LOCUS AH005530 6694 bp DNA linear ROD 28-JUL-2016 DEFINITION Rattus norvegicus strain Fischer 344 hypoxanthine guanine phosphoribosyl transferase (hprt) gene, complete cds. ACCESSION AH005530 AF001278 AF001279 AF001280 AF001281 AF001282 AF009655 AF009656 U48799 VERSION AH005530.2 KEYWORDS . SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1080 to 1732; 1833 to 2306) AUTHORS Mittelstaedt,R.A., Smith,B.A. and Heflich,R.H. TITLE Analysis of in vivo mutation induced by N-ethyl-N-nitrosourea in the hprt gene of rat lymphocytes JOURNAL Environ. Mol. Mutagen. 26 (4), 261-269 (1995) PUBMED 8575415 REFERENCE 2 (bases 1 to 6694) AUTHORS Chen,T., Mittelstaedt,R.A. and Heflich,R.H. TITLE DNA sequence flanking the protein coding regions of the rat Hprt gene JOURNAL Mutat. Res. 382 (3-4), 79-80 (1998) PUBMED 9691986 REFERENCE 3 (bases 1 to 979; 2407 to 3000; 3101 to 3552; 3653 to 4150; 4251 to 6694) AUTHORS Chen,T., Mittelstaeat,R.A. and Heflich,R.H. TITLE Direct Submission JOURNAL Submitted (07-JUL-1995) Division of Genetic Toxicology, National Center for Toxicological Research, 3900 NCTR Rd., Jefferson, AR 72079, USA REFERENCE 4 (bases 1080 to 1732) AUTHORS Heflich,R.H., Mittelstaedt,R.A., Manjanatha,M.G., Lyn-Cook,L.E. and Aidoo,A. TITLE Direct Submission JOURNAL Submitted (07-JUL-1995) Division of Genetic Toxicology, National Center for Toxicological Research, 3900 NCTR Rd., Jefferson, AR 72079, USA REFERENCE 5 (bases 1833 to 2306) AUTHORS Mittelstaedt,R.A. TITLE Direct Submission JOURNAL Submitted (07-JUL-1995) Division of Genetic Toxicology, National Center for Toxicological Research, 3900 NCTR Rd, Jefferson, AR 72079, USA COMMENT On or before Apr 6, 2016 this sequence version replaced AF001278.1, AF009655.1, AF009656.1, AF001279.1, AF001280.1, AF001281.1, AF001282.1, AH005530.1. FEATURES Location/Qualifiers source 1..6694 /organism="Rattus norvegicus" /mol_type="genomic DNA" /strain="Fischer 344" /db_xref="taxon:10116" /chromosome="X" /cell_type="lymphocyte" /tissue_type="spleen" gene 1..6097 /gene="hprt" regulatory 1..648 /regulatory_class="promoter" /gene="hprt" mRNA join(649..701,1354..1460,1958..2141,2698..2763,3315..3332, 3843..3925,4628..4674,4845..4921,5599..6097) /gene="hprt" /product="hypoxanthine guanine phosphoribosyl transferase" exon 649..701 /gene="hprt" /number=1 CDS join(675..701,1354..1460,1958..2141,2698..2763,3315..3332, 3843..3925,4628..4674,4845..4921,5599..5646) /gene="hprt" /codon_start=1 /product="hypoxanthine guanine phosphoribosyl transferase" /protein_id="AAB65640.1" /translation="MSTLSPSVVISDDEPGYDLDLFCIPNHYAEDLEKVFIPHGLIMD RTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVDFIRL KSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVKQYSPKMVKV ASLLVKRTSRSVGYRPDFVGFEIPDKFVVGYALDYNEHFRDLNHVCVISESGKAKYKA " gap 980..1079 /estimated_length=unknown