LOCUS       AB479526                2272 bp    DNA     linear   INV 05-FEB-2009
DEFINITION  Haematobia irritans exigua mitochondrial COI gene for cytochrome
            oxidase subunit I, tRNA-Leu gene, COII gene for cytochrome oxidase
            subunit II, partial cds and complete sequence, clone: V1.
ACCESSION   AB479526
VERSION     AB479526.1
KEYWORDS    .
SOURCE      mitochondrion Haematobia irritans exigua (buffalo fly)
  ORGANISM  Haematobia irritans exigua
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Haematobia.
REFERENCE   1  (bases 1 to 2272)
  AUTHORS   Ishiguro,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2009) to the DDBJ/EMBL/GenBank databases.
            Contact:Naotaka Ishiguro
            gifu university, Faculty of Applied Biological Sciences;
            yanagido1-1, gifu, gifu 5011193, Japan
            URL    :http://www1.gifu-u.ac.jp/~naishigu/index.html
REFERENCE   2  
  AUTHORS   Iwasa,M. and Ishiguro,N.
  TITLE     Genetic difference of Haematobia irritans and H.exigua, and
            molecular phylogeny of Japanese Stomoxyini files (Diptera,
            Muscidae)
  JOURNAL   Unpublished (2009)
COMMENT     
FEATURES             Location/Qualifiers
     source          1..2272
                     /clone="V1"
                     /collection_date="2004-11-19"
                     /db_xref="taxon:34678"
                     /geo_loc_name="Viet Nam:Thua Thien Hue, Hue"
                     /identified_by="Iwasa M"
                     /mol_type="genomic DNA"
                     /organelle="mitochondrion"
                     /organism="Haematobia irritans exigua"
                     /sub_species="exigua"
     CDS             <1..1515
                     /codon_start=1
                     /gene="COI"
                     /product="cytochrome oxidase subunit 1"
                     /protein_id="BAH20892.1"
                     /transl_table=5
                     /translation="HKDIGTLYFIFGAWSGMIGTSLSILIRAELGHPGALIGDDQIYN
                     VIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPALTLLL
                     VSSMVEKGAGTGWTVYPPLSSNIAHGGASVDLAIFSLHLAGISSILGAVNFITTVINM
                     RATGITFDRMPLFVWSVVITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPI
                     LYQHLFWFFGHPEVYILILPGFGMISHIISQESGKKETFGSLGMIYAMLAIGLLGFIV
                     WAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLATLYGTQLTYSPAILWALGFV
                     FLFTVGGLTGVVLANSSVDIILHDTYYVVAHFHYVLSMGAVFAIMAGFVHWYPLFTGL
                     TMNNKMLKSQFVIMFIGVNLTFFPQHFLGLAGMPRRYSDYPDAYTTWNVISTIGSTIS
                     LLGILYLFYIIWESLVSQRQVIFPIQLNSSIEWLQNTPPAEHSYNELPLLVNFG"
     tRNA            1511..1576
                     /product="tRNA-Leu"
     CDS             1581..>2272
                     /codon_start=1
                     /gene="COII"
                     /product="cytochrome oxidase subunit 2"
                     /protein_id="BAH20893.1"
                     /transl_table=5
                     /translation="MGSTWANLGLQDSSSPLMEQLIFFHDHALLILVMITVLVGYLMF
                     TLFFNNYVNRFLLHGQTIEIIWTILPAIILLFIAFPSLRLLYLLDEINEPSVTLKAIG
