LOCUS WKY08551.1 321 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-5376
PROTEIN_ID WKY08551.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_007793"
/note="NIPPO_CHRIV.G11633.T1"
intron_pos 35:1 (1/6)
intron_pos 71:0 (2/6)
intron_pos 119:2 (3/6)
intron_pos 166:2 (4/6)
intron_pos 221:2 (5/6)
intron_pos 274:1 (6/6)
BEGIN
1 MHLRLLRRKR LLVPVLILFL QHAGYFALLA MINVAPPNAV EEGVIRWKRR MSNDITPTIP
61 PQNRYLGNFR ISYKYNMASC QIPFNMANIL QSTICFLENP AIFLAQNKSI SSPSSGDNRL
121 CDNNRAEKQL NSTQLTQMIA DETQFFAVIR DPIDRFISGY IDKCLSNIDT FPEGDQCFGC
181 RDDLRCFIRI LYRILIEFQS GKPVTITKLW SYINYFGPQT WFCDFEHRKK RYTLIHYHRG
241 LRAAERIAAQ LDKVLTSANV PVDQRAYIRR ELSKHKATQE SQVARSLKRR IVNDTFVLET
301 LLWMYSGDLF EFGFQNTYNF I
//