LOCUS WKY08403.1 317 aa PRT INV 31-JUL-2023
DEFINITION Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION CP130735-5227
PROTEIN_ID WKY08403.1
SOURCE Nippostrongylus brasiliensis
ORGANISM Nippostrongylus brasiliensis
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
Nippostrongylus.
REFERENCE 1 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE A Nippostrongylus brasiliensis chromosomal reference genome and its
transcriptomics
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 50441521)
AUTHORS Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
and Dillman,A.R.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Date :: 03-JUN-2022
Assembly Method :: raven v. 1.7.0; sourmash v. MAR-2022;
racon v. 1.4.20; POLCA (in MaSuRCA) v.
4.0.8; 3d-dna v. 180419
Assembly Name :: Nippo_1.0
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 76.0x
Sequencing Technology :: Oxford Nanopore PromethION; Illumina
HiSeq; Omni-C
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Nippostrongylus brasiliensis"
/mol_type="genomic DNA"
/strain="MIMR"
/db_xref="taxon:27835"
/chromosome="IV"
/sex="pooled male and female"
/tissue_type="Whole animal"
/dev_stage="Adults"
/geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
School of Medicine, Riverside, CA"
/collection_date="2021/2022"
protein /locus_tag="Q1695_007711"
/note="NIPPO_CHRIV.G11551.T2"
intron_pos 39:0 (1/6)
intron_pos 80:0 (2/6)
intron_pos 134:2 (3/6)
intron_pos 163:1 (4/6)
intron_pos 183:0 (5/6)
intron_pos 230:0 (6/6)
BEGIN
1 MENVEATSNI RILGAFLILI PTVIGLLLHV LLATSLFTGW KKFRENGFYV ITVQLQLCDV
61 CALLLDVYIA FPLTLTGVQY MGDNVPLYYG PLFFQGIAFN GIFALSFFLS ANRFLLFIYP
121 ALHNRLFTTL GTRIMSLVVW IHAFVVVGLS NVFGCVKQFS KDDFYFWYNC SNRVPGKLHY
181 MDLMNYESYA IVCGMIVMYV VIYIKLKAAG YNRNWSLTAV KQEMKYLMQT VLIGVLLVAE
241 ICAFVTVPFL GISGYGRFYL NIFLNLIEIA NNVVTPIVLL LFNKEIREQL VLTLSSQLHS
301 TANVKTISIR KFSVILL
//