LOCUS AADA01063189 8378 bp DNA linear PRI 05-DEC-2003 DEFINITION Pan troglodytes ctg_63188, whole genome shotgun sequence. ACCESSION AADA01063189 AADA01000000 VERSION AADA01063189.1 DBLINK BioProject: PRJNA13184 BioSample: SAMN02981217 KEYWORDS WGS. SOURCE Pan troglodytes (chimpanzee) ORGANISM Pan troglodytes Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan. REFERENCE 1 (bases 1 to 8378) CONSRTM Chimpanzee Sequencing and Analysis Consortium TITLE Initial sequence of the chimpanzee genome and comparison with the human genome JOURNAL Nature 437 (7055), 69-87 (2005) PUBMED 16136131 REFERENCE 2 (bases 1 to 8378) AUTHORS Birren,B., Nusbaum,C., Abebe,A., Abouelleil,A., Adekoya,E., Ait-zahra,M., Allen,N., Allen,T., An,P., Anderson,M., Anderson,S., Arachchi,H., Armbruster,J., Bachantsang,P., Baldwin,J., Barry,A., Bayul,T., Blitshsteyn,B., Bloom,T., Blye,J., Boguslavskiy,L., Borowsky,M., Boukhgalter,B., Brunache,A., Butler,J., Calixte,N., Calvo,S., Camarata,J., Campo,K., Chang,J., Cheshatsang,Y., Citroen,M., Collymore,A., Considine,T., Cook,A., Cooke,P., Corum,B., Cuomo,C., David,R., Dawoe,T., Degray,S., Dodge,S., Dooley,K., Dorje,P., Dorjee,K., Dorris,L., Duffey,N., Dupes,A., Elkins,T., Engels,R., Erickson,J., Farina,A., Faro,S., Ferreira,P., Fischer,H., Fitzgerald,M., Foley,K., Gage,D., Galagan,J., Gearin,G., Gnerre,S., Gnirke,A., Goyette,A., Graham,J., Grandbois,E., Gyaltsen,K., Hafez,N., Hagopian,D., Hagos,B., Hall,J., Hatcher,B., Heller,A., Higgins,H., Honan,T., Horn,A., Houde,N., Hughes,L., Hulme,W., Husby,E., Iliev,I., Jaffe,D., Jones,C., Kamal,M., Kamat,A., Kamvysselis,M., Karlsson,E., Kells,C., Kieu,A., Kisner,P., Kodira,C., Kulbokas,E., Labutti,K., Lama,D., Landers,T., Leger,J., Levine,S., Lewis,D., Lewis,T., Lindblad-toh,K., Liu,X., Lokyitsang,T., Lokyitsang,Y., Lucien,O., Lui,A., Ma,L.J., Mabbitt,R., Macdonald,J., Maclean,C., Major,J., Manning,J., Marabella,R., Maru,K., Matthews,C., Mauceli,E., Mccarthy,M., Mcdonough,S., Mcghee,T., Meldrim,J., Meneus,L., Mesirov,J., Mihalev,A., Mihova,T., Mikkelsen,T., Mlenga,V., Moru,K., Mozes,J., Mulrain,L., Munson,G., Naylor,J., Newes,C., Nguyen,C., Nguyen,N., Nguyen,T., Nicol,R., Nielsen,C., Nizzari,M., Norbu,C., Norbu,N., O'donnell,P., Okoawo,O., O'leary,S., Omotosho,B., O'neill,K., Osman,S., Parker,S., Perrin,D., Phunkhang,P., Piqani,B., Purcell,S., Rachupka,T., Ramasamy,U., Rameau,R., Ray,V., Raymond,C., Retta,R., Richardson,S., Rise,C., Rodriguez,J., Rogers,J., Rogov,P., Rutman,M., Schupbach,R., Seaman,C., Settipalli,S., Sharpe,T., Sheridan,J., Sherpa,N., Shi,J., Smirnov,S., Smith,C., Sougnez,C., Spencer,B., Stalker,J., Stange-thomann,N., Stavropoulos,S., Stetson,K., Stone,C., Stone,S., Stubbs,M., Talamas,J., Tchuinga,P., Tenzing,P., Tesfaye,S., Theodore,J., Thoulutsang,Y., Topham,K., Towey,S., Tsamla,T., Tsomo,N., Vallee,D., Vassiliev,H., Venkataraman,V., Vinson,J., Vo,A., Wade,C., Wang,S., Wangchuk,T., Wangdi,T., Whittaker,C., Wilkinson,J., Wu,Y., Wyman,D., Yadav,S., Yang,S., Yang,X., Yeager,S., Yee,E., Young,G., Zainoun,J., Zembeck,L., Zimmer,A., Zody,M. and