaatggg cttgtgctgg
      241 tggccaccat gaagttcaag aagctacgcc accctctgaa ctggatcctg gtgaacttgg
      301 caattgctga cctagcagaa accgtcattg ccagtaccat cagtgttgtg aaccagctct
      361 acggctactt cgtgctgggc caccctctgt gtgttgtgga gggctacact gtctccgtgt
      421 gtgggatcac aggcctctgg tccctggcca tcatttcctg ggagaggtgg ctagtggtct
      481 gcaaaccctt tggcaatatg agatttgatg ccaagctggc tattgtgggc attgccttct
      541 cctggatctg gtctgctgtg tggacagccc cacccatctt tggttggagc aggtactggc
      601 cctatggcct gaagacgtcc tgtggcccag atgtattcag tggcacctcg taccctgggg
      661 tgcagtctta catgatggtc ctcatggtca cctgctgcat catcccactc agcatcatca
      721 tcctctgcta cctccaagtg tggctggcca tccgagcagt ggcaaagcag cagaaagaat
      781 ccgagtccac ccagaaggct gagaaggaag tgacgcgcat ggtggtggtg atggtctttg
      841 catactgcct ctgctggggc ccctacacct tctttgcatg ctttgctact gccaaccctg
      901 gctatgcctt ccaccctctg gtggctgccc taccagccta ctttgccaaa agtgccacta
      961 tctacaatcc cattatctac gtctttatga acaggcagtt tagaaactgt atcttgcagc
     1021 tttttggaaa gaaggttgat gatacctctg aactctccag cgcctccaaa acagaggctt
     1081 catctgtctc ttcagtgtct cctgcatgaa gtca
//