LOCUS AF079406 2718 bp DNA linear BCT 26-JUL-2016 DEFINITION Vibrio cholerae single strand DNA-binding protein (ssb) gene, partial cds; and hypothetical protein YhdA (yhdA) gene, complete cds. ACCESSION AF079406 VERSION AF079406.1 KEYWORDS . SOURCE Vibrio cholerae C6706 ORGANISM Vibrio cholerae C6706 Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 (bases 1 to 2718) AUTHORS Marsh,J.W. and Taylor,R.K. TITLE Genetic and transcriptional analyses of the Vibrio cholerae mannose-sensitive hemagglutinin type 4 pilus gene locus JOURNAL J. Bacteriol. 181 (4), 1110-1117 (1999) PUBMED 9973335 REFERENCE 2 (bases 1 to 2718) AUTHORS Marsh,J.W. and Taylor,R.K. TITLE Direct Submission JOURNAL Submitted (21-JUL-1998) Microbiology, Dartmouth Medical School, Hanover, NH 03755, USA FEATURES Location/Qualifiers source 1..2718 /organism="Vibrio cholerae C6706" /mol_type="genomic DNA" /strain="C6706" /db_xref="taxon:948564" /note="biotype: El Tor" gene <1..579 /gene="ssb" CDS <1..579 /gene="ssb" /note="carboxy terminal amino acid sequence; SSB" /codon_start=1 /transl_table=11 /product="single strand DNA-binding protein" /protein_id="AAC72352.1" /translation="RLLQIDRHDLITEQNMASRGVNKVILIGNLGQDPEVRYMPSGGA VANITIATSETWRDKATGEQKEKTEWHRVTLYGKLAEVAGEYLRKGSQVYIEGQLQTR KWQDQSGQDRYSTEVVVQGYNGIMQMLGGRAQQGGMPAQGGMNVPAQQGSWGQPQQPA KQHQPMQQSAPQQYSQPQYNEPPMDFDDDIPF" gene 703..2718 /gene="yhdA" CDS 703..2718 /gene="yhdA" /codon_start=1 /transl_table=11 /product="hypothetical protein YhdA" /protein_id="AAC72353.1" /translation="MRYTPTLKLSTRLVAFVTMTVISAMFILFLGGTLSFQRLGQEYL NHYLQGIVEVVDKEMEDPDAAYSMQRWMPKMLQASGIIEMQLTSEAGPIYRFKDTTNT IEASRLHQVALPLKRNPGYVMHFKAVPPYLNYNYSLQAMWSTTLAVLLIVFFLIRGLK WLKEQLLGSELLEERGRMILAGRVEQHAKGDPREWPFTASEALDRLIEELQDARQERS RFDTFIGSQTFLDQLTGTANRVLYDSKLESALLESGAHGGVMMLRVDDLESAREESPK RTLDEFIIEVGECLSNIVQRYPDAILSRYYEDVFALFIPHQGSKDIAQVATQAIKLIE RINPPEPLPEDNWFHIGVTMYQEGERRGRIIDEMETALKSAQLQGVNAWSRFQKPKQL QEDRGSVRWRTLFEQVLRPEEILLYRQACYRISANGEREFLHYELFARIQDPQQQGIL KASRFSSALETVGYEAMLDRAVFSSVVSFLKRSELVEPLSVNLHVVPFNDKRYARWIR NELMQMPFSLRTALSFEFSEAHLVNHLDYMRPIIRMLAGLGCKIVVGQAGRTIVSTHY IKDLKVNYLKLHRSLIKKIDQRHENQLFVRSLVGVCGGTQAEVVAVGVETTQEWQTLQ MLGVSGVQGRLFDEEQQMLPPLPPEPLKRPPRLSVKPIGKRNRWRTK" BASE COUNT 720 a 598 c 710 g 690 t ORIGIN 1 cgattacttc aaattgatag acatgacttg attacggagc aaaacatggc aagccgtggc 61 gtgaacaaag taattttgat tggtaactta ggccaagatc ctgaagtgcg ttatatgcca 121 agcggcggcg cagtagcgaa tatcaccatc gcgacctccg aaacctggcg tgataaagcc 181 acaggtgaac agaaggaaaa aaccgaatgg caccgagtta ctctgtatgg aaaattggca 241 gaagtggctg gtgaatattt gcgtaaaggt tctcaagttt acattgaagg ccaactgcaa 301 acgcgtaagt ggcaagatca aagtggtcaa gatcgctact caaccgaagt ggttgtacaa 361 ggctataacg gtatcatgca gatgctgggt ggacgtgcac agcaaggtgg