Lander,E. TITLE Direct Submission JOURNAL Submitted (26-NOV-2003) Whitehead Institute/MIT Center for Genome Research, 320 Charles Street, Cambridge, MA 02142, USA FEATURES Location/Qualifiers source 1..8378 /organism="Pan troglodytes" /mol_type="genomic DNA" /isolate="Yerkes chimp pedigree #C0471 (Clint)" /db_xref="taxon:9598" BASE COUNT 2413 a 1900 c 1977 g 2088 t ORIGIN 1 ttcactgaca aatctgatgt gggtcttcat tatcctcacc atgtctttcc ctttattgat 61 gtcttcaccc ttatctacct tttctaaatc tttcccactt cccccttgca ctgggtctct 121 atggcaggtc tgggttctcc tgtctcccct ccctcttacc ttccagagcc agaactgaag 181 acaccaggag cagcacccat aggctacaca ccatgcccgc cactctgttc cctaactggg 241 cagccccttc agtagccatg ggacatcttc agggcgtcca ccatcgcccc agccaccacc 301 ctgctcctgg gtggggctgc agcttttgca agactcaggg tgtacagcta agcttgcttc 361 ctgaggagac acacaagacc agaagaggca gatgggaaga aagtgtttct tcatatacag 421 cccaagctcc aaaagctgac cccgtgtctg tgtctcctcc tacagctctc caatcgcccc 481 agcacccacc atgggacaga agccaggttg catactgcct ctcctgagcc ggtgcacatt 541 tgaccatctt ggagtgttca tgcctactcc ctgtgtgacc ctgtctctgt gttcatttct 601 cacagctctc cttcctagaa gtggggcaga gggtgtttct gggtcaatct tacccttttt 661 ttttttctgc aaggggttat tccagttctt tctcttcatt tactctcctc ccttcctcca 721 acagccaccc tgtattggaa gttagaagat tttcattaaa ggcagctggt taagaagctg 781 ctgcatccta cggacacatg aattgaatcc tcaccacacc gccccacccc cgatggacct 841 ggatgctcta gaaatttcag aggggcagtg aagcagtgaa gcgggaggga cacaggaaga 901 tggctgtggg gtatgatggg agggaaggga ccagaataaa tacagaaaga acacaggcat 961 gaagattcag tctgataaat gagacagtgc agggaggggg cagagctatg gaggtctggc 1021 atacactttg tgaacaaaga tcctcgtgcc ccaaggggtg catgttttcc tagagcttac 1081 agaagaataa ccctatggct ttaacatatg aaaagatgct tcttgtttgc tcacattgaa 1141 aggaaaccag gttaaaacta cagcaacagg ccatttgtta tagaaggaat atttgtgccc 1201 cccctccact catatgttga aatcctaact cccaagatga tggtattaga agatggggcc 1261 tttgggagga aattttaggt catgagggtg gagccctcac taatcatgag attagtgccc 1321 agatgaaaga gaccccaaag ggctttctca ccctttttct gccattcgag gacacaacaa 1381 agaagagggc agtctgaaac ctagaagaga ggcttcgcca ggaactgacc atgccggcac 1441 cctgatcttg gacttcccag catccagact gtgagaaaga tatttctatt gtgtataagc 1501 tactaggtct attgcacttt gttatggcag ccacagttgc ctaagacacc atttttacca 1561 tgttggacaa gatatgggaa ataggttctc ttgtacatac tctgcttgaa tccaaattgg 