LOCUS       WKY08672.1               694 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-5496
PROTEIN_ID  WKY08672.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_007866"
                     /note="NIPPO_CHRIV.G11706.T2"
     intron_pos      8:2 (1/20)
     intron_pos      33:1 (2/20)
     intron_pos      114:2 (3/20)
     intron_pos      156:1 (4/20)
     intron_pos      171:0 (5/20)
     intron_pos      213:1 (6/20)
     intron_pos      252:1 (7/20)
     intron_pos      274:0 (8/20)
     intron_pos      286:1 (9/20)
     intron_pos      366:0 (10/20)
     intron_pos      412:2 (11/20)
     intron_pos      445:1 (12/20)
     intron_pos      457:2 (13/20)
     intron_pos      481:2 (14/20)
     intron_pos      521:1 (15/20)
     intron_pos      566:2 (16/20)
     intron_pos      590:1 (17/20)
     intron_pos      605:2 (18/20)
     intron_pos      637:1 (19/20)
     intron_pos      673:2 (20/20)
BEGIN
        1 MADPSCPRRS QSSCSNHRSH IPVQYSQRIN SNVGELRCTC PPSYYPSTHG CASVVPSRAL
       61 PHASLTASIL PKSHAMPMTS NVYSTHNYSQ YFPQHNFHRF RQGPLPNEHI SHKRCRSTVI
      121 PSMSQRTLSP PKFQYAQFCH PTRHGRTGET PVEHTSILRC YPKHNSELFM AEYSPLERLR
      181 RYPISTAAWT LPSIEPFYSV VYMRGNKEYK KEDPTDGEST DAPQNVCVTT IGGNGKQRGR
      241 RSKSARAAGH GESSLYNFMG RSESHSTSCP QRRHKQGRGH STQQSGWRGT TSSSSQPLTC
      301 ENDVFVSGTN EDSNRPRRIP FTTEPSTTGQ SETRTTDSSH VPTESLPSCC SKCRSCDGEG
      361 SGYSSSQTDE KSRSRARNKN GEECKVLREL QNLEGFLGLK NTPIGPSTGT ECCSCCCCSG
      421 TGTCPGSGQY SCSGGLPSGP YTCANCCASP SCDANQGASN STTPDASTQT PGSTSTTGGT
      481 GSQSSYQSDG VVKYNALSTN SPSMFTVPSV RGSTAQEMPL QSPGGMSNDN YITAPNAGAL
      541 TGSPSQREDS RSGGRDRRYD YREMCRPCET YDVTNITMTA EPIYDPDCMQ CADARFADRL
      601 CEKMDCACTP IIRTSPGGSI SLIDTGAAPT LVMEDRDTVM NKRNKTSLFN YLERSKHKGR
      661 TLREDVMRWV RYKSQLCRSR MQSMKKKSDK PAKT
//