aatgccagcc 421 caaggcggca tgaatgttcc tgcgcagcaa ggaagttggg gacaaccaca acaaccggcg 481 aagcagcatc agcctatgca acaatctgcg cctcaacagt actcgcaacc gcagtataat 541 gagccgccga tggattttga tgacgacatc ccgttttagt attgtaattg acgaaaaaag 601 ccgcggattc cgcggctttt ttatatagtt atctcaattg tttaatgtac acttctcgcc 661 tctgaatgat aggtagcggc gcacataagg aacgtggcac aaatgaggta tacaccgaca 721 ttaaaactga gcactcggtt agtggcgttc gtcactatga cggtgatcag tgccatgttt 781 atcctgttcc ttggtggcac cttatctttt cagcgtttgg ggcaggaata cctcaaccac 841 tatctacaag ggatagttga ggttgtcgat aaggagatgg aagatccaga cgccgcttac 901 tctatgcagc gttggatgcc caaaatgctt caagcgagtg gcatcattga aatgcagctt 961 acttccgaag cgggccccat ctaccgtttt aaagacacca ccaacaccat tgaagcttca 1021 cgtttgcatc aagtcgcttt accgctcaaa cgtaatcccg gttatgtgat gcattttaaa 1081 gcggtgcctc cctacctcaa ttacaactat tcactgcaag ccatgtggtc gaccacctta 1141 gcggtgctac tgatcgtatt tttcttgatc cgcggtctga aatggttgaa agagcaacta 1201 ctaggatcgg agttactgga agagcgagga cggatgattc ttgctggacg agtggagcaa 1261 catgccaagg gggatccgcg agagtggcct ttcaccgcaa gtgaagcctt agatcgcttg 1321 attgaagagt tgcaagatgc ccgtcaagaa cgtagccgtt ttgatacctt tattggtagc 1381 caaaccttcc tcgatcaact gaccgggacg gcgaatcggg tgttgtatga cagtaagctg 1441 gaatcggctt tactggagag tggcgctcac ggcggcgtta tgatgctgcg ggtcgatgac 1501 ttagagtcag cgcgagaaga gagccctaaa cgtacgctcg atgagtttat cattgaggtg 1561 ggggagtgtt tatccaacat agtacagcgt tatccggatg ccatactttc tcgctactat 1621 gaggatgtgt ttgcgctgtt tattcctcat cagggtagta aagatattgc tcaagtagcg 1681 acacaggcga ttaagttgat tgagcgcatc aatccccctg agccactgcc agaagacaat 1741 tggttccaca ttggtgtaac catgtatcaa gaaggtgagc ggcgtggacg gattattgat 1801 gagatggaaa ccgcgctcaa aagtgctcaa ctgcaagggg tgaatgcgtg gagccgtttt 1861 caaaaaccta aacagttaca agaggatcgc ggtagcgttc ggtggcgtac attgtttgaa 1921 caggtgcttc gtccggaaga gattttgctc tatcgccaag cctgttatcg tatttctgct 1981 aatggagagc gggagttcct acattatgag ttatttgcgc gtattcagga tccgcaacaa 2041 caaggcattc tcaaagcgtc gcgttttagc tcagctttag aaacggtcgg ctatgaagcc 2101 atgttggatc gtgccgtatt cagctctgtc gtgagttttt tgaagcgctc tgaactggtt 2161 gaaccactct cggtaaactt gcacgttgtt ccatttaacg ataaacggta tgctcgctgg 2221 attcgcaacg aattgatgca gatgcctttt tctcttagaa cggcgctctc ttttgagttt 2281 tcagaagcgc atttggtcaa ccatttagac tatatgcgcc ccatcattcg catgttggcg 2341 gggctgggtt gcaagatagt ggtgggacaa gcgggacgaa caattgtcag cacgcactat 2401 atcaaagact taaaagtcaa ctatcttaaa cttcatcgga gtttgataaa gaaaattgac 2461 caacgccatg aaaatcagct gttcgttcgc agtttggtag gtgtatgtgg cggtacccaa 2521 gcagaagtgg ttgcggttgg ggttgaaact actcaagagt ggcaaacctt acagatgctg 2581 ggtgtcagtg gtgtgcaagg tcgcttgttt gatgaggagc aacagatgtt gcctcctttg 2641 ccaccagagc cattgaaacg ccccccgcgt ctctctgtaa agcccatcgg caaacgtaat 2701 cgatggcgaa ccaaatag //