1621 aatattctct tgggaggaca attgggtaat atctttccag caactacatt gtaagaatgt 1681 gtccttcagg tactgtatac ttgtatgggt ttgcacagat gtttgaacaa agacattaat 1741 tgcaaattgt ttataagaga aaaggctgta aactaactgt ccatcaattg gaagacagta 1801 aaattatagt acatccttag aaagaaatat gggcaactgt ttatgcactg atataaaaag 1861 catttccaag tgaaagtggg acaatggaga acagtgtaaa gtaagctccc ctttgttaag 1921 aaggatatat acacatacat atgtatggaa ggatatctat ggaagagcat ccaaaacctg 1981 tgaaaaaggc aaaggaaatg gactgagacc cagtgcaagg gagacttaac tttcattgta 2041 ttctcattaa ttgtatccat ttaaattttt gcattcttaa actcttgcat gtgtattctt 2101 tcaactaaat cattaattaa aattttcttt aaaactatag gataataact gtttagtaaa 2161 gttaatcaaa acagtgttca tatcctcata atggcttctc agaactatgt agtaagctac 2221 ctcttatata aaaccttcct gtgccttcag aaggcacacc actaagctca cgagcaaatg 2281 aacagaagga atagctacct ccagcgtcac aatgaagaca aacaggcttg gcacctcctt 2341 tgcttgttga tctagagatt ggcggttctc tatctctcct cgtgtctgag tctcagaagt 2401 ctgtgaatta agtggactat aatcccttta tttctgtgaa gaaaaaaaag agacatgttg 2461 cccagattgc tcaaaagaca tagaactgag aggaaaacaa aaaaaaaaaa gccaattaga 2521 agagaagttg tgatttgttt ttcctggata tatatggcct tgggattgtt gaaagctatc 2581 ataaaacaaa aatcaaacta tgaaacttta attgcgacaa atatgaaaat cataatttga 2641 ttcctactaa tttttttctg gcactgcggg ctgtgctgtc catgaagtta tcatggaaag 2701 acaccatttc tacatacgcg tgggctgatg tagagtgggc acctgccaac tagcccctga 2761 aactcacctt ttgtacatct ttaaccctat ttgtgaaata gagagttcaa tttacagcct 2821 atggagacaa gtaaggagca tttccatatg gcaaattgct cttaagtaat gttctttgca 2881 aaaatgtctg aaatgctact aggatccttc acagatgaaa taaatgcttt ggagaggaac 2941 ggggagatca tgaagtaaaa agcaggcata gctattcaat tctgtaacct tggcaccgtc 3001 accagtggct gtttaataaa tatcctaaag taattcatgt tgtaagtgca ccccccccaa 3061 actctcaatg gcttaatttg gagacgtgct tgacacactg aagcaaacca gagtcacgga 3121 gtccttagaa atactgttat cagggaaaga aaatgccagc agcaggtttt taaacaatga 3181 agtctatttt accatttgcc tagaagttat tctttaaaat agtctctttc tttcactcag 3241 aacatggatg gattctgtaa tctgtacaaa gaagaaacag taagccctgt gtcttctcaa 3301 gcttacaact aggcaaataa tcatgaagaa ggaacaataa atattttgga aatatttcaa 3361 tgaattattt tgaaagacag ccaagcaaga tagaaaagat gcgctgcaga tagtatcagc 3421 tgtccaatat ggaacactct ggaagatgaa tagcaagata tttgctttga tgacccgaac 3481 tacaaggaac acagtcactt gtggttgcaa tagggcgtgc ttgcatagcc ttagcatgcc 3541 tcgtaatgac aacacgaagc tggcctccct ccagaagatc cagaaaagag caaaagcaat 3601 tatgaaacat ggatgttaag gccactcagc ttctgccatc aagaaacagc ataaagaaaa 3661 gaagaaaata gagacactgc ctgtggatga ccacttcagc aattttttga aattttacta 3721 agaacaaaga tattcattaa aaagaaatgg ttgaggatct taaagtaccc agaaggatac 3781 ttctaatgtt tgatgaggac ctcttttaga ttcagatcca gatgattgaa ggttataaat 3841 acattttttc agaaaaaaaa aattgttgct