exon 1354..1460 /gene="hprt" /number=2 gap 1733..1832 /estimated_length=unknown exon 1958..2141 /gene="hprt" /number=3 gap 2307..2406 /estimated_length=unknown exon 2698..2763 /gene="hprt" /number=4 gap 3001..3100 /estimated_length=unknown exon 3315..3332 /gene="hprt" /number=5 gap 3553..3652 /estimated_length=unknown exon 3843..3925 /gene="hprt" /number=6 gap 4151..4250 /estimated_length=unknown exon 4628..4674 /gene="hprt" /number=7 exon 4845..4921 /gene="hprt" /number=8 exon 5599..6097 /gene="hprt" /number=9 BASE COUNT 1660 a 1180 c 1326 g 1926 t ORIGIN 1 tcctttcctg gtagctgggc atataagcca ttctcaccat accaggctta aaatgctcac 61 tttatgtaaa ggcaaagcag tttagggtct aattctcata agcttaccaa ggagcttcgt 121 tttccttttg tattggtacc ctgatctggc tgtttagggc tgtggtgctc aattcttacg 181 acgaagtaag aatgtttgaa agaactgggc ctaagaggaa tcacatcatg ggggggaacc 241 ctaagagctc atgagggagt aaaatgcgga aggagttagg tatggttatt tgggttatta 301 agtatggtta tgagtcctct gggggactac agtgggcctg ggggctgcag cacggccagt 361 accattttct tcaggaacaa aattcccagg cccaacttgt cagaacagag tccaggaact 421 gcctgtggag gctcctggga gaacgcccgg cagagagcct caggggaccg gacctgggcg 481 gtccgagggg gcggtccgag ggggcggtcc gaggggcggt ccgacgggcg gggcctgatt 541 cgtggcgtct ctgaggtgtt gtcgaggcgg cgaagacgag cgttggactt acctcactgc 601 ttttcctagc ggtagcacct cctccgccag cttcctcctc agaccgcttt tcccgcgagc 661 cgaccggttc tgtcatgtcg accctcagtc ccagcgtcgt ggtgagccag ggggactccg 721 gtagagccct acggccagcc ccacgcggcc ggtcgcacag tgacgccggc cggggccctg 781 aggctcctga ggccggctct gggcgttggg gcggccggga ctctcggggg cgtgggcggt 841 cgcagattcc tggagtctgg ctggttgccc catgagggcg acgggcagga cggaatggcg 901 gggtacgggg ccggggcgcc cctctagtga gccccgagag agtgagagag ggctggctgc 961 gtgtgggccc agaaggtggn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1021 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnna 1081 gggccttgcg cgtgctaagc aagcgctcca cggctgagct aaatctccaa cccctgtgtc 1141 atgttttact tctcattctt gacccttttc agcaataaga cacatggttt tcttagagaa 1201 gtataattta ttacaaaaac ggtaaaattt aactgctcta aataccccct catacctaaa 1261 ttcctctggt aaactaagac ttattattta agttgaatta aatgtggata tcttataatg 1321 ctttgttttg aaacagctgt ctttcttttg cagattagtg atgatgaacc aggttatgac 1381 ctagatttat tttgcatacc taatcattat gctgaagatt tggaaaaggt gtttattcct 1441 catggactga ttatggacag gttagtaaga ccttgattga agttattttt agaggggtgt 1501 gggggggcat atgtgatata tatgtgaagt gcatgcatgt atatggaatc cagagaagga 1561 cattaggtat cctagtctct tgctctctta ttcccttgaa tcagtgtctc tcattgaacc 1621 tggagcatac atactgatat gggtaggctg tctgcctggc taacaaggcc cagggatctg 1681 cttgtatctg gccccgcagt gctgaagtta caagcaggtg cagcacacct ggnnnnnnnn 1741 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1801 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnttgcttaa tgaatcaaga attgccttca 1861 tggagacagg atgtgtcctg tagaagttta atgcttaaga ggtatttgtt ataaaacaaa 1921 