LOCUS AB670241 3215 bp DNA linear VRL 11-JAN-2012
DEFINITION Hepatitis B virus gene for x protein, complete cds, isolate: HCC
pt No.5.
ACCESSION AB670241
VERSION AB670241.1
KEYWORDS .
SOURCE Hepatitis B virus
ORGANISM Hepatitis B virus
Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
Blubervirales; Hepadnaviridae; Orthohepadnavirus.
REFERENCE 1 (bases 1 to 3215)
AUTHORS Tatsukawa,M., Takaki,A., Shiraha,H., Koike,K., Iwasaki,Y.,
Kobashi,H., Fujioka,S., Sakaguchi,K. and Yamamoto,K.
TITLE Direct Submission
JOURNAL Submitted (09-SEP-2011) to the DDBJ/EMBL/GenBank databases.
Contact:Masashi Tatsukawa
Okayama University Graduate School of Medicine, Dentistry, and
Pharmaceutical Sciences, Department of Gastroenterology and
Hepatology; 2-5-1 Shikata-cho, Kitaku, Okayama city, Okayama
prefecture 700-8558, Japan
REFERENCE 2
AUTHORS Tatsukawa,M., Takaki,A., Shiraha,H., Koike,K., Iwasaki,Y.,
Kobashi,H., Fujioka,S., Sakaguchi,K. and Yamamoto,K.
TITLE Hepatitis B virus core promoter mutations G1613A and C1653T are
significantly associated with hepatocellular carcinoma in the
genotype C HBV-infected patients
JOURNAL Unpublished (2011)
COMMENT
FEATURES Location/Qualifiers
source 1..3215
/db_xref="taxon:10407"
/isolate="HCC pt No.5"
/isolation_source="Serum from Patient"
/mol_type="genomic DNA"
/note="Isolated from HCC pt No. 5"
/organism="Hepatitis B virus"
/serotype="C"
CDS 1374..1838
/codon_start=1
/product="x protein"
/protein_id="BAL44899.1"
/transl_table=1
/translation="MAARVCCQLDPARDVLCLRPVSAESRGRPVSGPFGPLPSPSSSA
VPADHGAHLSLRGLPVCAFSSAGPCALRFTSARRMETTVNAHQVLPKVLYKRTLGLSA
MSTTDLEAYFKDCLFKDWEELGEEIRLMIFVLGGCRHKLVCSPAPCNFFTSA"
BASE COUNT 718 a 873 c 713 g 898 t
ORIGIN
1 ctccacaaca ttccaccaag ctctgctaga ccccagagtg aggggcctat accttcctgc
61 tggtggctcc agttccggaa cagtaaaccc tgttccgact actgcctcac ccatatcgtc
121 aatcttctcg aggactgggg accctgcacc gaacatggag agcacaacat caggattcct
181 aggacccctg ctcgtgttac aggcggggtt tttcttgttg acaagaatcc tcacaatacc
241 acagagtcta gactcgtggt ggacttctct caattttcta gggggagcac ccacgtgtcc
301 tggccaaaat tcgcagtccc caacctccaa tcactcacca acctcttgtc ctccaatttg
361 tcctggctat cgctggatgt gtctgcggcg ttttatcata ttcctcttca tcctgctgct
421 atgcctcatc ttcttgttgg ttcttctgga ctaccaaggt atgttgcccg tttgtcctct
481 acttccagga acatcaacta ccagcacggg accatgcaag acctgcacga ttcctgctca
541 aggaacctct atgtttccct cttgttgctg tacaaaacct tcggacggaa actgcacttg
601 tattcccatc ccatcatcyt gggctttcgc aagattccta tgggagtggg cctcagtccg
661 tttctcctgg ctcagtttac tagtgccatt tgttcagtgg ttcgyagggc tttcccccac
721 tgtttggctt tcagttatat ggatgatrtg gtattggggg cmaagtctgt acaacatctt
781 gagtcccttt wtacctctat taccaatttt cttttgtctt tgggtataca tttgaaycct
841 aataaaacca aacgktgggg ctactccctt aacttcatgg gatatgtaat tggaagttgg