gagtcagact aggaagttag atgagttctt 3901 acttatcaaa caagccaaat aaattcaaga cttttaattt taatatataa aaagaatatg 3961 ggtgtacccc tgttgcagga atccaaataa agaaaaagga agctttatta agatatggaa 4021 taaattgctg tcagcaaatt cataccactg cagattcttt tgaagccaat ttcaaaggca 4081 gaaacataag tgacaagaac acggctgctc cacatgcctg gaatgctaag taagcaggac 4141 tcagaacttg atttttcaaa ggtgtcttca atggttgtgg gcatggagca tcttctgcat 4201 ttggtccagg agagcatccc agggacaggc cagtacattt ctcctgccac agagatggga 4261 agcagcctct gcaaagccag gccccttgct cctctctcac agcctgcttg agagtcctct 4321 ctcctctgac ttacaaaagg aactggtcag tatttagaaa ttctctaaca caagaatgtg 4381 caaaagaact tatctccttt agaaaaatat tcacatttca gatgtgtata aggttttaaa 4441 aatataaaac cagaagcagc agaaatgtga acataaaaca atggtagaga aaatgagact 4501 gattagacaa agttttaggt aacaacaatt gcagtctatg actttataat attttctcag 4561 cttcttttat agatatatca cttaatatct ttttgataca gtagagacaa tagatccaca 4621 agcctgctac atctcttcgg tttacaaaaa taagactgtt tcttaggtat caaggttgtg 4681 ttttgttttc agaaactggc aaaaagtaaa gatttgtaga atcataggtt acaaagcata 4741 gcttacgagt tatgttgcta taaaaatgaa atatttcact ttgggaggcc aaggtgggcg 4801 gatcacaagg tcaggagatc gagaccgtcc tggctaacac ggtgaaaccc tgtttctact 4861 aaaaatacaa aaaaaaaaaa aaaaaaagaa attagctggg catggtggcg tgtgcctgta 4921 gtcccagctg ctggggaggc tgaggcagga gaatggcgtg aacccgggag gcggagcttg 4981 cagtgagccg agatcgtgcc actgcactcc agcctcggcg acagagcaag atgctttctc 5041 aaaaaaaaaa aaaaaaaaaa aaaaaaaaga atgacttaaa agtaaattaa attggtaaat 5101 tggtaagaat ttaaaaaatt aaccgtgctc caattaaatg ctaaatatga tattttcatg 5161 agcaaatcaa gcttacttaa tatagtttat gcacctcaat ccacaaagtg aatttttaaa 5221 gattaaataa tgtaagccaa ataagcttgg aggaaggtag gcagaagaca tattaggcca 5281 ttaaaatggg ttactgtggg aggtagaaat gaaggattgt aggtgggggc attaattttg 5341 tcttatacat aattcaatta tttttcttgt tacagtaagc ataccttatt tttataatta 5401 acgtaaaatc tcataattaa aatctaaaca aaaaagaaaa atatttgtaa aacctagaca 5461 aataagcata cgtttacatt ttattcactc cccacgccat tttccttcta tgtttcaaaa 5521 tatcaagaaa tgttcatcta taagaagaag gtagaggtgg aaatacagta ggagctgaga 5581 atgaatgagt gaagtaatgc caacaagaaa accaaaataa ttgttatctc tggctagtct 5641 ttaagcttgt ctcccaagaa gttccaactg tcccgctgct gacatcatgc atgcttctct 5701 tcgacgatgt caagcaaagg gatgaggcta tgaagggaca gaggggaacc caggggactg 5761 tccactggga acacatagta aagggcatgg ccccaaaccg agcccagaca ggaacaattt 5821 agtgagacaa agcaggctgc agagtccagc agggacagaa cagtcccgag ggcaaagggg 5881 ttcgaggttt tatgtctggt gtggttgctg ggctggtcct tacacctgtg agccacacag 5941 gtcagtgtgg gaggggtcag taccacaggc cctgtccccc attctgttcc acagctgtta 6001 aacgcccagg aaattccagt ataatccttg ctcagtttaa tgccaaagcc tctatccttt 6061 aatctccacc ttggagatct cttcgtgctc tggcctcctg ccttgagaag gatcccatca 6121 