tattcagaat ctttaatttc tgattttatt tctgcaggac tgaaagactt gctcgagatg 1981 tcatgaagga gatgggaggc catcacattg tggccctctg tgtgctgaag gggggctata 2041 agttctttgc tgacctgctg gattacatta aagcgctgaa tagaaatagt gataggtcca 2101 ttcctatgac tgtagatttt atcagactga agagctactg tgtaagtata attaacttac 2161 aattttttaa aaaaggacta ttctagttgt atctatattt ttttctttga agttctctaa 2221 actatactgt aatcatctta cttgatgatg gtgcaattac tattattata tattaatttt 2281 ctgtgctgga gtggaaccca gggcctnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2341 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2401 nnnnnncgga gctggggacc gaacccaggg ccttgcactc actaggcaag cgctctacca 2461 ctgagctaaa tccccaaccc ccgccaatta agatttttaa tttgtactaa tctctatgtg 2521 aaatttacct agtcattcat ttctagaaac ctaattctta taatttatat aattaaaaat 2581 accataatat tgtaaccatt agatagctaa cttcttagat cttatagatg acatctaata 2641 atttgagatt cttgtaagca cacaagaata tgcatataaa tgattttttt taactagaat 2701 gaccagtcaa cgggggacat aaaagttatt ggtggagatg atctctcaac tttaactgga 2761 aaggtatgta tcttgaaggg gaaagaaaac atttttatac caagaatcaa ttagtaactg 2821 ctttcaacta ctcagagtta ttttattaat aaaaataagg aggcattgtt taactcttaa 2881 aagtacttga tatatattaa tgttatagat taatgatata gattaatctc ctggatttat 2941 agctaaatga cagcagaaca tcacattcca tattgctaat tactgctttc tataacactt 3001 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3061 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn catcggggcc aaaatctgta 3121 ttggaagatt taatattaag gacccttctg agttctaata agcccacttg tattaaggta 3181 gggattcact catgaaagta cttataagta tgaagtgggg gaatttctta gaatagtgtt 3241 ttatgatatc actgataact ggaaatactt atctcacttc atgcaaaaat ttngaattct 3301 ccgttttctt ctagaacgtc ttgattgttg aagtaagtnc aacattcacg agtgatacac 3361 tgagtacagt ttactaaatt ggtatgtata ttaataaagg taagccaggg agacctgtgt 3421 tttctaaccc taagagaagc caggtacagc agggcatgcc tggaacactc aggaggctca 3481 tgaattcctg ggttagtctg ggctacatag tgacttctaa agcaaagcca gagagaatcc 3541 tccattttat ttnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3601 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nncccactgc 3661 ttgcttagaa ccagataggc agtaagttcc agactatctt tgaattgtga gattttgtga 3721 tgctgaaaat tgtgccatag aatactagaa tattgggttt ggtatttaca tttgtaataa 3781 tgactgactt taaaaatgtg ctcagtttat ttaccattaa atgtgtcttt tctttttaaa 3841 aggatataat tgacactggt aaaacaatgc agactttgct ttccttggtc aagcagtaca 3901 gccccaaaat ggttaaggtt gcaaggtatg tatgccattt taaagtagga tgcttttgtg 3961 tgttaataaa gctattatag tcaattcctt atatatgtat acacacacac acacataaaa 4021 tatacacaca cacacggagt atatgtaagg ccttgggttc agaactactt cagatactaa 4081 cactgcatct tgtctacgtt ccttccctct ccctactcct cccagatctg tcctcccttc 4141 cctacctacc nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4201 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn gatggaagca 4261 tttcttaccc tcccttacag gcacaagggc ttgtatttca aggattctga