LOCUS       WKY08579.1               467 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-5403
PROTEIN_ID  WKY08579.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_007812"
                     /note="NIPPO_CHRIV.G11652.T1"
     intron_pos      45:1 (1/10)
     intron_pos      106:0 (2/10)
     intron_pos      175:0 (3/10)
     intron_pos      202:0 (4/10)
     intron_pos      230:2 (5/10)
     intron_pos      278:0 (6/10)
     intron_pos      325:1 (7/10)
     intron_pos      379:1 (8/10)
     intron_pos      410:0 (9/10)
     intron_pos      452:0 (10/10)
BEGIN
        1 MQHVKPATDS DSFLGIGGII DQIIHDSITD DRHLDRILFP SNAAGPTTGW TAPAPSDPSS
       61 RPPPVPHDNR WIADAPLPPD EDQYRSIPPT NFANHRPAPP AYNREQHQPG HCRFGAEHPN
      121 QNPFQQYPSQ RFPPLPPNGV GFGENVGICL NTNPTVAMET GSPPPEARTY IQLEPRQSSV
      181 ISPSTSTATT VPNPYTRSEA NKLPTAQTSV SNGEDDQLSP TTVEACSASA TSTEEDSTTV
      241 HVMPVSETEI ERPSRSKERT SDDTTVVNIL HYEFKDRVGH PFSCHTLNLW VDGFCGSGDP
      301 TRFSLGSLGN SSRQVGVIPV RGQIGKGMQM QYEAGKTTIT CLSESPLFVQ APLHAKRLGD
      361 DTSTVYRLSG VAEAEDVESR TIDIFDESMF GNLLEEARQQ GYLHVYALQN LCICRVSFVK
      421 GFGKSYRRMT ILDTPCWIEI HFINYLQRLD EVLCALPTPA YDIPNLS
//