LOCUS AB041648 1835 bp mRNA linear ROD 06-OCT-2006 DEFINITION Mus musculus brain cDNA, clone MNCb-0091. ACCESSION AB041648 VERSION AB041648.1 KEYWORDS FLI_CDNA; fis (full insert sequence). SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 1835) AUTHORS Hashimoto,K., Osada,N., Kusuda,J. and Sugano,S. TITLE Direct Submission JOURNAL Submitted (13-APR-2000) Contact:Katsuyuki Hashimoto National Institute of Infectious Diseases, Division of Genetic Resources; 23-1, Toyama 1-chome, Shinjuku-ku, Tokyo 162-8640, Japan URL :http://www.nih.go.jp/yoken/genebank/ REFERENCE 2 AUTHORS Osada,N., Kusuda,J., Tanuma,R., Ito,A., Hirata,M., Sugano,S. and Hashimoto,K. TITLE isolation of full-length cDNA clones from mouse brain cDNA library made by oligo-capping method. JOURNAL Unpublished (2000) COMMENT URL: http://www.nih.go.jp/yoken/genebank/ Lib Name: Sugano mouse brain mncb Lab host: TOP10 Vector: pME18S-FL3 1st strand cDNA was primed with an oligo(dT) primer [ATGTGGCCTTTTTTTTTTTTTTTTT]; double-stranded cDNA was synthesized using specific 5' and 3' primers and amplified by PCR. The PCR product was digested with SfiI and size selection was performed to exclude fragments <1.5kb.The SfiI-digested PCR product was cloned into distinct DraIII sites of pME18S-FL3. XhoI sites just outside the DraIII sites can be used to isolate the cDNA insert. Library was constructed by Sugano et al.(University of Tokyo, Institute of Medical Science). Custom primer used for sequencing ( 5' end primer [CTTCTGCTCTAAAAGCTGCG]; 3' end primer [CGACCTGCAGCTCGAGCACA] ). A part of this sequence is reported in AU035114 FEATURES Location/Qualifiers source 1..1835 /clone="MNCb-0091" /db_xref="taxon:10090" /dev_stage="adult" /mol_type="mRNA" /note="clone_lib: Sugano mouse brain mncb" /organism="Mus musculus" /sex="female" /strain="C57BL" CDS 280..633 /codon_start=1 /protein_id="BAA95100.1" /transl_table=1 /translation="MKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDL DKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEED YFLYVAYSDESVYGK" BASE COUNT 437 a 451 c 502 g 444 t ORIGIN 1 gtgatgtcac agcaccgccc tggtgttttt gtgtttccag ctcttgggaa aagccaccct 61 atttctttac ctggtggtcc tttaccttca ggccgcgaga tctccaggtc cttctctgga 121 cgtttagccg cgtagtgcgg cgactggcgc gtgggagctg acgcgggtgg agcgattgtg 181 ataaggctga cattgactgg gggtggccag acgcgagacg cagtcatcag cgcgcgcagc 241 aggccccgtc cggggagccc ctacatcctg aggtccatca tgaagttcca gtataaggag 301 gaccacccct tcgagtatcg gaaaaaggaa ggtgaaaaga ttaggaagaa atacccggac 361 cgggtgccgg tcatcgtgga gaaggctcct aaagccaggg tccctgatct ggataagagg 421 aagtaccttg tgccctccga cctcactgtt ggccagttct acttcttaat ccggaagagg 481 atccacctga gacctgagga cgccttattc ttctttgtca acaacaccat ccctcccacc 541 agtgctacca tgggccagct gtatgaggac aaccacgagg aagactattt tctgtatgtg 601 gcctacagtg atgaaagtgt ctatggaaaa tgaggcagaa gcccagcaga tgggagcacc 661 tggacttggg ggtaggggag gggtgcgcgt gggacttggg gaaccagagg gagggctccc 721 aaccatggag gagacgcaag gtgaagacat cgggaaacat cacaccgcac acgctgtcgt 781 ctttttttca caagctcaat tgttactttt ctctgcttcc tcagcccagg aagaacttgt 841 gttgcattgg ctgtgagagc gggatgggga cgacatgaat cacagccttg ctgtgagctt 901 tctctcgtgc agtttcatca gaggtttggg aggagggcaa gtggccgcta gagaagaata 961 caatttagca gcaactgccg gctctttggg cagaggtttg atttttggca tttgtacaag 1021 ccgcacgggc aaagggggaa aagaatgccg taggggacca cacctaaggg accaaaggat 1081 acccactgtc actgaagcat tgtaccccta acctctgtct ccataccttc ctctcctagt 1141 ccttttcttc cacccaggct tcatagctcc gccccagttg tggcaggaga cattcgaaca 1201 gacgtttaga cgtttagagt cctcttggaa aatagggccg tgcgggaacg gttatgattg 1261 ccagcgtttt ggatggcatt aaactggagt tcagggttga acatgtcctg ctcctcatcc 1321 cataagtacc ttggactttc aggagcctca ggatcagtcc tctagcattt ccttcacctt 1381 tctcatgtac aggggcagcg tgtctgtgtg tggagggtcc gggttacaag gtaagctagg 1441 ttgcccactt gcccactcgt cctctccctg ctgcagtctc ttgggtctca cacgcactgc 1501 aaatgctaag cgatggccag ctgtctccct ccgtggcatc tgctattcaa agaagatgga 1561 gtgagagggg cgccagagtt tcatgggggc tttactcatt catttcattt anggactctg 1621 tggggggagg ggcaggcatt gcattctcac atgacatttc aattcatctc taccaatgaa 1681 gagcgtcctc cctgttggga gcaatctgta cgtctgtttt gtcagcttca ggttctggta 1741 ctttgaagtc aatgctgtca ggccagggaa ataaaataat tgcttacctt aaaagtctaa 1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaagg ccaca //