                     HQWYWSYEYSDFSNVEFDSYMIPTNELSIDSFRLLDVDNRVVLPMNSQIRILVTAADV
                     IHSWTVPALGVKVDGTPGRLNQTNFLINRPGLFYGQCSEICGANHSFMPIVIESIPVN
                     YFIKWISNNNSS"
BASE COUNT          712 a          300 c          334 g          926 t
ORIGIN      
        1 cataaggata ttggtacttt atattttatt tttggagctt gatctggaat aattggaact
       61 tcattaagaa ttctaattcg agctgaatta ggacatcctg gagctttaat tggtgatgat
      121 caaatttata atgtaattgt tacagctcat gcatttatta taattttctt tatagttata
      181 cctattataa ttggagggtt tggaaattga ttagttcctt taatattagg agctcctgat
      241 atagcattcc ctcgaataaa taatataagt ttttgattac tacctcctgc tttaacatta
      301 ttgttagtaa gcagtatagt agaaaaggga gctggtacag gatgaacagt ttaccctcct
      361 ttatcatcta atattgctca tggaggagct tcagtagatt tagctatttt ttcattacat
      421 ttagctggaa tttcttctat tttaggagct gtaaatttta ttacaactgt aattaatata
      481 cgagctactg gaattacatt tgatcgaata cctttatttg tttgatctgt tgtaattact
      541 gctttattat tacttttatc tttaccagta ttagctggag ctattactat attattaact
      601 gaccgaaatt taaatacttc attctttgat ccagcaggag gaggtgatcc aattttatac
      661 caacatttat tttgattttt tggtcatcca gaagtttata ttttaatttt acctggattt
      721 ggaataattt ctcatattat tagtcaagaa tcaggaaaga aggaaacatt cggatcatta
      781 ggaataattt atgctatatt agcaattgga ttattaggat ttattgtttg agctcatcat
      841 atgtttactg ttggaataga cgttgatact cgagcttatt tcacatcagc tacaataatt
      901 attgctgttc caacaggaat taagattttt agttgattag ctactcttta tggaactcaa
      961 ttaacttatt ctcctgctat tttatgagct ttaggatttg tatttttatt cacagttgga
     1021 ggattaactg gtgtagtatt agctaattca tcagttgata ttattcttca tgatacatat
     1081 tatgtagttg ctcatttcca ctatgtatta tcaataggag ctgtatttgc aattatagct
     1141 ggatttgtac actgatatcc tttatttact ggattaacaa taaataataa gatattaaag
     1201 agtcaatttg taattatatt tattggggta aatttaacat tcttccctca acatttctta
     1261 ggattagctg gaatacctcg acgatactct gattatcctg atgcttatac tacttgaaat
     1321 gtaatttcta ctattggatc aactatttca ttattaggaa ttttatattt attttatatt
     1381 atttgagaaa gtttagtttc tcaacgacaa gtaattttcc caattcaatt aaattcatct
     1441 attgaatgac tacaaaatac accaccagca gaacatagtt ataatgaatt gcctttatta
     1501 gttaatttcg ggtaatatgg cagattagtg caatggattt aagctccata tataaagtat
     1561 tttactttta ttagaaacta atggggtcaa catgagcaaa tttaggttta caagatagtt
     1621 cttctccttt aatagaacaa ttaatttttt ttcatgatca cgctctttta attttagtaa
     1681 taattactgt attagttgga tacttaatat ttactttatt ttttaataat tacgtaaatc
     1741 gattcctttt acatggtcaa actattgaaa ttatttgaac aattttacca gcaattattt
     1801 tattatttat tgcttttcct tctcttcgat tattatattt attagatgaa attaatgaac
     1861 cttcagtaac attaaaggct attggtcatc aatgatattg aagttatgaa tattcagatt
     1921 ttagtaatgt tgaatttgat tcatatataa ttccaacaaa tgaattatca attgatagtt
     1981 ttcgtttatt agatgttgat aatcgagttg tattacctat aaattctcaa attcgaattt
     2041 tagtaactgc agctgatgta attcattcat gaactgttcc agctttaggt gtaaaggttg
     2101 atggaactcc tggacgtctt aatcaaacaa attttttaat taatcgacca ggattatttt
     2161 atggtcaatg ttcagaaatt tgtggagcta atcatagttt tataccaatt gtaattgaaa
     2221 gaatccctgt aaattatttc attaaatgaa tttctaataa taattcttca tt
//