atctagcccc 4321 cctagctttt ctcattcgag tattggcatt ccccatgcat tcgtcctcct catgagttgc 4381 atttcagtgt gggtggttag gactctgctc tcagaagcat cttagcaggt tccaggtgct 4441 gagcagtgag gggcattgac cttcatgtga actctctggg atttacttct ccctttcagt 4501 cttcctgtgg gtatgcaaag ctgaccatat tctacatgca gatgatacta cttaagaacg 4561 ctgatgtttt ctttgtaatg ctctgtagtc ttcccatatg tcccatgtaa ttttttgtaa 4621 ttaacagctt gctggtgaaa aggacctctc gaagtgttgg atacaggcca gactgtaagt 4681 agataccctt tggccaatca tttatccatc ttgtaactga aacagttaac tatgaagtgg 4741 cttagagtta accgtagaga acatttgtaa ggtacatttg caactattaa tttgaaagta 4801 ttattatttt ctctaaagac gaaattgtga ttatttactt acagttgttg gatttgaaat 4861 tccagacaag tttgttgttg gatatgccct tgactataat gagcacttca gggatttgaa 4921 tgtaagtaat gcttctcttt tttctcgctc tcatttttca aaaacccaca taaaaattta 4981 ggaaagggaa gaattgtttt ctccttccag cacctcgtaa tttgaccaga ctgatggttc 5041 ccattagtca cataaagctg tagtcaagta cagatgtcct tagaactgga acttggccag 5101 gctagggtga cactccttgc tggctgaaat agttgaacag ctttaatata taataactgt 5161 ctcattgtta tttcacatga taaatatagt cataagtaag aaataaatga ttcagtttga 5221 attttgtaat tgactttgct tcagatatca gtgttcctgc tcagagggaa ggggcccctc 5281 gggcgagttt tccgagcatg gcccaggagc agttagaaag actatgtgga cagtattatc 5341 taaagtatgc tttttatttt acttacctgg gcccctattt tgattccagc tttatgtttc 5401 ttaaagttaa catagtaaga caaagaaaag gcaaagtaat ggactacaat tttctgcttt 5461 gttttcaaag tatgttctct tcaattgctg gtccaaaata ccttgcttgg taggaaccca 5521 ggcggtgtag gggattctct aatgctggtg ttgtctcttc agaatccatt tttctaatgt 5581 gaatgtctta ttctatagca tgtttgtgtc atcagcgaaa gtggaaaagc caagtacaaa 5641 gcctaaaaga cagcggcaag ttgaatctac aagagtcctg ttgatgtggc cagtaaagaa 5701 ctagcagacg ttctagtcct gtggccatct acttagtaaa gcttttgcat gaaccttcta 5761 tgaattttat ggtttttatt tttagaaatg tctgttgctg cgtccctttt gatttgcact 5821 atgagcctgt aggcagccta ccgtcaggta gattgtcact tcccttgtga gacagacaga 5881 tctcttaaat taccactgtt aaataataat actgagattg tatctgtaag aaggatttaa 5941 aaagaagctg tattagtttt ttaattggta ttttaatttt tatatattca ggagagaaag 6001 atgtgatatt gttaatttag aatagtctaa agcgctcagt ttcatatcag taacagcatc 6061 taagaggttt ccccagtgga ataaacatgt ttcagcagtg tgaatcgttg tcaaccgttc 6121 cttttaaatg caaataaata cattcgtaaa aatttacaaa ttttgagttt tttttcctta 6181 aaactaagga ctatctcttt aaaggaattc tccatgccta tcatttctct acaaattaat 6241 ttagtatact tttccatggg tcccctttgc atgttttagt agctaattta gttttaatac 6301 tgggttagca ttgcaagtag tggtatgtgg taaaatggta aagcgggaaa gcccttacct 6361 acctgaaaca atcaattaca tacactcagc atgatttact atgctttata agagaacatg 6421 gctttctctt agctttctga ggttgttcag actgcagcag tctgacctac agtttgtttt 6481 cagacatgtt cctggtacct tttttttttc tttttttcag agctggggac caaacccagg 6541 gccttgctct tgctaggcaa gcgctctacc actgagctaa atcccgtcct gttacctttt 6601 tggtgtggat aaagctttat tgagcaaaga acaataacag taaaacagtt gttttgtctt 6661 ttcagagtaa gagaaatacc agcccggccg tcgg //