LOCUS       WKY08363.1              1528 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-5188
PROTEIN_ID  WKY08363.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_007690"
                     /note="NIPPO_CHRIV.G11530.T2"
     intron_pos      19:0 (1/37)
     intron_pos      64:0 (2/37)
     intron_pos      99:1 (3/37)
     intron_pos      139:2 (4/37)
     intron_pos      167:0 (5/37)
     intron_pos      228:1 (6/37)
     intron_pos      257:1 (7/37)
     intron_pos      307:2 (8/37)
     intron_pos      362:0 (9/37)
     intron_pos      404:2 (10/37)
     intron_pos      439:1 (11/37)
     intron_pos      479:1 (12/37)
     intron_pos      518:0 (13/37)
     intron_pos      581:1 (14/37)
     intron_pos      611:0 (15/37)
     intron_pos      636:0 (16/37)
     intron_pos      660:0 (17/37)
     intron_pos      694:1 (18/37)
     intron_pos      743:2 (19/37)
     intron_pos      804:0 (20/37)
     intron_pos      840:0 (21/37)
     intron_pos      892:0 (22/37)
     intron_pos      915:2 (23/37)
     intron_pos      938:2 (24/37)
     intron_pos      991:1 (25/37)
     intron_pos      1063:1 (26/37)
     intron_pos      1094:0 (27/37)
     intron_pos      1129:0 (28/37)
     intron_pos      1179:1 (29/37)
     intron_pos      1221:1 (30/37)
     intron_pos      1266:2 (31/37)
     intron_pos      1305:0 (32/37)
     intron_pos      1333:2 (33/37)
     intron_pos      1359:0 (34/37)
     intron_pos      1405:0 (35/37)
     intron_pos      1457:1 (36/37)
     intron_pos      1484:1 (37/37)
BEGIN
        1 MKVASVPDIK VSVAEVCEVR GSGLESHELL ALAAAAAEIL PPCPRGTVFD PENVFISSKG
       61 TVEIHTVPQS SVDECFVPPE WSKNEDDPGA AAVYCMGAVL RAAGAEEAAD VDLFSLVNIL
      121 TVAMVGTRPT AHRMGLMAKN QLRGRDAKVC LITIYEEIMG DEETNQLDDV DFSMDEDDDI
      181 GALLGVPPNG RLANGNLLPT VTVTTAAQPT VKKAVDYFDE DEEMESRGHS ASTSSGRSTQ
      241 KDTSPFFVDH DMESKKDEPR TSTPPSSSSH RHSLGSFGSP IPPTASTRLD ETYIEEHSID
      301 LEVSLDRSLD ANQATSSKVL PEKAKTNGEV SRTIISPIVS PSESSSKSRL PRWPTSYEDD
      361 PAPLPAKRDK ARKALPDKTS MIGTSTESDG EVRRPKPHAP LLHKFSSSDE DIVQARIDDD
      421 DDDEPPIPPK RRSYFDEIVA ERDEEPSKSE LDTVWKRPNQ HDHHRSPMSS PPSTSQTEDA
      481 DDSSPTRTAA PVAPVPGFHA SEREDLDRTH VDAVVITKNR PEPRGTAAES TEDETPIEAA
      541 FEDAIRERRR GSVPPIADGI LTPPTPPPPP LSAPAAVVRQ DSPHFERRNS LVPARISGRQ
      601 SSRSMRGKRK TRAVPEFYDH SRHPSIRLKA PCAKKKKLTL YRVEQADVEV ELLNGQRIEV
      661 SCRTDAVTRD IFSLVVQHMN INEHVFFGLS FMKDGEHYFL EDHQRLEKFA PAGWKSAHRN
      721 GLRTHFVLYL RFRFYPQVLD FIKTDVTMHE LYLQVRHDVI EERIQPRRDA AYELAALALQ
      781 AEFGNRPPPV IHDYFDNQHY LPQRYCTTDD PKRLQSVLAE MHGHYVGTKP LDAEHKFIQI
      841 CQRHRDFGAH LHRVFRNKPS GAHGAAPFDP DTGAALWIAI MPRGIAIYEE QGSVREQLAE
      901 HLWQDTQTLQ FDRKKFVVIA VEGNQQTESI FYTDHHTKSA YFVKFSASQH RFMMRMRQWK
      961 STLRHENTIQ AMPDVCVEGR EPPPPLKQTS VDDDVSMMDD ESSPLEAAAS IFAKMPAANP
     1021 ADNATPPPRI ATASRTQSLD TKDKSSSAKE RSSAERSAHN ETNATIERFE MVTRSDSSDG
     1081 DAAGMRFEVN LVKDKASGLG LTLVDGNLNG VKGVYVKSVA ENGAGMRAGL CVGDRLLGVD
     1141 GMSLEGGDRH RAVELVRQCG DTVCMEIARL DGVVRHEKTQ RSGDNTMKLS ALGPSGLLTV
     1201 SPQKALGMFL LSNFLHFFAC RVSRTPPPPR RAANQRQRAV SDFGAIGDTL PALDSDNVIN
     1261 IKAISGLHLD ESDEEQGEYR LPTTSMYSFE NHYDDDSPTS PSDKSFDDTI SPMNASRHIV
     1321 PSAEGKRKYR YARKSNLEWT DELEEVGEEN ETDDDIVDVQ LERNEMGSLG VQIASVSGRV
     1381 CIKQLTAEPA ISHPDLRVGD ALIYVNGEPV ANKSHQEVVS MLRSGGNLVT LGLRREPQKN
     1441 GNIITAVLEK KPEGSLGLSL AKRTGSDGIF IRMIAANSAA AMEGSLRVGD RLLSLDGESV
     1501 TDLTPTAILE RLRLIQGAVH ITVSRDPH
//