901 ggtactttac cacaggaaca tattgtacrs aaamtcaagc aatgttttcg raaactgcct
961 gtaaatagac ctattgattg gaaagtatgt caaagaattg tgggtctttt gggctttgct
1021 gcccctttta cacaatgtgg ctatcctgcc ttgatgcckt tatatgcatg tatacamtct
1081 aagcaggctt tcactttctc gccaacttac aaggcctttc tgtgtaaaca atatctgcac
1141 ctttaccccg ttgcccggca acggtcaggt ctctgccaag tgtttgctga cgcaaccccc
1201 actggatggg gcttggccat aggccatcgg cgcatgcgcg gaacctttgt ggcttctctg
1261 ccgatccata ctgcggaact cctagcagct tgttttgctc gcagccggtc tggagcaaac
1321 cttatcggga ctgacaactc tgttgtcctc tctcggaaat acacctcctt cccatggctg
1381 ctcgggtgtg ctgccaactg gatcctgcgc gggacgtcct ttgtctacgt cccgtcagcg
1441 ctgaatcccg cggacgaccc gtctcggggc cgtttgggcc tctaccgtcc ccttcttcgt
1501 ctgccgttcc agccgaccac ggggcgcacc tctctttacg cggtctcccc gtctgtgcct
1561 tctcatctgc cggaccgtgt gcacttcgct tcacctctgc acgtcgcatg gagaccaccg
1621 tgaacgccca ccaggtcttg cccaaggtct tatataagag gactcttgga ctctcagcaa
1681 tgtcaacgac cgaccttgag gcatacttca aagactgttt gtttaaggac tgggaggagt
1741 tgggggagga gattaggtta atgatctttg tactaggagg ctgtaggcat aaattggtct
1801 gttcaccagc accatgcaac tttttcacct ctgcctaatc atctcttgtt catgtcctac
1861 tgttcaagcc tccaagctgt gccttgggtg gctttgggac atggacattg acccgtataa
1921 agaatttgga gcttctgtgg agttactctc ttttttgccg tctgacttct ttccttctat
1981 tcgagatctc ctcgacaccg cctcagctct gtatcgggag gccttagagt ctccggaaca
2041 ttgtacacct caccatacag cactcaggca agctattctg tgttggggtg agttgatgaa
2101 tctggccacc tgggtgggaa gtaatttgga agacccagca tccagagaat tagtagtcgg
2161 ctatgtcaat gttaatatgg gcctaaaact tagacaacta ctgtggtttc acatttcctg
2221 tcttactttt ggaagagaaa ctgttcttga gtatttggtg tcttttggag tgtggattcg
2281 cactcctcct gcttacagac caccaaatgc ccctatctta tcaacacttc cggaaactac
2341 tgttgttaga cgacgaggca ggtcccctag aagaagaact ccctcgcctc gcagacgaag
2401 gtctcaatcg ccgcgtcgca gaagatctca atctcgggga tctcaatgtt agtatccctt
2461 ggactcataa ggtgggaaac tttactgggc tttattcttc tactgtacct gtctttaatc
2521 ctgagtggca aactccctcc tttcctcaca ttcatttaca ggaggacatt atcgatagat
2581 gtcaacaata tgtgggccct cttacagtta atgaaaaaag gagattaaaa ttaattatgc
2641 ctgctaggtt ctatcctaac cttaccaaat atttgccctt ggacaaaggc attaaaccat
2701 attatcctga acatgcagtt aatcattact tcaaaactag gcattattta catactctgt
2761 ggaaggcggg cattctatat aagagagaaa ctacacgcag cgcctcattt tgtgggtcac
2821 catattcttg ggaacaagag ctacagcatg ggaggttgga cttccaaacc tcgacaaggc
2881 atggggacga atctttcggt tcccaatcct ctgggattct ttcccgatca ccagttggac
2941 ccggcgttcg gagccaactc aaacaatcca gattgggact tcaaccccaa caaggatcac
3001 tggccagagg caaatcaggt aggagcggga gcatttgggc cagggttcac cccaccacac
3061 ggcggtcttt tggggtggag ccctcaggct cagggcatat tgacaacagt gccagtagca
3121 cctcctcctg cctccaccaa tcggcagtca ggaagacagc ctactcccat ctctccacct
3181 ctaagagaca gtcatcctca ggccacacag tggaa
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