LOCUS       WKY08339.1               600 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-5164
PROTEIN_ID  WKY08339.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_007678"
                     /note="NIPPO_CHRIV.G11518.T1"
     intron_pos      86:0 (1/8)
     intron_pos      184:0 (2/8)
     intron_pos      259:0 (3/8)
     intron_pos      347:0 (4/8)
     intron_pos      393:0 (5/8)
     intron_pos      431:2 (6/8)
     intron_pos      493:0 (7/8)
     intron_pos      575:2 (8/8)
BEGIN
        1 MQFATLLLVA GVAFAQYDTQ PSGYGDNNPK HVQYVAGKSP RNKPVDYTRG GASDSPRGDS
       61 NVIGNRFKGQ DLGQANTQGQ SSLQQGGDQA NIGMNTNTIN VVQTNTQTVS HDAPSSYRPV
      121 YAGAGATYQG PNFPGSLIKD NTFNTQDLGQ LNNQGQSSVQ KGGDQTNVGA NNNQVNVGQA
      181 NNQGGPVYSG KPAYDAPAYG GNPQYGGAAG FNFFGNNVFA QNLGQTSSQG QANAQVGGAQ
      241 TNAGQNQNAI NVGQSNNQGG NGNYGGNYKP SYDAPAYGGQ ASSYGAILIP INPSYGPGSL
      301 VKGNNFDLQN LGQTSNQGQS NAQVGGAQTN LGANQNAVNV GQANNQGGDA GYGKPSYDAP
      361 SYGAGYNAGG AIYVPDFSNF IKNNVNSQNL GQTNAQGQSN VQQGGDQTNV GVNTNAVNVG
      421 QSNNQGAGPA KGYDAPRYGG YNPGSFFAGN NIFAQNLGQT SNQGQTNAQI GGAQTNVGMN
      481 ANTVSVGQDN NQGGNAGKPS YDAPRYGGSG YFKGAAALPD LDNVVGNNIF AQNLGQTSNQ
      541 GQSNAQIGGA QTNVGANQNE VNVGQSNNQG AGPAKGYDAP RGKYVSPPAQ ETGGYKSRRH
//