tcaggcttta tggaggcaac caggacagac agtgaggagg ggctgtcctc cggctcttct 6181 agtccctgct tccttggctg gagaagctaa tttgtagatt acctagcaga ggacagtcct 6241 gtgtccctgg aggcctccag cccctgagaa tgtcccccag agcactgtga ctcagacaaa 6301 tgtgcctccc actcccaggc tgtggagctg ggggaggctt ttaagatgca ggcagtgtct 6361 aggtctagcc agacagccac ttagaatgag ccactctgtg cactgacggg ggacatgcgt 6421 ggctctggaa aagagcataa gggagggtgt taaggcagga ggcaaatgtg cctgagagat 6481 gagtaagtgg aaggttgtgg aagaaagccc ctgagtgcca ggagtagcac ctgcgtcagc 6541 agtgcctgag gatgtgtgtc tacctggtgg agtgtgtaag ggaatgtgta tgaggtgagg 6601 tgggcgggag cagatgctgt ctgtgtagac gggggctgtt gctttcctgt ggcagaagat 6661 gcacatcagt gctggttccg gagtggttcc atgggccctt cttcctcacc ttcggcccct 6721 gctctacccc cagtctggct gtgagttgct cttggcccca ggaggtactt ctgcagaaac 6781 acctgggctg ggagagggag ccaagcgggg ggcggggagg agtgggtaaa gaaagggaaa 6841 cctgaggctt cccaaaccct ccagaacctg ccatcctcct tctacctaga gtgggaactc 6901 agggtctagg gcccaggctc aggacagggt gatagcagaa cagccgtccc agaaggagga 6961 tcctgccttt cccacgctca gcccacccca gcctgttgct ccccagcatt ctggtaactc 7021 agtgtcattg ccaaccatct ttttgcaccc tgaatggagt aatagactcc aaacaagtcc 7081 tccttctgag gccaccaggt aagtacatag acacccccac cctaatcttc ctttgagaaa 7141 aaaggcccac tgctctgaaa agccaagtgg ccccactgag cagcactcag aagcctcaat 7201 gctccaatgc cccttacttg ggcagcttct gtggtctact aacagcccca cacagctccc 7261 tcccactggt ctctcagctc aggaccagca tctcccctcc tagagcctca gtcaagttcc 7321 cctggcgggc ggagggcctg ggttaactgg gaacaggccc agcagctccg ctccatgggc 7381 gctgccaggg acattacaac attgctatgc tgggtccatg ccagctcccc cagggatggg 7441 aggagagagg gtgccagacg gccaagatcg gtgggtgggg gtgtggggca agcagggcca 7501 agcacccaga tggagggagc agagcgaggg tggagctggg gcaggagcac gcaatagaat 7561 ttggttgcac gttgggggtg atggctgggc agcaggaacc aagcgttcct tccacctcca 7621 aggcttaact gtggtcatgg ggctgggggg gacagtgcct tgtggggagc aggggacagg 7681 tgtgtggtca gcctcctgac tcctcccagc tccaagggga ttggagtgat gccactggag 7741 tcagaggggt ggcaatcctg ttccaagcgt ggagctccgt ctctgcgagg accctcccag 7801 attaggactc ccaagccaga gccagaggag aatgtctggg aacgcaactg ggggatccta 7861 acagcaaggg taatgcggtg tcaatgatgc caggtcagag tggagtgaga ggggagtagc 7921 caggttgacc gtttcctcac ccttcaggaa ccccaatctg gccttgagga aggatcctca 7981 gtactccctc aggaagccac ctaggggctg gggagcccca ctactcttgc aaaccttaat 8041 tcctctgtcc ccaagcatac tgtccccgac ccccacaacg ccgcctgcta accccgcggg 8101 ctcaccttcc cgttggccgc agtctctgca ggtctgcgcc ccccgaggcc tcgcagtgga 8161 cccggggctc ctggagctcg cacagtgcca cccgcgtctt ctccagtccg gggaccccgt 8221 tgcacccggc ccgggtccgt tcggcgccga gagtccctgg gattccgggg tggacctgac 8281 gctgccggca cgggctgctc cagacgtggg gcgcccggag atcctgaggg cccgcctctc 8341 aatcgcccac accagactgg gtccccggcc ccgatccc //